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The map label for this gene is flgC [H]

Identifier: 188586015

GI number: 188586015

Start: 1461951

End: 1462391

Strand: Direct

Name: flgC [H]

Synonym: Nther_1389

Alternate gene names: 188586015

Gene position: 1461951-1462391 (Clockwise)

Preceding gene: 188586014

Following gene: 188586016

Centisome position: 46.18

GC content: 36.96

Gene sequence:

>441_bases
ATGTTTGACACCTTTGATATTAGTGGATCTGGTTTAACAGCAGAAAGGTTACGTATGGATGTTATTTCTAATAATATAGC
CAATGCCAATACAACCAGAACTGAAGATGGCGAACCTTATAGACGACAGATGCCTGTATTTGAAACTAGAGGAAAAAGTT
TTAGTGACCACTTACATAGTTTTTTGCAAAAAGATGGAGATTTTGATTCCCAAGGTGTCAGGGTCAGTAGTATTGAAGAA
GATGATTCACCTTTTAAAGAAATTTATGACCCGGAACATCCTGAAGCTGATCCGGAAACCGGATATGTTCAAAAACCCAA
TGTTGAAATAGTTAAAGAGATGACGGATATGATTACAGCATCACGGGCATATGAAGCCAATGCTACAGCAATAGATAATG
CAAAAAGTATGGCCTCTAATACATTAGATATCGGTCGATAA

Upstream 100 bases:

>100_bases
CGGTTGACCCAAAACTCTCTTCATCATCAGGCCCTTACAAGACAGTTAAGCAGTGAATTTAACAAATTGCGTTCTGCTAT
ACAAGGAGGGAGGTAAATAA

Downstream 100 bases:

>100_bases
TGGGGGGGATTAACATGAGAATAGAAGGTATTGGTGAAAACACTGTAAATCCTATTAATCAAGGAAATAAACAAAAGGCA
GAGGACTTAAATTTTAGAGA

Product: flagellar basal-body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MFDTFDISGSGLTAERLRMDVISNNIANANTTRTEDGEPYRRQMPVFETRGKSFSDHLHSFLQKDGDFDSQGVRVSSIEE
DDSPFKEIYDPEHPEADPETGYVQKPNVEIVKEMTDMITASRAYEANATAIDNAKSMASNTLDIGR

Sequences:

>Translated_146_residues
MFDTFDISGSGLTAERLRMDVISNNIANANTTRTEDGEPYRRQMPVFETRGKSFSDHLHSFLQKDGDFDSQGVRVSSIEE
DDSPFKEIYDPEHPEADPETGYVQKPNVEIVKEMTDMITASRAYEANATAIDNAKSMASNTLDIGR
>Mature_146_residues
MFDTFDISGSGLTAERLRMDVISNNIANANTTRTEDGEPYRRQMPVFETRGKSFSDHLHSFLQKDGDFDSQGVRVSSIEE
DDSPFKEIYDPEHPEADPETGYVQKPNVEIVKEMTDMITASRAYEANATAIDNAKSMASNTLDIGR

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=146, Percent_Identity=36.3013698630137, Blast_Score=107, Evalue=3e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 16345; Mature: 16345

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDTFDISGSGLTAERLRMDVISNNIANANTTRTEDGEPYRRQMPVFETRGKSFSDHLHS
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCHHHHHHH
FLQKDGDFDSQGVRVSSIEEDDSPFKEIYDPEHPEADPETGYVQKPNVEIVKEMTDMITA
HHHCCCCCCCCCEEEECCCCCCCCHHHHCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHH
SRAYEANATAIDNAKSMASNTLDIGR
HHCCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFDTFDISGSGLTAERLRMDVISNNIANANTTRTEDGEPYRRQMPVFETRGKSFSDHLHS
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCHHHHHHH
FLQKDGDFDSQGVRVSSIEEDDSPFKEIYDPEHPEADPETGYVQKPNVEIVKEMTDMITA
HHHCCCCCCCCCEEEECCCCCCCCHHHHCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHH
SRAYEANATAIDNAKSMASNTLDIGR
HHCCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]