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The map label for this gene is fliF [H]

Identifier: 188586017

GI number: 188586017

Start: 1462715

End: 1464274

Strand: Direct

Name: fliF [H]

Synonym: Nther_1391

Alternate gene names: 188586017

Gene position: 1462715-1464274 (Clockwise)

Preceding gene: 188586016

Following gene: 188586018

Centisome position: 46.21

GC content: 40.64

Gene sequence:

>1560_bases
ATGAATGAAATGTTAGCTAATGCAAAAAATCAGTCACAGCAATTTTGGGGCAATTTATCAAAAGGTCAAAAGATAACTTT
TGCCACCGCTCTGGGACTATTTATTATTGGTACCCTGGTACTGTCTGTCTCTATGCTACAAACTGATTATACAGAAGTTG
CACGGGATTTAGATCCCAGAGATGCCAGTGAAATAGCTGAAATGATAGAAGATATGGGTGTTTCTTATCAAATAGAGGAT
GGAGGCTCTCGTATCCTGGTGCCTGAAGACGATCACGATCAGGTTAGATTAGAGTTAGCTGGCGCCGGATTACCGCGAGG
TGGTGTCCTGGGATATGAAGAGTTAGATACACAACAGTTGGGACTTACTGAATCTGAGCGAGAGATGCGTCAAAAGATTG
CTCTGGAAGGAGAACTTGTACGTACCATTCGTCGTTATCCTGAAGTTGAAGATGCAAGAGTACATTTAGTTCTTCCGGAA
AGATCTATTTTCGAAGAAACTCGTGAAGATTCGCAAGCTGCTGTTTTTTTGGATTTAGAACCTCATAGGGAACTGACTGA
ACAGCAGATAAGCAGTATAGTCAATTTAGTTGCCCATTCTGTGGAAGGTCTGACACCCAAAAATGTCACATTAACATCAG
GAGACAGGATGCTAAGTGACAAAACCCAATCCGATGACAAAAACAGCCCTAGTGCTGGATCAGAAGTTGAAAAGAGATTA
TCCATTCAAGAAGAATTTCAAAATACACTCCAAAGCAGTGTAGAAAGTATGTTGGAAAATATAGTGGGCAGAGGTAATGT
GACAGCCCGAGTAAATGCGGAATTGGATTTTGACGAATTTGAATCCTTTTCAGAACTCTTTGAGCCCGTTGAGGGTGATG
AAGGAATATTGGTGAGCATGCATAGAGAAGAGGAGTTTTACTCCGGTGAAGATGTAAGTCAAGGAGGTGTTCCTGGAGAT
CCTGCCGAGGGAACTCCGGAATATCAAGAAGTAACCGGAGAAGGTGGTAGCTTTGATTACGAAAGAATAGATGAAACTAG
AAATTATGAAGTGAATAAGATTGAAGAAAGATCAAGGCTAGCTCCTGGCGCACTAAATAAATTGAGTGTAGCTGTAGCTG
TAAATCAAGAACTCGATGAAGATGAAATGGATAGCATAGAAGCGCTAGTAGAAGACGCAGTAGGAATAAATTTAGAAAAC
GAGAACCATCAGATAACAGTTGAACAAATGGACTTTGATACTTCTTTACAGGATATGTTAGCTGCACAACATGAGAAAAA
ACAACAAATGGCAGCGCAACAGAGATGGATAACCCTTGGCATTGGAGCTGCAGTCCTAGTTGTTCTGGCTCTCATTGGTA
GAAAGATTTATAAAACCATAAGGGATAGAAAAGAAATAGAAGATCGCCTTGAGAGAGAACAAATGGTACAAGATCAGGCA
GCAGCTTCAGAAGATATTGAACCTGAAGTACCTAAAGTTCAAAAACAAATCTCCGATTTCGCTGAGAAAAAACCAGAAGA
GTTTGCCAAAGTATTGAAGGCTTGGCTAGCTGAAGAATAA

Upstream 100 bases:

>100_bases
CGAGTTAGCTCTCAACTTAACTTTAGAAGTTAGGAATCAACTCATAGAAACCCATGACGAATTAATGCGGATGCAAATAT
AAAGGCGTGGTGATTAATCC

Downstream 100 bases:

>100_bases
AGGGGTGAGACCATGAGTCCCGAAGAACTTTCTCCTAAACAAAAAGCTGCCGTGTTAATGATTTCTCTCGGCAGCGATAC
GTCAGCAGAGGTTATGAAGC

Product: flagellar M-ring protein FliF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MNEMLANAKNQSQQFWGNLSKGQKITFATALGLFIIGTLVLSVSMLQTDYTEVARDLDPRDASEIAEMIEDMGVSYQIED
GGSRILVPEDDHDQVRLELAGAGLPRGGVLGYEELDTQQLGLTESEREMRQKIALEGELVRTIRRYPEVEDARVHLVLPE
RSIFEETREDSQAAVFLDLEPHRELTEQQISSIVNLVAHSVEGLTPKNVTLTSGDRMLSDKTQSDDKNSPSAGSEVEKRL
SIQEEFQNTLQSSVESMLENIVGRGNVTARVNAELDFDEFESFSELFEPVEGDEGILVSMHREEEFYSGEDVSQGGVPGD
PAEGTPEYQEVTGEGGSFDYERIDETRNYEVNKIEERSRLAPGALNKLSVAVAVNQELDEDEMDSIEALVEDAVGINLEN
ENHQITVEQMDFDTSLQDMLAAQHEKKQQMAAQQRWITLGIGAAVLVVLALIGRKIYKTIRDRKEIEDRLEREQMVQDQA
AASEDIEPEVPKVQKQISDFAEKKPEEFAKVLKAWLAEE

Sequences:

>Translated_519_residues
MNEMLANAKNQSQQFWGNLSKGQKITFATALGLFIIGTLVLSVSMLQTDYTEVARDLDPRDASEIAEMIEDMGVSYQIED
GGSRILVPEDDHDQVRLELAGAGLPRGGVLGYEELDTQQLGLTESEREMRQKIALEGELVRTIRRYPEVEDARVHLVLPE
RSIFEETREDSQAAVFLDLEPHRELTEQQISSIVNLVAHSVEGLTPKNVTLTSGDRMLSDKTQSDDKNSPSAGSEVEKRL
SIQEEFQNTLQSSVESMLENIVGRGNVTARVNAELDFDEFESFSELFEPVEGDEGILVSMHREEEFYSGEDVSQGGVPGD
PAEGTPEYQEVTGEGGSFDYERIDETRNYEVNKIEERSRLAPGALNKLSVAVAVNQELDEDEMDSIEALVEDAVGINLEN
ENHQITVEQMDFDTSLQDMLAAQHEKKQQMAAQQRWITLGIGAAVLVVLALIGRKIYKTIRDRKEIEDRLEREQMVQDQA
AASEDIEPEVPKVQKQISDFAEKKPEEFAKVLKAWLAEE
>Mature_519_residues
MNEMLANAKNQSQQFWGNLSKGQKITFATALGLFIIGTLVLSVSMLQTDYTEVARDLDPRDASEIAEMIEDMGVSYQIED
GGSRILVPEDDHDQVRLELAGAGLPRGGVLGYEELDTQQLGLTESEREMRQKIALEGELVRTIRRYPEVEDARVHLVLPE
RSIFEETREDSQAAVFLDLEPHRELTEQQISSIVNLVAHSVEGLTPKNVTLTSGDRMLSDKTQSDDKNSPSAGSEVEKRL
SIQEEFQNTLQSSVESMLENIVGRGNVTARVNAELDFDEFESFSELFEPVEGDEGILVSMHREEEFYSGEDVSQGGVPGD
PAEGTPEYQEVTGEGGSFDYERIDETRNYEVNKIEERSRLAPGALNKLSVAVAVNQELDEDEMDSIEALVEDAVGINLEN
ENHQITVEQMDFDTSLQDMLAAQHEKKQQMAAQQRWITLGIGAAVLVVLALIGRKIYKTIRDRKEIEDRLEREQMVQDQA
AASEDIEPEVPKVQKQISDFAEKKPEEFAKVLKAWLAEE

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=511, Percent_Identity=31.1154598825832, Blast_Score=187, Evalue=1e-48,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 58126; Mature: 58126

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEMLANAKNQSQQFWGNLSKGQKITFATALGLFIIGTLVLSVSMLQTDYTEVARDLDPR
CCCHHHCCHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DASEIAEMIEDMGVSYQIEDGGSRILVPEDDHDQVRLELAGAGLPRGGVLGYEELDTQQL
CHHHHHHHHHHCCCEEEECCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHCHHHC
GLTESEREMRQKIALEGELVRTIRRYPEVEDARVHLVLPERSIFEETREDSQAAVFLDLE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHCCCCEEEEEECC
PHRELTEQQISSIVNLVAHSVEGLTPKNVTLTSGDRMLSDKTQSDDKNSPSAGSEVEKRL
CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHCCCCCCCCCCCCCCCHHHHHHH
SIQEEFQNTLQSSVESMLENIVGRGNVTARVNAELDFDEFESFSELFEPVEGDEGILVSM
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEE
HREEEFYSGEDVSQGGVPGDPAEGTPEYQEVTGEGGSFDYERIDETRNYEVNKIEERSRL
ECCHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHCC
APGALNKLSVAVAVNQELDEDEMDSIEALVEDAVGINLENENHQITVEQMDFDTSLQDML
CCCCHHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHH
AAQHEKKQQMAAQQRWITLGIGAAVLVVLALIGRKIYKTIRDRKEIEDRLEREQMVQDQA
HHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASEDIEPEVPKVQKQISDFAEKKPEEFAKVLKAWLAEE
HCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNEMLANAKNQSQQFWGNLSKGQKITFATALGLFIIGTLVLSVSMLQTDYTEVARDLDPR
CCCHHHCCHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DASEIAEMIEDMGVSYQIEDGGSRILVPEDDHDQVRLELAGAGLPRGGVLGYEELDTQQL
CHHHHHHHHHHCCCEEEECCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHCHHHC
GLTESEREMRQKIALEGELVRTIRRYPEVEDARVHLVLPERSIFEETREDSQAAVFLDLE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHCCCCEEEEEECC
PHRELTEQQISSIVNLVAHSVEGLTPKNVTLTSGDRMLSDKTQSDDKNSPSAGSEVEKRL
CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHCCCCCCCCCCCCCCCHHHHHHH
SIQEEFQNTLQSSVESMLENIVGRGNVTARVNAELDFDEFESFSELFEPVEGDEGILVSM
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEE
HREEEFYSGEDVSQGGVPGDPAEGTPEYQEVTGEGGSFDYERIDETRNYEVNKIEERSRL
ECCHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHCC
APGALNKLSVAVAVNQELDEDEMDSIEALVEDAVGINLENENHQITVEQMDFDTSLQDML
CCCCHHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHH
AAQHEKKQQMAAQQRWITLGIGAAVLVVLALIGRKIYKTIRDRKEIEDRLEREQMVQDQA
HHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASEDIEPEVPKVQKQISDFAEKKPEEFAKVLKAWLAEE
HCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2544561; 11677609; 1551848 [H]