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The map label for this gene is cheD [H]

Identifier: 188586047

GI number: 188586047

Start: 1491139

End: 1491621

Strand: Direct

Name: cheD [H]

Synonym: Nther_1421

Alternate gene names: 188586047

Gene position: 1491139-1491621 (Clockwise)

Preceding gene: 188586046

Following gene: 188586048

Centisome position: 47.11

GC content: 37.89

Gene sequence:

>483_bases
ATGACGATAGTTAAAGTCGGTATTGCAGACATGAAAGTGGCCTCTAAGGAAAGTATTATTCGAACTTCGGGATTGGGATC
ATGTGTTGGAATCACCCTTTATGATGGCTCTTTAAAAATTGGTGGAATGGTTCACATTATGCTACCTGAAAGTCCGACTA
ATAAGTCACAATTTAAAAGAACTAAATATGCAGATACCGGAATTGTAGATTTGCTAACAGAAATGGAAAATATGGGATGC
AAGCGGAGGAATTTGGTTTCTAAAATGGCCGGGGGAGCTCATATGTTTAAGTTTTCTGGTGGGAGTGAACTTTTGAAAAT
TGGAGAGAGAAACGCTAAAGCTGTAGAAGAAGTATTAACAGATTTAAAGGTAAAAATCCTTGCTAAAGATGTAGGAGGAG
ATTACGGCCGGACCATTGACCTTTTCTGTGAAACTGGAAAACTGCAAATCAAAACAATAAATCGTGGAGTTAAAGAGGTG
TAA

Upstream 100 bases:

>100_bases
ACCGAATTTGCCTATGAGGGAAATACCATTAGAGGACACTTTTTTCTGATTCCCGATAATGAATCCTTCCCAAAAATAAT
AAAATCTTTGGGGTTTGACT

Downstream 100 bases:

>100_bases
CAGTGAGTCTTAACTTGATAACCAGCTATCAAGATTCCGGTGATCGCCAGCAACTTGAGAAATTAATATCAGAATATAGT
TATTTGGTTAAAAAACAGGT

Product: CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MTIVKVGIADMKVASKESIIRTSGLGSCVGITLYDGSLKIGGMVHIMLPESPTNKSQFKRTKYADTGIVDLLTEMENMGC
KRRNLVSKMAGGAHMFKFSGGSELLKIGERNAKAVEEVLTDLKVKILAKDVGGDYGRTIDLFCETGKLQIKTINRGVKEV

Sequences:

>Translated_160_residues
MTIVKVGIADMKVASKESIIRTSGLGSCVGITLYDGSLKIGGMVHIMLPESPTNKSQFKRTKYADTGIVDLLTEMENMGC
KRRNLVSKMAGGAHMFKFSGGSELLKIGERNAKAVEEVLTDLKVKILAKDVGGDYGRTIDLFCETGKLQIKTINRGVKEV
>Mature_159_residues
TIVKVGIADMKVASKESIIRTSGLGSCVGITLYDGSLKIGGMVHIMLPESPTNKSQFKRTKYADTGIVDLLTEMENMGCK
RRNLVSKMAGGAHMFKFSGGSELLKIGERNAKAVEEVLTDLKVKILAKDVGGDYGRTIDLFCETGKLQIKTINRGVKEV

Specific function: Deamidates glutamine residues to glutamate on methyl- accepting chemotaxis receptors (MCPs). CheD-mediated MCP deamidation is required for productive communication of the conformational signals of the chemoreceptors to the CheA kinase [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 17343; Mature: 17212

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIVKVGIADMKVASKESIIRTSGLGSCVGITLYDGSLKIGGMVHIMLPESPTNKSQFKR
CEEEEECCCHHHHCCHHHHHCCCCCCCEEEEEEECCCEEECCEEEEEECCCCCCHHHHHH
TKYADTGIVDLLTEMENMGCKRRNLVSKMAGGAHMFKFSGGSELLKIGERNAKAVEEVLT
HHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCHHHHHHHHH
DLKVKILAKDVGGDYGRTIDLFCETGKLQIKTINRGVKEV
HHHEEEEEECCCCCCCCEEEEEEECCCEEEEEECCCCCCC
>Mature Secondary Structure 
TIVKVGIADMKVASKESIIRTSGLGSCVGITLYDGSLKIGGMVHIMLPESPTNKSQFKR
EEEEECCCHHHHCCHHHHHCCCCCCCEEEEEEECCCEEECCEEEEEECCCCCCHHHHHH
TKYADTGIVDLLTEMENMGCKRRNLVSKMAGGAHMFKFSGGSELLKIGERNAKAVEEVLT
HHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCHHHHHHHHH
DLKVKILAKDVGGDYGRTIDLFCETGKLQIKTINRGVKEV
HHHEEEEEECCCCCCCCEEEEEEECCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]