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The map label for this gene is ymdB [H]

Identifier: 188586102

GI number: 188586102

Start: 1549540

End: 1550331

Strand: Direct

Name: ymdB [H]

Synonym: Nther_1476

Alternate gene names: 188586102

Gene position: 1549540-1550331 (Clockwise)

Preceding gene: 188586101

Following gene: 188586103

Centisome position: 48.95

GC content: 34.34

Gene sequence:

>792_bases
ATGAAAGATGTAAAAGTGCTAATAATAGGGGATATAGTTGGTAGACCTGGAAGATATTGCCTGAGAGATTTGTTACCTAA
AATTCAGGAGAACTATGAAATTGATTTTACTATTGCTAATGGGGAGAATGCTGCAGCTGGCAAAGGAATCACTAAAAAGG
CTATGAATAGCTTATTAGAAAGTGGAGTTGACCTAATAACCTCGGGTAACCATATCTGGGATAAAAAAGAAATCTTTAAA
TTTATTGACGAAGAGAGAAGTATAATTAGACCTGCTAACTTTCCACCTGGTAATCCGGGAAATGGTCATCAAATTATAGA
AACAAATTCAGTTAATATCGGTGTCATCAATTTATCTGGAAGAGTTTTTATGTCTTCTATAGATTGTCCCTTTCAAAAAG
GAAAAGAAATTATTGACAAAATTACCCATGATTGTAATATAATAATTATAGATTTTCATGCAGAAGCAACTTCTGAAAAA
ATGGCCTTAGCACGTTATTTTGATGGTAAAGTATCTGCAATTATAGGTACTCATACTCATATCCAAACTGCTGATGAACA
AGTACTACCAGCTGGGACTGGATATATCACCGATGTAGGAATGACTGGACCTTACGAATCTATTTTAGGTGTTGAGTCTC
AGGCAGTAATTGATAATTTTATAACGGGGATTCCTACAAAATTTGAAGTAGCCGAAGGGAAAGTACAATTTAATGGTGTG
GTAGTTCACTTGGACTCTGATAACGGTATCTGTAAAAAAATTGAGCGTATCCAGGATTTACATGAATTTTAA

Upstream 100 bases:

>100_bases
AGCTGTAGAATATGCTAAATAAATCATGCATATATAAGTGTCCCTTCGGGGACACTTATTGTATTTGGATTATTTTAGGA
GGATTTAGGAGGATATGAAT

Downstream 100 bases:

>100_bases
ATTTTTTAGATAAAAAAAAGGAATTTTTAGGTTTTTGTAGAAATGAATTCAGCGTAGGAAAAAATACTATAACATATCTT
ATAGGAGGTTTGATCAATGG

Product: metallophosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MKDVKVLIIGDIVGRPGRYCLRDLLPKIQENYEIDFTIANGENAAAGKGITKKAMNSLLESGVDLITSGNHIWDKKEIFK
FIDEERSIIRPANFPPGNPGNGHQIIETNSVNIGVINLSGRVFMSSIDCPFQKGKEIIDKITHDCNIIIIDFHAEATSEK
MALARYFDGKVSAIIGTHTHIQTADEQVLPAGTGYITDVGMTGPYESILGVESQAVIDNFITGIPTKFEVAEGKVQFNGV
VVHLDSDNGICKKIERIQDLHEF

Sequences:

>Translated_263_residues
MKDVKVLIIGDIVGRPGRYCLRDLLPKIQENYEIDFTIANGENAAAGKGITKKAMNSLLESGVDLITSGNHIWDKKEIFK
FIDEERSIIRPANFPPGNPGNGHQIIETNSVNIGVINLSGRVFMSSIDCPFQKGKEIIDKITHDCNIIIIDFHAEATSEK
MALARYFDGKVSAIIGTHTHIQTADEQVLPAGTGYITDVGMTGPYESILGVESQAVIDNFITGIPTKFEVAEGKVQFNGV
VVHLDSDNGICKKIERIQDLHEF
>Mature_263_residues
MKDVKVLIIGDIVGRPGRYCLRDLLPKIQENYEIDFTIANGENAAAGKGITKKAMNSLLESGVDLITSGNHIWDKKEIFK
FIDEERSIIRPANFPPGNPGNGHQIIETNSVNIGVINLSGRVFMSSIDCPFQKGKEIIDKITHDCNIIIIDFHAEATSEK
MALARYFDGKVSAIIGTHTHIQTADEQVLPAGTGYITDVGMTGPYESILGVESQAVIDNFITGIPTKFEVAEGKVQFNGV
VVHLDSDNGICKKIERIQDLHEF

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28882; Mature: 28882

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDVKVLIIGDIVGRPGRYCLRDLLPKIQENYEIDFTIANGENAAAGKGITKKAMNSLLE
CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH
SGVDLITSGNHIWDKKEIFKFIDEERSIIRPANFPPGNPGNGHQIIETNSVNIGVINLSG
CCCCEEECCCCCCCHHHHHHHHHCCHHEECCCCCCCCCCCCCCEEEEECCEEEEEEEECC
RVFMSSIDCPFQKGKEIIDKITHDCNIIIIDFHAEATSEKMALARYFDGKVSAIIGTHTH
EEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCE
IQTADEQVLPAGTGYITDVGMTGPYESILGVESQAVIDNFITGIPTKFEVAEGKVQFNGV
EECCCCCCCCCCCCEEEECCCCCCHHHHHCCCHHHHHHHHHHCCCCEEEEECCEEEECEE
VVHLDSDNGICKKIERIQDLHEF
EEEECCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKDVKVLIIGDIVGRPGRYCLRDLLPKIQENYEIDFTIANGENAAAGKGITKKAMNSLLE
CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH
SGVDLITSGNHIWDKKEIFKFIDEERSIIRPANFPPGNPGNGHQIIETNSVNIGVINLSG
CCCCEEECCCCCCCHHHHHHHHHCCHHEECCCCCCCCCCCCCCEEEEECCEEEEEEEECC
RVFMSSIDCPFQKGKEIIDKITHDCNIIIIDFHAEATSEKMALARYFDGKVSAIIGTHTH
EEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCE
IQTADEQVLPAGTGYITDVGMTGPYESILGVESQAVIDNFITGIPTKFEVAEGKVQFNGV
EECCCCCCCCCCCCEEEECCCCCCHHHHHCCCHHHHHHHHHHCCCCEEEEECCEEEECEE
VVHLDSDNGICKKIERIQDLHEF
EEEECCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]