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The map label for this gene is ygaE [H]

Identifier: 188586004

GI number: 188586004

Start: 1447665

End: 1448774

Strand: Reverse

Name: ygaE [H]

Synonym: Nther_1378

Alternate gene names: 188586004

Gene position: 1448774-1447665 (Counterclockwise)

Preceding gene: 188586120

Following gene: 188585979

Centisome position: 45.77

GC content: 34.86

Gene sequence:

>1110_bases
GTGATAATAGGACCAAGAGTTTGGAAAACAGGATTGGCCGTTACAATCACAATATGGTTGGCCAGTTTATTACAATTAGA
ATATGCTTATCTAGCAGCTATAGCAGCTATTATTTCACTACAGCCCACAATTACTGATTCTTTTATCAAGGGCTGGGAAA
GAATTCAGGCTACTGCTATCGGAGCAATAATAGCTTTATTAATGTTATTCACTTTGGGAAATAACCCTTTACTTGTAGGA
CTTGCTATTATCATTACTATTTTGGTCTGTCTTAAGTTTGGCTGGACCGAATCTATCAACTTGGCTTGCGTAACAGTGGC
AATTATAATGACCGGAGGACGAGACGACACAGTTTCTTATGCTGTCCATCGAGCTACCATTTTACCCTTCTTAGGAATTA
TCGTAGCAGTAATAATTAATCTTTTATTTTCTCCACCACAGCATATTGAAACTGTAAAAAAGAGCTTGCGCGACTTAAAT
GAAGGAATTGAATTATTGATGATGAGAGTTATCAACAGTTTTCTGACTTGTGAAAACTACAGTCAGGAACATATCGATCA
GTTGGTTGACAGAATTTATCACCTCCATGATGAAGCAAAGCAAAAATTAGCCATGTATAAAAATGAACGAGGTTACAAGC
GTTACTTTGGGAGCAAGCACAAAAGCTTTAATGAGATCGATAAAATGGAAAAGGCATTAGAACTGCTATGGCTTATAGCC
CAACGGGTAATTGATATTCAATATGTTGCTGAACAAAGATGTAATCGTTTATCTGGTATCAGAAACCCCAGTACACAATA
CAATGATTTACTTAATTCAGTACAAGAATTCTTGTTTTTAACCACAAGTCTAGAAAAAAATTTACTGGAAAATTTCTTAG
AATCCGATGATAATAGAGTAGAAATAATTTCAAATCAGATAGAAGAAATCACCACTTTAAGAGAAGAACTGCGTGAAAAA
ATTAATAACTGGCAAGAAAGCCACTTAGGACCTGCTCATATTAGGTCTCTAATCGAAATTGCTACACTAGTTTATGACTT
AGACCAAATTTGTAATTTATTATTCCAATTTCAAAGTTTAACCCAGGAAAAAAATGAAGACACCCAATAA

Upstream 100 bases:

>100_bases
TTAATTTATTTAAAATAACCTTGAGTTTTATCCCTTTCCATGTTAGTATATTTAAGAAATATCGGGAGTGTTATTATATT
TGTTAATGGGGAGAAGACCA

Downstream 100 bases:

>100_bases
TGGGTGTCTTTTTTACTGGTATTTACGATCTAAGCCGCGATAACTACTAGCTTCAGCCAAATCTGAGGCGGTAATTTGGT
TATCACCACGCAAATCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MIIGPRVWKTGLAVTITIWLASLLQLEYAYLAAIAAIISLQPTITDSFIKGWERIQATAIGAIIALLMLFTLGNNPLLVG
LAIIITILVCLKFGWTESINLACVTVAIIMTGGRDDTVSYAVHRATILPFLGIIVAVIINLLFSPPQHIETVKKSLRDLN
EGIELLMMRVINSFLTCENYSQEHIDQLVDRIYHLHDEAKQKLAMYKNERGYKRYFGSKHKSFNEIDKMEKALELLWLIA
QRVIDIQYVAEQRCNRLSGIRNPSTQYNDLLNSVQEFLFLTTSLEKNLLENFLESDDNRVEIISNQIEEITTLREELREK
INNWQESHLGPAHIRSLIEIATLVYDLDQICNLLFQFQSLTQEKNEDTQ

Sequences:

>Translated_369_residues
MIIGPRVWKTGLAVTITIWLASLLQLEYAYLAAIAAIISLQPTITDSFIKGWERIQATAIGAIIALLMLFTLGNNPLLVG
LAIIITILVCLKFGWTESINLACVTVAIIMTGGRDDTVSYAVHRATILPFLGIIVAVIINLLFSPPQHIETVKKSLRDLN
EGIELLMMRVINSFLTCENYSQEHIDQLVDRIYHLHDEAKQKLAMYKNERGYKRYFGSKHKSFNEIDKMEKALELLWLIA
QRVIDIQYVAEQRCNRLSGIRNPSTQYNDLLNSVQEFLFLTTSLEKNLLENFLESDDNRVEIISNQIEEITTLREELREK
INNWQESHLGPAHIRSLIEIATLVYDLDQICNLLFQFQSLTQEKNEDTQ
>Mature_369_residues
MIIGPRVWKTGLAVTITIWLASLLQLEYAYLAAIAAIISLQPTITDSFIKGWERIQATAIGAIIALLMLFTLGNNPLLVG
LAIIITILVCLKFGWTESINLACVTVAIIMTGGRDDTVSYAVHRATILPFLGIIVAVIINLLFSPPQHIETVKKSLRDLN
EGIELLMMRVINSFLTCENYSQEHIDQLVDRIYHLHDEAKQKLAMYKNERGYKRYFGSKHKSFNEIDKMEKALELLWLIA
QRVIDIQYVAEQRCNRLSGIRNPSTQYNDLLNSVQEFLFLTTSLEKNLLENFLESDDNRVEIISNQIEEITTLREELREK
INNWQESHLGPAHIRSLIEIATLVYDLDQICNLLFQFQSLTQEKNEDTQ

Specific function: Unknown

COG id: COG4129

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0421 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010343 [H]

Pfam domain/function: PF06081 DUF939 [H]

EC number: NA

Molecular weight: Translated: 42194; Mature: 42194

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIGPRVWKTGLAVTITIWLASLLQLEYAYLAAIAAIISLQPTITDSFIKGWERIQATAI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
GAIIALLMLFTLGNNPLLVGLAIIITILVCLKFGWTESINLACVTVAIIMTGGRDDTVSY
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHH
AVHRATILPFLGIIVAVIINLLFSPPQHIETVKKSLRDLNEGIELLMMRVINSFLTCENY
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SQEHIDQLVDRIYHLHDEAKQKLAMYKNERGYKRYFGSKHKSFNEIDKMEKALELLWLIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
QRVIDIQYVAEQRCNRLSGIRNPSTQYNDLLNSVQEFLFLTTSLEKNLLENFLESDDNRV
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
EIISNQIEEITTLREELREKINNWQESHLGPAHIRSLIEIATLVYDLDQICNLLFQFQSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQEKNEDTQ
HHHCCCCCC
>Mature Secondary Structure
MIIGPRVWKTGLAVTITIWLASLLQLEYAYLAAIAAIISLQPTITDSFIKGWERIQATAI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
GAIIALLMLFTLGNNPLLVGLAIIITILVCLKFGWTESINLACVTVAIIMTGGRDDTVSY
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHH
AVHRATILPFLGIIVAVIINLLFSPPQHIETVKKSLRDLNEGIELLMMRVINSFLTCENY
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SQEHIDQLVDRIYHLHDEAKQKLAMYKNERGYKRYFGSKHKSFNEIDKMEKALELLWLIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
QRVIDIQYVAEQRCNRLSGIRNPSTQYNDLLNSVQEFLFLTTSLEKNLLENFLESDDNRV
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
EIISNQIEEITTLREELREKINNWQESHLGPAHIRSLIEIATLVYDLDQICNLLFQFQSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQEKNEDTQ
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]