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The map label for this gene is ylbK [H]

Identifier: 188585977

GI number: 188585977

Start: 1424049

End: 1424819

Strand: Direct

Name: ylbK [H]

Synonym: Nther_1351

Alternate gene names: 188585977

Gene position: 1424049-1424819 (Clockwise)

Preceding gene: 188585975

Following gene: 188585978

Centisome position: 44.99

GC content: 38.0

Gene sequence:

>771_bases
TTGACTAAAAAAATAGGTTTAGCTTTGAGCGCCGGCTCAGCCCGGGGCTTGGCTCATATAGGTGTTTTAAAAACATTAAT
TGACAATAATATTCCAATTGATTGCATTGCAGGAACCAGTATGGGTAGTATGGTAGGAGGTTTGTATGCTGCAGGGATAC
CAATTGATATTATCGAGGGCTTATCTTTAAATTTAACACAAAAAAAATGGGTGGATATAGGTGTGCCTAGAAAGGGATTT
ATTCGAGGTGATAAAGTTTTACAAATTCTGCGCATGTTAACTAAAGACAGCGCTATTGAAAATACCAAAATTCCCTTTGG
TTGTGTGGCGACTGAATTAAACACTGGAGAACGAATTGTTTACAAACAAGGGAATTTAGCGGAAGCTATCAGGGCAAGTA
TTTCTATTCCGGGAGTTTTTACTCCATACGAATACGAAGGAAAAACTCTAGTAGATGGGGCATTAGTAGACCGACTACCT
GTAAGTTTGTGTCGCGCTTTAGGAGCCGATTGTGTAATTTCAGTAGATGTGAGTACCCACGTGTCTAATGCTAGTATTAC
TAATATATTTGATGTGATAGTCCAATCAATGAATATAATGCAAGCTGAAATGTTAAAAGAAAGAAGAGAAGATAGCGATA
TTCTGATTAGGCCTGATGTACAAAGTATTACACCCAATCAATTCCAAAAGGCAGAAGAAGCTATTGAAGCAGGCAAAGAA
GCATGTCAGGAAGTTTTACCAGCTTTAAAACAAGTAGTCGAGGAGTGTTAA

Upstream 100 bases:

>100_bases
TCCTTTAATGTTATCCATAATCAATTCCTCCTTAAAACCGGGTACATTATCATTTATATTGGTAAAAAAGGGGAATATAC
TTAGATTAGAGGTGGTTATT

Downstream 100 bases:

>100_bases
AAAATGACTAACTCTAAATCACTCATTGCAAGAATTTTACAAACCTTTGCTGTAGTTGCCGTCCTAATATTATTACTAAG
TCAGGTGACGCCAGATTATT

Product: Patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MTKKIGLALSAGSARGLAHIGVLKTLIDNNIPIDCIAGTSMGSMVGGLYAAGIPIDIIEGLSLNLTQKKWVDIGVPRKGF
IRGDKVLQILRMLTKDSAIENTKIPFGCVATELNTGERIVYKQGNLAEAIRASISIPGVFTPYEYEGKTLVDGALVDRLP
VSLCRALGADCVISVDVSTHVSNASITNIFDVIVQSMNIMQAEMLKERREDSDILIRPDVQSITPNQFQKAEEAIEAGKE
ACQEVLPALKQVVEEC

Sequences:

>Translated_256_residues
MTKKIGLALSAGSARGLAHIGVLKTLIDNNIPIDCIAGTSMGSMVGGLYAAGIPIDIIEGLSLNLTQKKWVDIGVPRKGF
IRGDKVLQILRMLTKDSAIENTKIPFGCVATELNTGERIVYKQGNLAEAIRASISIPGVFTPYEYEGKTLVDGALVDRLP
VSLCRALGADCVISVDVSTHVSNASITNIFDVIVQSMNIMQAEMLKERREDSDILIRPDVQSITPNQFQKAEEAIEAGKE
ACQEVLPALKQVVEEC
>Mature_255_residues
TKKIGLALSAGSARGLAHIGVLKTLIDNNIPIDCIAGTSMGSMVGGLYAAGIPIDIIEGLSLNLTQKKWVDIGVPRKGFI
RGDKVLQILRMLTKDSAIENTKIPFGCVATELNTGERIVYKQGNLAEAIRASISIPGVFTPYEYEGKTLVDGALVDRLPV
SLCRALGADCVISVDVSTHVSNASITNIFDVIVQSMNIMQAEMLKERREDSDILIRPDVQSITPNQFQKAEEAIEAGKEA
CQEVLPALKQVVEEC

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=192, Percent_Identity=31.25, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI116256487, Length=192, Percent_Identity=31.25, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI260656039, Length=192, Percent_Identity=31.25, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI260656043, Length=192, Percent_Identity=31.25, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI260656037, Length=192, Percent_Identity=31.25, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI148727290, Length=202, Percent_Identity=30.1980198019802, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI148727335, Length=202, Percent_Identity=30.1980198019802, Blast_Score=99, Evalue=4e-21,
Organism=Escherichia coli, GI226510936, Length=298, Percent_Identity=34.2281879194631, Blast_Score=147, Evalue=8e-37,
Organism=Caenorhabditis elegans, GI71997289, Length=270, Percent_Identity=27.4074074074074, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71997299, Length=270, Percent_Identity=27.4074074074074, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI193204778, Length=193, Percent_Identity=31.0880829015544, Blast_Score=87, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6323581, Length=268, Percent_Identity=27.2388059701493, Blast_Score=105, Evalue=5e-24,
Organism=Drosophila melanogaster, GI281376913, Length=195, Percent_Identity=31.2820512820513, Blast_Score=91, Evalue=8e-19,
Organism=Drosophila melanogaster, GI28571388, Length=195, Percent_Identity=29.7435897435897, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 27567; Mature: 27436

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKIGLALSAGSARGLAHIGVLKTLIDNNIPIDCIAGTSMGSMVGGLYAAGIPIDIIEG
CCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHCC
LSLNLTQKKWVDIGVPRKGFIRGDKVLQILRMLTKDSAIENTKIPFGCVATELNTGERIV
CCCCCCHHHHEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEE
YKQGNLAEAIRASISIPGVFTPYEYEGKTLVDGALVDRLPVSLCRALGADCVISVDVSTH
EECCCHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCCCEEEEEEHHHC
VSNASITNIFDVIVQSMNIMQAEMLKERREDSDILIRPDVQSITPNQFQKAEEAIEAGKE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHH
ACQEVLPALKQVVEEC
HHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TKKIGLALSAGSARGLAHIGVLKTLIDNNIPIDCIAGTSMGSMVGGLYAAGIPIDIIEG
CCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHCC
LSLNLTQKKWVDIGVPRKGFIRGDKVLQILRMLTKDSAIENTKIPFGCVATELNTGERIV
CCCCCCHHHHEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEE
YKQGNLAEAIRASISIPGVFTPYEYEGKTLVDGALVDRLPVSLCRALGADCVISVDVSTH
EECCCHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCCCEEEEEEHHHC
VSNASITNIFDVIVQSMNIMQAEMLKERREDSDILIRPDVQSITPNQFQKAEEAIEAGKE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHH
ACQEVLPALKQVVEEC
HHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]