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The map label for this gene is fliM [H]

Identifier: 188586031

GI number: 188586031

Start: 1475401

End: 1476402

Strand: Direct

Name: fliM [H]

Synonym: Nther_1405

Alternate gene names: 188586031

Gene position: 1475401-1476402 (Clockwise)

Preceding gene: 188586030

Following gene: 188586032

Centisome position: 46.61

GC content: 37.03

Gene sequence:

>1002_bases
ATGTCAGAAGTTTTATCTCAGTCTGAAATAGACGACTTATTATCTGCTATTTCAACTGGAGATCTTAACGTGGAAGATGC
CAAGCAACAGGATACTCAACAAAAAGTTAAACCTTATGATTTTAGGCGACCAGCTAAATTTTCAAAAGATCAGATCAGAA
CACTACAAATGATCAATGAGAATTTTGCCAGATTATTATCAACTTATCTTTCAGCTTATCTGCGTTCTTATGTAGAAATC
GAACTAGCTTCTGTGGATCAGGTGACTTACGACGAATTTATGAGATCACTGACTAATCCTACGATTATGGGGATTTTTTC
TGCTCCTCCCATGGAAGGTAAGTCATTAATGGAGATGAATCCAAATATTGCTTTTGCTGTGATAGACCGCTTAATGGGTG
GTCCTGGGGAGACTTTTGAAAGCACAGGTGAATTGACTGAAATTGAAGAAGCCGTGGCAAGAAAAATATTTAATCGCATG
CTCGATAGTATGTTGGAAGCGTGGAAGAATGTGGGTGAATTGGAGCCTGAATTTGAGCGGATTGAAAATAATCCCCAGTT
CACACAAATAATTTCTCCTAATGAGATAGTAGCAGTGGTAGCTTTTTCTGTAAAAGTAGGAGAAGCTGAAGGGTTGTTCA
ATGTTTGTTTGCCATATATTTTTCTTGAACCTGTAATAGATAGACTATCAGCTAGGTTTTGGTTCGCTACAGGACATCAA
AAAAAGATAACTGAAGAAGAATCTCAAGCTCTTAAAAATAGGCTTCATAAAACTCAGGTTCCAGTAAAAGCCGAGTTGGC
GAGAACGAGAATTTCAGTCAAGGAATTTTTAAACTTGCAAGAAGGGGATGTAATTTCATTGAATAAACCATTCGAAAGCG
AAATTGATCTGATAGTAGGAAAAAAGACGAAATTCAAGGGCAAACCTGGATCAATTAAAAATAAACTAGCTGTACAAATC
ACTCAAATAGTTAGGGAAGGAGATGATTCCCTTGGAGAATAA

Upstream 100 bases:

>100_bases
TAGATGAAAGAATCGAGGAAGGAGAAGTAGTTAACGTTTACTTTAACCGGCCATTAATAACTTAACTAAATGCCGGTGTA
TGAATGGGGGGATGTGAGAT

Downstream 100 bases:

>100_bases
TAAAGATATCTTGTCCCAAGAAGAAATTGATGCTCTGTTAAAAGGATCAGGCGACGATGATAGTGGCGATGATGGAGATA
ACCATGGTGGTAGTGGCGGC

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MSEVLSQSEIDDLLSAISTGDLNVEDAKQQDTQQKVKPYDFRRPAKFSKDQIRTLQMINENFARLLSTYLSAYLRSYVEI
ELASVDQVTYDEFMRSLTNPTIMGIFSAPPMEGKSLMEMNPNIAFAVIDRLMGGPGETFESTGELTEIEEAVARKIFNRM
LDSMLEAWKNVGELEPEFERIENNPQFTQIISPNEIVAVVAFSVKVGEAEGLFNVCLPYIFLEPVIDRLSARFWFATGHQ
KKITEEESQALKNRLHKTQVPVKAELARTRISVKEFLNLQEGDVISLNKPFESEIDLIVGKKTKFKGKPGSIKNKLAVQI
TQIVREGDDSLGE

Sequences:

>Translated_333_residues
MSEVLSQSEIDDLLSAISTGDLNVEDAKQQDTQQKVKPYDFRRPAKFSKDQIRTLQMINENFARLLSTYLSAYLRSYVEI
ELASVDQVTYDEFMRSLTNPTIMGIFSAPPMEGKSLMEMNPNIAFAVIDRLMGGPGETFESTGELTEIEEAVARKIFNRM
LDSMLEAWKNVGELEPEFERIENNPQFTQIISPNEIVAVVAFSVKVGEAEGLFNVCLPYIFLEPVIDRLSARFWFATGHQ
KKITEEESQALKNRLHKTQVPVKAELARTRISVKEFLNLQEGDVISLNKPFESEIDLIVGKKTKFKGKPGSIKNKLAVQI
TQIVREGDDSLGE
>Mature_332_residues
SEVLSQSEIDDLLSAISTGDLNVEDAKQQDTQQKVKPYDFRRPAKFSKDQIRTLQMINENFARLLSTYLSAYLRSYVEIE
LASVDQVTYDEFMRSLTNPTIMGIFSAPPMEGKSLMEMNPNIAFAVIDRLMGGPGETFESTGELTEIEEAVARKIFNRML
DSMLEAWKNVGELEPEFERIENNPQFTQIISPNEIVAVVAFSVKVGEAEGLFNVCLPYIFLEPVIDRLSARFWFATGHQK
KITEEESQALKNRLHKTQVPVKAELARTRISVKEFLNLQEGDVISLNKPFESEIDLIVGKKTKFKGKPGSIKNKLAVQIT
QIVREGDDSLGE

Specific function: One of the proteins that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of f

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=339, Percent_Identity=28.9085545722714, Blast_Score=136, Evalue=1e-33,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 37623; Mature: 37492

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVLSQSEIDDLLSAISTGDLNVEDAKQQDTQQKVKPYDFRRPAKFSKDQIRTLQMINE
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
NFARLLSTYLSAYLRSYVEIELASVDQVTYDEFMRSLTNPTIMGIFSAPPMEGKSLMEMN
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCC
PNIAFAVIDRLMGGPGETFESTGELTEIEEAVARKIFNRMLDSMLEAWKNVGELEPEFER
CCHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
IENNPQFTQIISPNEIVAVVAFSVKVGEAEGLFNVCLPYIFLEPVIDRLSARFWFATGHQ
HCCCCCEEEEECCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCC
KKITEEESQALKNRLHKTQVPVKAELARTRISVKEFLNLQEGDVISLNKPFESEIDLIVG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEC
KKTKFKGKPGSIKNKLAVQITQIVREGDDSLGE
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SEVLSQSEIDDLLSAISTGDLNVEDAKQQDTQQKVKPYDFRRPAKFSKDQIRTLQMINE
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
NFARLLSTYLSAYLRSYVEIELASVDQVTYDEFMRSLTNPTIMGIFSAPPMEGKSLMEMN
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCC
PNIAFAVIDRLMGGPGETFESTGELTEIEEAVARKIFNRMLDSMLEAWKNVGELEPEFER
CCHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
IENNPQFTQIISPNEIVAVVAFSVKVGEAEGLFNVCLPYIFLEPVIDRLSARFWFATGHQ
HCCCCCEEEEECCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCC
KKITEEESQALKNRLHKTQVPVKAELARTRISVKEFLNLQEGDVISLNKPFESEIDLIVG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEC
KKTKFKGKPGSIKNKLAVQITQIVREGDDSLGE
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1898932; 9384377; 1828465; 1447979 [H]