Click here to switch to the map view.

The map label for this gene is ylbL [H]

Identifier: 188585978

GI number: 188585978

Start: 1424823

End: 1425821

Strand: Direct

Name: ylbL [H]

Synonym: Nther_1352

Alternate gene names: 188585978

Gene position: 1424823-1425821 (Clockwise)

Preceding gene: 188585977

Following gene: 188585980

Centisome position: 45.01

GC content: 36.94

Gene sequence:

>999_bases
ATGACTAACTCTAAATCACTCATTGCAAGAATTTTACAAACCTTTGCTGTAGTTGCCGTCCTAATATTATTACTAAGTCA
GGTGACGCCAGATTATTATCTGGTACAACCAGGTACACCTTTAGAGTTGAGTGAGGTTATTGAAATAGACAATGATAGCC
AAAAATTTGGCAATTTGTTTTTGACAACAGTGAATCAATCTCGCACCAGTGGAGTATCATTTTTGTATGGATTACTTAAT
CCCAATGCTGAATTACATGAAATAGAAGAAGTGATACCTCCGGAAATGGATGTGGAAGAGTATCGAGAGATGATGCAGCA
ACGCATGACGGACAGTCAAAACATAGCAAAAACAGTTGCTCTAGAAAATTTGGGTCATGAAATAGAATTTACTGGAGAAG
GTATAAAGGTATTAGAGCTAGCAGAGGATAGTCCTGCAGAAAACATTTTAAAAAAAGATGATATTATCACTAAAGTCAAC
GGAGAACCCATATATTTAGCCGAAGAATTAGTCGGTTATATAGAAAATCATCCTATTGGTGAAACTGTAGAATTGACAAT
TGAACGAAATAACCAAGAGGAGCTAAAAACTGTAGAAACGAAAGCTCATCCTGATAATCCGGATAATTCATACTTGGGCG
TTTTTATAAAAACTGTCAAATGGGAACCTATACTACCAGTTGATATAAATTTTGAAACAGGAGGTATTGGTGGTCCTTCA
GCAGGTTTGATGTTTGTTTTAGAAATCATGAATCAGTTAACTGAAGAAGACTTAAGTCAAGGGCGAGTAATTGCAGGTAC
AGGGGCGATAGATTTAGATGGTTCCGTTAATGCGGTAGGAGGAGTAAGACATAAAGTTCGAGCTGCAGAAGCCCAAGGCG
CTACTTACTTCCTGGTTCCCGAAAACAATTATGAAGAAGCTCAACAAGGGGCCGAAGATATCAAAGTTGTCAAAGTAACA
AATATTGAAGAAGTTCAAGATTTTTTGGAATCACTTTAA

Upstream 100 bases:

>100_bases
CAATCAATTCCAAAAGGCAGAAGAAGCTATTGAAGCAGGCAAAGAAGCATGTCAGGAAGTTTTACCAGCTTTAAAACAAG
TAGTCGAGGAGTGTTAAAAA

Downstream 100 bases:

>100_bases
TGTAAATTTAGTCAGGATGTACAATAGGAGGCCTTATATATTCTTCTCGACCGTCTTTTTGTTTTAATAAATTATAAAAG
GCTGATGCCTTCACTTCCCA

Product: PDZ/DHR/GLGF domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MTNSKSLIARILQTFAVVAVLILLLSQVTPDYYLVQPGTPLELSEVIEIDNDSQKFGNLFLTTVNQSRTSGVSFLYGLLN
PNAELHEIEEVIPPEMDVEEYREMMQQRMTDSQNIAKTVALENLGHEIEFTGEGIKVLELAEDSPAENILKKDDIITKVN
GEPIYLAEELVGYIENHPIGETVELTIERNNQEELKTVETKAHPDNPDNSYLGVFIKTVKWEPILPVDINFETGGIGGPS
AGLMFVLEIMNQLTEEDLSQGRVIAGTGAIDLDGSVNAVGGVRHKVRAAEAQGATYFLVPENNYEEAQQGAEDIKVVKVT
NIEEVQDFLESL

Sequences:

>Translated_332_residues
MTNSKSLIARILQTFAVVAVLILLLSQVTPDYYLVQPGTPLELSEVIEIDNDSQKFGNLFLTTVNQSRTSGVSFLYGLLN
PNAELHEIEEVIPPEMDVEEYREMMQQRMTDSQNIAKTVALENLGHEIEFTGEGIKVLELAEDSPAENILKKDDIITKVN
GEPIYLAEELVGYIENHPIGETVELTIERNNQEELKTVETKAHPDNPDNSYLGVFIKTVKWEPILPVDINFETGGIGGPS
AGLMFVLEIMNQLTEEDLSQGRVIAGTGAIDLDGSVNAVGGVRHKVRAAEAQGATYFLVPENNYEEAQQGAEDIKVVKVT
NIEEVQDFLESL
>Mature_331_residues
TNSKSLIARILQTFAVVAVLILLLSQVTPDYYLVQPGTPLELSEVIEIDNDSQKFGNLFLTTVNQSRTSGVSFLYGLLNP
NAELHEIEEVIPPEMDVEEYREMMQQRMTDSQNIAKTVALENLGHEIEFTGEGIKVLELAEDSPAENILKKDDIITKVNG
EPIYLAEELVGYIENHPIGETVELTIERNNQEELKTVETKAHPDNPDNSYLGVFIKTVKWEPILPVDINFETGGIGGPSA
GLMFVLEIMNQLTEEDLSQGRVIAGTGAIDLDGSVNAVGGVRHKVRAAEAQGATYFLVPENNYEEAQQGAEDIKVVKVTN
IEEVQDFLESL

Specific function: Unknown

COG id: COG3480

COG function: function code T; Predicted secreted protein containing a PDZ domain

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR008269
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C; PF00595 PDZ [H]

EC number: NA

Molecular weight: Translated: 36687; Mature: 36556

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNSKSLIARILQTFAVVAVLILLLSQVTPDYYLVQPGTPLELSEVIEIDNDSQKFGNLF
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHEECCCCCHHHCCEE
LTTVNQSRTSGVSFLYGLLNPNAELHEIEEVIPPEMDVEEYREMMQQRMTDSQNIAKTVA
EEEECCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
LENLGHEIEFTGEGIKVLELAEDSPAENILKKDDIITKVNGEPIYLAEELVGYIENHPIG
HHHCCCEEEECCCCEEEEEECCCCCHHHHHHHCCEEEEECCCEEEEHHHHHHHHHCCCCC
ETVELTIERNNQEELKTVETKAHPDNPDNSYLGVFIKTVKWEPILPVDINFETGGIGGPS
CEEEEEEECCCHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCH
AGLMFVLEIMNQLTEEDLSQGRVIAGTGAIDLDGSVNAVGGVRHKVRAAEAQGATYFLVP
HHHHHHHHHHHHHHHHHHHCCEEEEECCCEECCCCCCHHHHHHHHHHHHHCCCCEEEEEE
ENNYEEAQQGAEDIKVVKVTNIEEVQDFLESL
CCCHHHHHCCHHHEEEEEECCHHHHHHHHHHC
>Mature Secondary Structure 
TNSKSLIARILQTFAVVAVLILLLSQVTPDYYLVQPGTPLELSEVIEIDNDSQKFGNLF
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHEECCCCCHHHCCEE
LTTVNQSRTSGVSFLYGLLNPNAELHEIEEVIPPEMDVEEYREMMQQRMTDSQNIAKTVA
EEEECCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
LENLGHEIEFTGEGIKVLELAEDSPAENILKKDDIITKVNGEPIYLAEELVGYIENHPIG
HHHCCCEEEECCCCEEEEEECCCCCHHHHHHHCCEEEEECCCEEEEHHHHHHHHHCCCCC
ETVELTIERNNQEELKTVETKAHPDNPDNSYLGVFIKTVKWEPILPVDINFETGGIGGPS
CEEEEEEECCCHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCH
AGLMFVLEIMNQLTEEDLSQGRVIAGTGAIDLDGSVNAVGGVRHKVRAAEAQGATYFLVP
HHHHHHHHHHHHHHHHHHHCCEEEEECCCEECCCCCCHHHHHHHHHHHHHCCCCEEEEEE
ENNYEEAQQGAEDIKVVKVTNIEEVQDFLESL
CCCHHHHHCCHHHEEEEEECCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]