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The map label for this gene is rimP

Identifier: 188586066

GI number: 188586066

Start: 1508855

End: 1509319

Strand: Direct

Name: rimP

Synonym: Nther_1440

Alternate gene names: 188586066

Gene position: 1508855-1509319 (Clockwise)

Preceding gene: 188586065

Following gene: 188586067

Centisome position: 47.66

GC content: 36.77

Gene sequence:

>465_bases
ATGACACAACATGATAACATAAGTCAGATTGAAAACATAATTGAACCTGCAGTGCGTGATTTAGGGTACGATTTAGTAGA
TGTGGAATTGATAATGGAAAATCAGAAATGGGTTTTACGTGTATATATAGATCACGGAAAAGGCATTGGGCTAGATGACT
GCGAGTTAGTAAGCAACAGTTTAGATCAATTATTAGACGAACATGACCCAATACCTCATAGCTATGTCCTGGAAGTCTCA
TCCCCAGGAGCAGAGCGACCACTAAAAAAGAAAAAAGATTTTGTGAACTTTGCAGGTAAAAAAGTTCAGATTAAGACCTA
TGTGAAACTTGATGGCCGTAAAAACTTTAAAGGGAAACTCCTGGGCTTAGAAGATGAACATGTTGTTCTTGAAACTTTCA
ATTCCGGCGAAGTTAAAATACCGCTGGATAAGATTGCGAAAGCTAATTTATTATTAGAGCTTTAA

Upstream 100 bases:

>100_bases
CAAATATGATAGAATTACATTGAAATAGACGACAGGACTTTGTCAAGAGTGGGAGCAATCCCACTCTTTCATGTTATGGA
CAATTTTAGGAGGGAGCATA

Downstream 100 bases:

>100_bases
ATATAGGGGGCGAGGAAAATTGAATCGAGAGTTTATTGAAGCCATAGAGGAGATAGAACGGGATAAAGGCATAAACAAAG
ATATTTTATTTGAAGCTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MTQHDNISQIENIIEPAVRDLGYDLVDVELIMENQKWVLRVYIDHGKGIGLDDCELVSNSLDQLLDEHDPIPHSYVLEVS
SPGAERPLKKKKDFVNFAGKKVQIKTYVKLDGRKNFKGKLLGLEDEHVVLETFNSGEVKIPLDKIAKANLLLEL

Sequences:

>Translated_154_residues
MTQHDNISQIENIIEPAVRDLGYDLVDVELIMENQKWVLRVYIDHGKGIGLDDCELVSNSLDQLLDEHDPIPHSYVLEVS
SPGAERPLKKKKDFVNFAGKKVQIKTYVKLDGRKNFKGKLLGLEDEHVVLETFNSGEVKIPLDKIAKANLLLEL
>Mature_153_residues
TQHDNISQIENIIEPAVRDLGYDLVDVELIMENQKWVLRVYIDHGKGIGLDDCELVSNSLDQLLDEHDPIPHSYVLEVSS
PGAERPLKKKKDFVNFAGKKVQIKTYVKLDGRKNFKGKLLGLEDEHVVLETFNSGEVKIPLDKIAKANLLLEL

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=143, Percent_Identity=34.965034965035, Blast_Score=89, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_NATTJ (B2A393)

Other databases:

- EMBL:   CP001034
- RefSeq:   YP_001917611.1
- ProteinModelPortal:   B2A393
- SMR:   B2A393
- GeneID:   6314863
- GenomeReviews:   CP001034_GR
- KEGG:   nth:Nther_1440
- HOGENOM:   HBG668072
- OMA:   VMDVEDP
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 17446; Mature: 17315

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQHDNISQIENIIEPAVRDLGYDLVDVELIMENQKWVLRVYIDHGKGIGLDDCELVSNS
CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHH
LDQLLDEHDPIPHSYVLEVSSPGAERPLKKKKDFVNFAGKKVQIKTYVKLDGRKNFKGKL
HHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCCEEE
LGLEDEHVVLETFNSGEVKIPLDKIAKANLLLEL
ECCCCCEEEEEECCCCEEEECHHHHCCCEEEEEC
>Mature Secondary Structure 
TQHDNISQIENIIEPAVRDLGYDLVDVELIMENQKWVLRVYIDHGKGIGLDDCELVSNS
CCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHH
LDQLLDEHDPIPHSYVLEVSSPGAERPLKKKKDFVNFAGKKVQIKTYVKLDGRKNFKGKL
HHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCCEEE
LGLEDEHVVLETFNSGEVKIPLDKIAKANLLLEL
ECCCCCEEEEEECCCCEEEECHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA