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The map label for this gene is ribC [H]

Identifier: 188586074

GI number: 188586074

Start: 1515576

End: 1516526

Strand: Direct

Name: ribC [H]

Synonym: Nther_1448

Alternate gene names: 188586074

Gene position: 1515576-1516526 (Clockwise)

Preceding gene: 188586073

Following gene: 188586075

Centisome position: 47.88

GC content: 33.02

Gene sequence:

>951_bases
GTGAAATTAATAAGCGACTTTAACTTAACTAAAGATAATAAAACTAAGAAATTATGGTTAAGCCTGGGTAATTTTGATGG
AGTGCATATTGCACATCAAAAGATTTTACGTGATACAGTCAAAAAAGCTGAAAAATACGATTTTACCCCAGGTATATTAC
TTCTTGAACCTCATCCCGAGATAAAATTCCATAATAAATCTAATTTTTTATTAACAACCTTGGAAGAGAAAATAAATAAA
ATATCTAGTTTAGGTATTCAAGTGGGAGTTCTGAAAGAATTTGACAGGGAATTTGCCGAACTTTCTCCACGGGAATATTC
TAAATGGTTGTGCGATAAATTACGTGTTCAGGGAGTTTCTGTAGGATTTGATTATAGTTTTGGACAAAAAGGAATGGGTT
CTCCTAGTGACTTACAAGATTTTGGGAAACAATTAGGTTTTGAAGTTTCTGTTATAGAACCGATAAAAATTGATGGAGCT
ATCATAGTGAGTAGTCAATTGTGTCGAAAATATATTAGAGAAGGACATATTAATAAAGCTAATCAAATGTTGAGTTCGCC
TTATACGATTTCTGGTACAGTAACAAAGGGTGCGGGACGAGGTGCTAATCTTGGTTTTCCTACAGCTAATATAAAAATAC
CTAAACATAAAATAATTCCCCGCCTGGGTGTTTATTTAGTTAGAGTTGAGGTAAACCAGAATAAATATTGGGGCGTATGT
AATGTCGGTAATAAACCCACTTTTAGTGGGGAAGAATTAATGGCTGAAACTTTCCTACTGGATAACAAACAGGACTTGTA
TAATGAAGAACTTACTGTTTCCTTTTTAGATTTTATCAGGGATGAACGAAAGTTTTTAGATAGTAATACTTTAGTTAGTC
AAGTTAATCGAGATATAAAAATGGCTCGCGATATAATTGCAAATTTAGAAAGCAAGGGCAATTATCAGTGA

Upstream 100 bases:

>100_bases
AGAAGATAGCTCAGGTGATAATTTATTTTTAGGATTAGGTAAAATCACGTCCAGTAATACTTTAAAACCTGAAAAAATTA
TAGCTTAATAGGTGATAATT

Downstream 100 bases:

>100_bases
TTCTTTACATATCCTAGGGGGTATGTTAGAATCTAAAATGCAACCAAAGCTCGGAATAGCGTTCCTCCGGCGTATTCTTG
GCTTTGGGGCTAAAAAATAT

Product: riboflavin biosynthesis protein RibF

Products: NA

Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MKLISDFNLTKDNKTKKLWLSLGNFDGVHIAHQKILRDTVKKAEKYDFTPGILLLEPHPEIKFHNKSNFLLTTLEEKINK
ISSLGIQVGVLKEFDREFAELSPREYSKWLCDKLRVQGVSVGFDYSFGQKGMGSPSDLQDFGKQLGFEVSVIEPIKIDGA
IIVSSQLCRKYIREGHINKANQMLSSPYTISGTVTKGAGRGANLGFPTANIKIPKHKIIPRLGVYLVRVEVNQNKYWGVC
NVGNKPTFSGEELMAETFLLDNKQDLYNEELTVSFLDFIRDERKFLDSNTLVSQVNRDIKMARDIIANLESKGNYQ

Sequences:

>Translated_316_residues
MKLISDFNLTKDNKTKKLWLSLGNFDGVHIAHQKILRDTVKKAEKYDFTPGILLLEPHPEIKFHNKSNFLLTTLEEKINK
ISSLGIQVGVLKEFDREFAELSPREYSKWLCDKLRVQGVSVGFDYSFGQKGMGSPSDLQDFGKQLGFEVSVIEPIKIDGA
IIVSSQLCRKYIREGHINKANQMLSSPYTISGTVTKGAGRGANLGFPTANIKIPKHKIIPRLGVYLVRVEVNQNKYWGVC
NVGNKPTFSGEELMAETFLLDNKQDLYNEELTVSFLDFIRDERKFLDSNTLVSQVNRDIKMARDIIANLESKGNYQ
>Mature_316_residues
MKLISDFNLTKDNKTKKLWLSLGNFDGVHIAHQKILRDTVKKAEKYDFTPGILLLEPHPEIKFHNKSNFLLTTLEEKINK
ISSLGIQVGVLKEFDREFAELSPREYSKWLCDKLRVQGVSVGFDYSFGQKGMGSPSDLQDFGKQLGFEVSVIEPIKIDGA
IIVSSQLCRKYIREGHINKANQMLSSPYTISGTVTKGAGRGANLGFPTANIKIPKHKIIPRLGVYLVRVEVNQNKYWGVC
NVGNKPTFSGEELMAETFLLDNKQDLYNEELTVSFLDFIRDERKFLDSNTLVSQVNRDIKMARDIIANLESKGNYQ

Specific function: Unknown

COG id: COG0196

COG function: function code H; FAD synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribF family [H]

Homologues:

Organism=Escherichia coli, GI1786208, Length=307, Percent_Identity=32.2475570032573, Blast_Score=159, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004821
- InterPro:   IPR015864
- InterPro:   IPR015865
- InterPro:   IPR002606
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]

EC number: =2.7.1.26; =2.7.7.2 [H]

Molecular weight: Translated: 35797; Mature: 35797

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLISDFNLTKDNKTKKLWLSLGNFDGVHIAHQKILRDTVKKAEKYDFTPGILLLEPHPE
CCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
IKFHNKSNFLLTTLEEKINKISSLGIQVGVLKEFDREFAELSPREYSKWLCDKLRVQGVS
EEEECCCCEEEEHHHHHHHHHHHCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHCEEE
VGFDYSFGQKGMGSPSDLQDFGKQLGFEVSVIEPIKIDGAIIVSSQLCRKYIREGHINKA
EECCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCEEECCEEEEHHHHHHHHHHCCCCCHH
NQMLSSPYTISGTVTKGAGRGANLGFPTANIKIPKHKIIPRLGVYLVRVEVNQNKYWGVC
HHHHCCCEEEEEEEECCCCCCCCCCCCCCEEECCHHHHCCCCCEEEEEEEECCCCEEEEE
NVGNKPTFSGEELMAETFLLDNKQDLYNEELTVSFLDFIRDERKFLDSNTLVSQVNRDIK
ECCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
MARDIIANLESKGNYQ
HHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKLISDFNLTKDNKTKKLWLSLGNFDGVHIAHQKILRDTVKKAEKYDFTPGILLLEPHPE
CCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
IKFHNKSNFLLTTLEEKINKISSLGIQVGVLKEFDREFAELSPREYSKWLCDKLRVQGVS
EEEECCCCEEEEHHHHHHHHHHHCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHCEEE
VGFDYSFGQKGMGSPSDLQDFGKQLGFEVSVIEPIKIDGAIIVSSQLCRKYIREGHINKA
EECCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCEEECCEEEEHHHHHHHHHHCCCCCHH
NQMLSSPYTISGTVTKGAGRGANLGFPTANIKIPKHKIIPRLGVYLVRVEVNQNKYWGVC
HHHHCCCEEEEEEEECCCCCCCCCCCCCCEEECCHHHHCCCCCEEEEEEEECCCCEEEEE
NVGNKPTFSGEELMAETFLLDNKQDLYNEELTVSFLDFIRDERKFLDSNTLVSQVNRDIK
ECCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
MARDIIANLESKGNYQ
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9454067; 9108293; 9384377 [H]