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The map label for this gene is korB [H]

Identifier: 188586109

GI number: 188586109

Start: 1555273

End: 1556094

Strand: Direct

Name: korB [H]

Synonym: Nther_1483

Alternate gene names: 188586109

Gene position: 1555273-1556094 (Clockwise)

Preceding gene: 188586108

Following gene: 188586110

Centisome position: 49.13

GC content: 40.88

Gene sequence:

>822_bases
ATGAGCACTCATCTTAGAAAATATCTGCGCCTGGATAAAATACCACATATTTGGTGTCCAGGTTGCGGGCACGGAATTAT
TTTAAATAGTTTAATAAGGGGCATCCACGAAGTTGGCCTAAAACAGGAAAACACGGTAATTGTTTCAGGAATCGGCTGTT
CTTCCCGGGCACCAGGTTATCTGAATTTCAACACTCTTCATACTACTCACGGCAGGGCTTTAGCCTTTGCCACAGGTGTG
AAACACTCCAATCCAGATTTGAATGTGATAGTTCTTACTGGTGATGGAGATAGTGCGGCCATTGGTGGAAATCATTTAAT
CCATGCTGCTCGGAGAAATATAAATATTACCACAATTGTCTTTAACAATAATATTTACGGAATGACTAGTGGACAGTATT
CTCCAATGACTCCGACAGATGCCATAGCAACCACTTCCCCCTACGGAAATGTAGAAAAGTCTTTTGACCTCTGCAATATG
GTGAAATCAGCAGGAGCCACTTTCGTAGGTCGGGGAGCCACCTTTAATACTAAACAATTAATACAGCTTGTTTCAGGAGC
CCTCAGTCATAATGGCTTTTCCTTTGTAGAAGCTTTAAGCCAGTGTCCCACATATTACGGTAGAAGAAATAATTTAAAAT
CGGCTATTGATATGTTGAAATGGCAAAAAGATAACTCTGTCAGTGTCAAGGCTTATGATAAACTTCCGGAAGAAAAGAAA
GAGGGTAAAATTGTACTAGGTGAACTCTTCCGTGACGATTCCATCCCAGAATACACTGACAGGTATGCGGAAATGGTCAA
AAATGTACAGAAAAGGAGTTGA

Upstream 100 bases:

>100_bases
GTGTCGGTACCGATCAACAAGTAGAGGGAGTAAATCGAGTAGATACTCACTTGATTACTCCACAGGAAATAATTAGCACT
GTAGAAAGGGAGGAAGGATA

Downstream 100 bases:

>100_bases
GAGTATGAGTAGATGGGAGCTAAGATTAAGTGGTTCAGGTGGCCAAGGACTAATTTTATCAGGTATCATTTTAGCTTCTG
CTGCCACAAAACAAGGAAAA

Product: 2-oxoglutarate ferredoxin oxidoreductase, beta subunit

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase beta chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit beta [H]

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MSTHLRKYLRLDKIPHIWCPGCGHGIILNSLIRGIHEVGLKQENTVIVSGIGCSSRAPGYLNFNTLHTTHGRALAFATGV
KHSNPDLNVIVLTGDGDSAAIGGNHLIHAARRNINITTIVFNNNIYGMTSGQYSPMTPTDAIATTSPYGNVEKSFDLCNM
VKSAGATFVGRGATFNTKQLIQLVSGALSHNGFSFVEALSQCPTYYGRRNNLKSAIDMLKWQKDNSVSVKAYDKLPEEKK
EGKIVLGELFRDDSIPEYTDRYAEMVKNVQKRS

Sequences:

>Translated_273_residues
MSTHLRKYLRLDKIPHIWCPGCGHGIILNSLIRGIHEVGLKQENTVIVSGIGCSSRAPGYLNFNTLHTTHGRALAFATGV
KHSNPDLNVIVLTGDGDSAAIGGNHLIHAARRNINITTIVFNNNIYGMTSGQYSPMTPTDAIATTSPYGNVEKSFDLCNM
VKSAGATFVGRGATFNTKQLIQLVSGALSHNGFSFVEALSQCPTYYGRRNNLKSAIDMLKWQKDNSVSVKAYDKLPEEKK
EGKIVLGELFRDDSIPEYTDRYAEMVKNVQKRS
>Mature_272_residues
STHLRKYLRLDKIPHIWCPGCGHGIILNSLIRGIHEVGLKQENTVIVSGIGCSSRAPGYLNFNTLHTTHGRALAFATGVK
HSNPDLNVIVLTGDGDSAAIGGNHLIHAARRNINITTIVFNNNIYGMTSGQYSPMTPTDAIATTSPYGNVEKSFDLCNMV
KSAGATFVGRGATFNTKQLIQLVSGALSHNGFSFVEALSQCPTYYGRRNNLKSAIDMLKWQKDNSVSVKAYDKLPEEKKE
GKIVLGELFRDDSIPEYTDRYAEMVKNVQKRS

Specific function: Unknown

COG id: COG1013

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011766 [H]

Pfam domain/function: PF02775 TPP_enzyme_C [H]

EC number: =1.2.7.3 [H]

Molecular weight: Translated: 29946; Mature: 29815

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTHLRKYLRLDKIPHIWCPGCGHGIILNSLIRGIHEVGLKQENTVIVSGIGCSSRAPGY
CCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCE
LNFNTLHTTHGRALAFATGVKHSNPDLNVIVLTGDGDSAAIGGNHLIHAARRNINITTIV
EEECEEECCCCCEEEEEECCCCCCCCEEEEEEECCCCCCEECCHHHHHHHHCCCEEEEEE
FNNNIYGMTSGQYSPMTPTDAIATTSPYGNVEKSFDLCNMVKSAGATFVGRGATFNTKQL
ECCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHH
IQLVSGALSHNGFSFVEALSQCPTYYGRRNNLKSAIDMLKWQKDNSVSVKAYDKLPEEKK
HHHHHHHHCCCCHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCCCCCEEEEEHHCCCCHHH
EGKIVLGELFRDDSIPEYTDRYAEMVKNVQKRS
CCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STHLRKYLRLDKIPHIWCPGCGHGIILNSLIRGIHEVGLKQENTVIVSGIGCSSRAPGY
CHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCE
LNFNTLHTTHGRALAFATGVKHSNPDLNVIVLTGDGDSAAIGGNHLIHAARRNINITTIV
EEECEEECCCCCEEEEEECCCCCCCCEEEEEEECCCCCCEECCHHHHHHHHCCCEEEEEE
FNNNIYGMTSGQYSPMTPTDAIATTSPYGNVEKSFDLCNMVKSAGATFVGRGATFNTKQL
ECCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHH
IQLVSGALSHNGFSFVEALSQCPTYYGRRNNLKSAIDMLKWQKDNSVSVKAYDKLPEEKK
HHHHHHHHCCCCHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCCCCCEEEEEHHCCCCHHH
EGKIVLGELFRDDSIPEYTDRYAEMVKNVQKRS
CCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9108258 [H]