| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is pknB [H]
Identifier: 188586143
GI number: 188586143
Start: 1597480
End: 1598964
Strand: Reverse
Name: pknB [H]
Synonym: Nther_1520
Alternate gene names: 188586143
Gene position: 1598964-1597480 (Counterclockwise)
Preceding gene: 188586144
Following gene: 188586140
Centisome position: 50.51
GC content: 25.12
Gene sequence:
>1485_bases ATGAATTATACTGAATACATAAAATTGTTAAGATATTTTGATAATTATCTTTGGGATAAAAAAGTTGGAGAAACCAATTA TAATTATAATGGATTAATATTAGATGCTTATTTCGAACTGTCTATCTTAAGTATTGATTACCTTGATATTGAAGATTTTT TTGATTGTAATGGAAAATTTAAGTACGATGAAACTAAATTACTTTCCGAACAATTTAAAGAAGTAAAAAATCCTGATAAA AAATTAAAGCTTATAGAAAATATTTTAAATATATTTAATTTATCCTCATATAATACAGAGGTTTCAGAAACTATTAATTC TAAAACTTTAGTATTTTTAAAAAGAAACAGAATAATGATCAATAATTTTTCTAACGGTTTTTTGGCATTGAAATATAATA ACATTGTTGATGAAGGTTCTTATTGTTCTATAATCAAAGTTCATGAGGGAATTTTAAGAAAAGAGTTGAAACCATTTTAT CGAGAAAATCCAGATTTTCAAAAGAGGATGAAATATGAATATGAAAATATGTTAAAGTTACATGACTGTCCTTACGTTTT AAATGTATACGGTTACGACTCAGAAACCCATTCTTATTTAATGGAAGAAGCTGATATGAATTTACATGAATATATAACAA CTGAAATAAATATTCCATTTGAGCAAAAAATGAAGATTATATATGATGTATTAAATGGAATGAAGTACGCTCATAATCAT AGTATAATTCATAGAGATTTACACCTTGGCAATATATTAAAATTACGAAATGACTTCGTATTATGTGATTTCGGATTGAG TAAAGATGAATCAATAGAGAGAAGTCTAAAATCATCTTCAACAGAGAAGAATAATCATATATTTCTTGATCCATTAGCGA TTGGTGATTTCAAGAAGTTAGATAAAAAAAGTGATATTTACTCTTTAGGAAAAGTCATAGATTATGTTTTTACTGCAAGT GTTGATGAATCTAAATCACAGCATTTATTCACTTTTGTTGTTGAGAAATGTACTAGTAGGAATAAGGAAAAAAGGTATGA AACAGTTGATCAGGTATTAAGTGATATTGAGTTGAAATTAAAAGAGCAAAATAGAGAACTGGATAAGAAAAAAGTAGATA ATAAAATACATAAAGGTATATTTGATATGCAAGTTAGTGATTATATTTTAAGATTAGTACGAAGTGATAGACTATGTGAT TATTTAGTCAAACATAAATTATATTCATTTGGTAACATTATAGTTCAATTTGAAAAAACAGATCAAATTAATATACTTCA AACAATTAATTATGGCTATATTGATGCCACAGGATTCGGTCAATTTCATAATTACGATATTTTTGCAAGAATTGCTTATT TTGTTTGTTTGAATACTGATGAATCTAAAATTTTTTCTATAGCAAAAGATATTTTGGAAGGTTGTGCAGAATATAGGTAT AACGCTGAAGATTATCTTGATGAAATAGAAAAACTCAATTTATAA
Upstream 100 bases:
>100_bases TATGAATTTAGAAACATAAAAAGGTAACTTTACCAAACTAAATAGGTAAAAGGTGAATCCTCAAATCACCTAGGTAGTAC GAAAGTGAGGAGTTTTAATT
Downstream 100 bases:
>100_bases TATATATAATAGTTAGTGAAAATTGCTATAGAATGTAAAATTACTCAGTCTATTTCTAATAATTTTTTGCAACGTTATAT TAATTTGCAAAACAAAGGGC
Product: serine/threonine protein kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MNYTEYIKLLRYFDNYLWDKKVGETNYNYNGLILDAYFELSILSIDYLDIEDFFDCNGKFKYDETKLLSEQFKEVKNPDK KLKLIENILNIFNLSSYNTEVSETINSKTLVFLKRNRIMINNFSNGFLALKYNNIVDEGSYCSIIKVHEGILRKELKPFY RENPDFQKRMKYEYENMLKLHDCPYVLNVYGYDSETHSYLMEEADMNLHEYITTEINIPFEQKMKIIYDVLNGMKYAHNH SIIHRDLHLGNILKLRNDFVLCDFGLSKDESIERSLKSSSTEKNNHIFLDPLAIGDFKKLDKKSDIYSLGKVIDYVFTAS VDESKSQHLFTFVVEKCTSRNKEKRYETVDQVLSDIELKLKEQNRELDKKKVDNKIHKGIFDMQVSDYILRLVRSDRLCD YLVKHKLYSFGNIIVQFEKTDQINILQTINYGYIDATGFGQFHNYDIFARIAYFVCLNTDESKIFSIAKDILEGCAEYRY NAEDYLDEIEKLNL
Sequences:
>Translated_494_residues MNYTEYIKLLRYFDNYLWDKKVGETNYNYNGLILDAYFELSILSIDYLDIEDFFDCNGKFKYDETKLLSEQFKEVKNPDK KLKLIENILNIFNLSSYNTEVSETINSKTLVFLKRNRIMINNFSNGFLALKYNNIVDEGSYCSIIKVHEGILRKELKPFY RENPDFQKRMKYEYENMLKLHDCPYVLNVYGYDSETHSYLMEEADMNLHEYITTEINIPFEQKMKIIYDVLNGMKYAHNH SIIHRDLHLGNILKLRNDFVLCDFGLSKDESIERSLKSSSTEKNNHIFLDPLAIGDFKKLDKKSDIYSLGKVIDYVFTAS VDESKSQHLFTFVVEKCTSRNKEKRYETVDQVLSDIELKLKEQNRELDKKKVDNKIHKGIFDMQVSDYILRLVRSDRLCD YLVKHKLYSFGNIIVQFEKTDQINILQTINYGYIDATGFGQFHNYDIFARIAYFVCLNTDESKIFSIAKDILEGCAEYRY NAEDYLDEIEKLNL >Mature_494_residues MNYTEYIKLLRYFDNYLWDKKVGETNYNYNGLILDAYFELSILSIDYLDIEDFFDCNGKFKYDETKLLSEQFKEVKNPDK KLKLIENILNIFNLSSYNTEVSETINSKTLVFLKRNRIMINNFSNGFLALKYNNIVDEGSYCSIIKVHEGILRKELKPFY RENPDFQKRMKYEYENMLKLHDCPYVLNVYGYDSETHSYLMEEADMNLHEYITTEINIPFEQKMKIIYDVLNGMKYAHNH SIIHRDLHLGNILKLRNDFVLCDFGLSKDESIERSLKSSSTEKNNHIFLDPLAIGDFKKLDKKSDIYSLGKVIDYVFTAS VDESKSQHLFTFVVEKCTSRNKEKRYETVDQVLSDIELKLKEQNRELDKKKVDNKIHKGIFDMQVSDYILRLVRSDRLCD YLVKHKLYSFGNIIVQFEKTDQINILQTINYGYIDATGFGQFHNYDIFARIAYFVCLNTDESKIFSIAKDILEGCAEYRY NAEDYLDEIEKLNL
Specific function: Unknown
COG id: COG0515
COG function: function code RTKL; Serine/threonine protein kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR005543 - InterPro: IPR000719 - InterPro: IPR017441 - InterPro: IPR017442 - InterPro: IPR008271 - InterPro: IPR002290 [H]
Pfam domain/function: PF03793 PASTA; PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 58498; Mature: 58498
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYTEYIKLLRYFDNYLWDKKVGETNYNYNGLILDAYFELSILSIDYLDIEDFFDCNGKF CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEECHHHHHCCCCCC KYDETKLLSEQFKEVKNPDKKLKLIENILNIFNLSSYNTEVSETINSKTLVFLKRNRIMI CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEECCEEEE NNFSNGFLALKYNNIVDEGSYCSIIKVHEGILRKELKPFYRENPDFQKRMKYEYENMLKL EECCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHH HDCPYVLNVYGYDSETHSYLMEEADMNLHEYITTEINIPFEQKMKIIYDVLNGMKYAHNH CCCCEEEEEECCCCHHHHHHHHHHCCCHHHEEEEEECCCHHHHHHHHHHHHHCCHHHCCC SIIHRDLHLGNILKLRNDFVLCDFGLSKDESIERSLKSSSTEKNNHIFLDPLAIGDFKKL CEEEECCCCCHHHEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCHHHH DKKSDIYSLGKVIDYVFTASVDESKSQHLFTFVVEKCTSRNKEKRYETVDQVLSDIELKL CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KEQNRELDKKKVDNKIHKGIFDMQVSDYILRLVRSDRLCDYLVKHKLYSFGNIIVQFEKT HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECC DQINILQTINYGYIDATGFGQFHNYDIFARIAYFVCLNTDESKIFSIAKDILEGCAEYRY CCEEEEEECCCCEEECCCCCCCCCCHHHHEEHHHHEECCCHHHHHHHHHHHHHHHHHCCC NAEDYLDEIEKLNL CHHHHHHHHHHCCC >Mature Secondary Structure MNYTEYIKLLRYFDNYLWDKKVGETNYNYNGLILDAYFELSILSIDYLDIEDFFDCNGKF CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEECHHHHHCCCCCC KYDETKLLSEQFKEVKNPDKKLKLIENILNIFNLSSYNTEVSETINSKTLVFLKRNRIMI CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEECCEEEE NNFSNGFLALKYNNIVDEGSYCSIIKVHEGILRKELKPFYRENPDFQKRMKYEYENMLKL EECCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHH HDCPYVLNVYGYDSETHSYLMEEADMNLHEYITTEINIPFEQKMKIIYDVLNGMKYAHNH CCCCEEEEEECCCCHHHHHHHHHHCCCHHHEEEEEECCCHHHHHHHHHHHHHCCHHHCCC SIIHRDLHLGNILKLRNDFVLCDFGLSKDESIERSLKSSSTEKNNHIFLDPLAIGDFKKL CEEEECCCCCHHHEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCHHHH DKKSDIYSLGKVIDYVFTASVDESKSQHLFTFVVEKCTSRNKEKRYETVDQVLSDIELKL CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KEQNRELDKKKVDNKIHKGIFDMQVSDYILRLVRSDRLCDYLVKHKLYSFGNIIVQFEKT HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECC DQINILQTINYGYIDATGFGQFHNYDIFARIAYFVCLNTDESKIFSIAKDILEGCAEYRY CCEEEEEECCCCEEECCCCCCCCCCHHHHEEHHHHEECCCHHHHHHHHHHHHHHHHHCCC NAEDYLDEIEKLNL CHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969512; 11234002 [H]