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The map label for this gene is dctS [H]

Identifier: 188586188

GI number: 188586188

Start: 1650817

End: 1651653

Strand: Reverse

Name: dctS [H]

Synonym: Nther_1570

Alternate gene names: 188586188

Gene position: 1651653-1650817 (Counterclockwise)

Preceding gene: 188586191

Following gene: 188586187

Centisome position: 52.18

GC content: 29.27

Gene sequence:

>837_bases
ATGAATCATAAAAAATTTATTACCATATCTTTAATTCAAACTATGATAATTGTGGTTATTACTGTTATATTAATTTCATC
TGAACTCTTTAAACTTGAACAAAATTGGCTTTGGCTTTATTTTTTGATTATGACTGTTGTGATAATTGGAGCACTAAATA
TATATTTCTTATTTAGAATAGAACGATCAATGAGTAAAGAAAAAGAGCTAGCTATGTTACGAACAGATCTTAAAAATACT
GAATCCTTAATTAACCTGTTAAGACAACAAGGTCACGATCATATTAATCATATCCAAACGGTAACATCTATGCTGATTTT
AGAGGAATATGATACGGCTAAAGATTACTTACAAGGTATAGTTCAGAACTATCGTTTTACTGGAGATTTTTTGAGATTAG
GAAATCCAACATTAACTGCCCTAGTAAATACTAAAAAAGAACTGGCCAATAAAAATGGGCTTGAATTTATAGTAGAAAAA
TATTGTAGAGTTAAGCTAAACAAGATAAAACCCTGGGATATTTCAAGTATTGTAGGGAATTTAATAGAAAATGCCATGGA
ACATGTGTTAAGTAATAAAGATCTACCGCAAAAAATTTATTTCAATTTAGAGCACACCGAGAATATGAAAGGGTATCGGT
TTAAAATAAGCAATCCTTACAATGGGGAATTGAATGAAATCAAGAACTTTTTTGCACAAGGGTTTTCTAGTAAAAAAGCA
AGTGGTAGGGGGTATGGATTAAGTATAGTGAAAAATATAGTTGATTCTTATAATGGTAAAATAGATGTGTTTAAAGAAAA
CGGCAATATTACATTTCTCGTGGAGTTAATGGAATAA

Upstream 100 bases:

>100_bases
CACACATCATGTTTAATATACTAGTAAACATTGGAAGGGTTTTTTAGAAAAATTTCGAAGTATATATTAAATATATTAAT
ATCGGGGTCTGATGTGGCTT

Downstream 100 bases:

>100_bases
AAGATCTAAACAGAAGAGTGGTGTTGTTAACAATGATTAATGTATTAATTTGTGATGATGATTTATACACATCAAAAGTA
TTAAAAAAAGTTATTGAGGA

Product: signal transduction histidine kinase regulating citrate/malate metabolism

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MNHKKFITISLIQTMIIVVITVILISSELFKLEQNWLWLYFLIMTVVIIGALNIYFLFRIERSMSKEKELAMLRTDLKNT
ESLINLLRQQGHDHINHIQTVTSMLILEEYDTAKDYLQGIVQNYRFTGDFLRLGNPTLTALVNTKKELANKNGLEFIVEK
YCRVKLNKIKPWDISSIVGNLIENAMEHVLSNKDLPQKIYFNLEHTENMKGYRFKISNPYNGELNEIKNFFAQGFSSKKA
SGRGYGLSIVKNIVDSYNGKIDVFKENGNITFLVELME

Sequences:

>Translated_278_residues
MNHKKFITISLIQTMIIVVITVILISSELFKLEQNWLWLYFLIMTVVIIGALNIYFLFRIERSMSKEKELAMLRTDLKNT
ESLINLLRQQGHDHINHIQTVTSMLILEEYDTAKDYLQGIVQNYRFTGDFLRLGNPTLTALVNTKKELANKNGLEFIVEK
YCRVKLNKIKPWDISSIVGNLIENAMEHVLSNKDLPQKIYFNLEHTENMKGYRFKISNPYNGELNEIKNFFAQGFSSKKA
SGRGYGLSIVKNIVDSYNGKIDVFKENGNITFLVELME
>Mature_278_residues
MNHKKFITISLIQTMIIVVITVILISSELFKLEQNWLWLYFLIMTVVIIGALNIYFLFRIERSMSKEKELAMLRTDLKNT
ESLINLLRQQGHDHINHIQTVTSMLILEEYDTAKDYLQGIVQNYRFTGDFLRLGNPTLTALVNTKKELANKNGLEFIVEK
YCRVKLNKIKPWDISSIVGNLIENAMEHVLSNKDLPQKIYFNLEHTENMKGYRFKISNPYNGELNEIKNFFAQGFSSKKA
SGRGYGLSIVKNIVDSYNGKIDVFKENGNITFLVELME

Specific function: Member of the two-component regulatory system dctS/dctR. Probably activates dctR by phosphorylation. Essential for expression of dctP [H]

COG id: COG3290

COG function: function code T; Signal transduction histidine kinase regulating citrate/malate metabolism

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR000014
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR016120
- InterPro:   IPR005467
- InterPro:   IPR016121 [H]

Pfam domain/function: PF02518 HATPase_c; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 32230; Mature: 32230

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHKKFITISLIQTMIIVVITVILISSELFKLEQNWLWLYFLIMTVVIIGALNIYFLFRI
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERSMSKEKELAMLRTDLKNTESLINLLRQQGHDHINHIQTVTSMLILEEYDTAKDYLQGI
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VQNYRFTGDFLRLGNPTLTALVNTKKELANKNGLEFIVEKYCRVKLNKIKPWDISSIVGN
HHHCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
LIENAMEHVLSNKDLPQKIYFNLEHTENMKGYRFKISNPYNGELNEIKNFFAQGFSSKKA
HHHHHHHHHHCCCCCCHHHEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCC
SGRGYGLSIVKNIVDSYNGKIDVFKENGNITFLVELME
CCCCCHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECC
>Mature Secondary Structure
MNHKKFITISLIQTMIIVVITVILISSELFKLEQNWLWLYFLIMTVVIIGALNIYFLFRI
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERSMSKEKELAMLRTDLKNTESLINLLRQQGHDHINHIQTVTSMLILEEYDTAKDYLQGI
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VQNYRFTGDFLRLGNPTLTALVNTKKELANKNGLEFIVEKYCRVKLNKIKPWDISSIVGN
HHHCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
LIENAMEHVLSNKDLPQKIYFNLEHTENMKGYRFKISNPYNGELNEIKNFFAQGFSSKKA
HHHHHHHHHHCCCCCCHHHEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCC
SGRGYGLSIVKNIVDSYNGKIDVFKENGNITFLVELME
CCCCCHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]