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The map label for this gene is ylbJ [H]

Identifier: 188585976

GI number: 188585976

Start: 1422716

End: 1423966

Strand: Reverse

Name: ylbJ [H]

Synonym: Nther_1350

Alternate gene names: 188585976

Gene position: 1423966-1422716 (Counterclockwise)

Preceding gene: 188585979

Following gene: 188585969

Centisome position: 44.98

GC content: 36.29

Gene sequence:

>1251_bases
ATGGATAACATTAAAGGAGGGAAATTATTTCATCTATTCCTATCATGTAGTGCAGCATTTCTAACCATTTCTTTAATACT
TTTTCCTGATAGGGCTTTTGACGCGGCAGTTGATGGCCTTAATATTTGGTGGGAAGTAGTTTTTCCGGCTTTACTACCTT
TTTTTATCGGGGCAGAAATTTTAATGGGTCTCGGCGTTGTCCACTTCATGGGAGTTATGTTAGAACCATTAATGAGGCCA
ATATTTAATGTGCCTGGAGCCGGTTCTTTTGTTATGGCAGTAGGTTTGGCTTCTGGATTTCCCATTGGGTCCATTCTAAC
ATCCAAGCTTAGAAGGGACAGTATGCTTACTAAAACTGAGGCGGAAAGATTATTGTGCTTTACCAATACTGCTGATCCAC
TTTTTATGTTCGGGGCTGTAGCAGTAGGAATGTTTCACAATGCCCAATTAGGTTTAATGATAGCTGCAGCCCATTATATG
TCTAGTTTTACTGTGGGTTTATTAATGCGATTTTACAAAAAAAATAGTTCTGATATAACAAAAGAACCAAAAAGCCAAGA
ACATATAGTTATTAGAGCATTTAAAGCTATGTTCGATGCAAAAGACCGGGACGGACGCACCATGGGTAAATTATTAGGGG
ATGCAATAAAAAACTCGGTCAACAATTTATTACTTATCGGAGGCTTTATTATACTTTTTTCAGTAATTATAAGAATTTTA
ACAGTTGTAGGAGTAGTTGATTTGATAACAGCAATTTTGGCACCAATTTTTGTATCTGTGGGGCTAGAGCCCGATTTAAT
TCCAGCAATTATTAGTGGTTTTTTCGAAATTTCTCTTGGCTCCGAAATCGCCGGCAATTTGCCTGCTGAAATTCCTTTAG
TACAAAAGTTAATGGCTGTGGGAGCAATCATCGCTTGGAGTGGTTTATCAGTCCATGCACAAGTTGCAAGTATAACCAGT
GATACAGATATTAACATTATTCCTTTTATATGTGCTAGAGTGGTACACGGATTGTTAGCAGCAATTTATACAATACCAGT
TGTAAATTATATTTTCGCTGATATCAGTCTTTCTCATACAGTAACGGCAATTTCCAAAACAGGGACAGAATTAATTTATA
CTTGGGGTTTAGGAGTCACTTGGTCCCTAAGTGTATTTATTATCCTAATATTGTTCACAATTTTACTAATGTTATTATAT
ACTCTAGGGATTAGCAAAAAAGTATTAGTCCTGTTTAAAAACCGTAAATAA

Upstream 100 bases:

>100_bases
ACCTATTTTTTTAGTCAAAATAACCACCTCTAATCTAAGTATATTCCCCTTTTTTACCAATATAAATGATAATGTACCCG
GTTTTAAGGAGGAATTGATT

Downstream 100 bases:

>100_bases
TTACGGATATATGATATCATTTCCTTTGAGAGTTCCTTTTTTCAATAATGTAGTCTTGAATTTGTTCTGGTACTAATCCC
TCAATACATCCATCAAAAGC

Product: sporulation integral membrane protein YlbJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MDNIKGGKLFHLFLSCSAAFLTISLILFPDRAFDAAVDGLNIWWEVVFPALLPFFIGAEILMGLGVVHFMGVMLEPLMRP
IFNVPGAGSFVMAVGLASGFPIGSILTSKLRRDSMLTKTEAERLLCFTNTADPLFMFGAVAVGMFHNAQLGLMIAAAHYM
SSFTVGLLMRFYKKNSSDITKEPKSQEHIVIRAFKAMFDAKDRDGRTMGKLLGDAIKNSVNNLLLIGGFIILFSVIIRIL
TVVGVVDLITAILAPIFVSVGLEPDLIPAIISGFFEISLGSEIAGNLPAEIPLVQKLMAVGAIIAWSGLSVHAQVASITS
DTDINIIPFICARVVHGLLAAIYTIPVVNYIFADISLSHTVTAISKTGTELIYTWGLGVTWSLSVFIILILFTILLMLLY
TLGISKKVLVLFKNRK

Sequences:

>Translated_416_residues
MDNIKGGKLFHLFLSCSAAFLTISLILFPDRAFDAAVDGLNIWWEVVFPALLPFFIGAEILMGLGVVHFMGVMLEPLMRP
IFNVPGAGSFVMAVGLASGFPIGSILTSKLRRDSMLTKTEAERLLCFTNTADPLFMFGAVAVGMFHNAQLGLMIAAAHYM
SSFTVGLLMRFYKKNSSDITKEPKSQEHIVIRAFKAMFDAKDRDGRTMGKLLGDAIKNSVNNLLLIGGFIILFSVIIRIL
TVVGVVDLITAILAPIFVSVGLEPDLIPAIISGFFEISLGSEIAGNLPAEIPLVQKLMAVGAIIAWSGLSVHAQVASITS
DTDINIIPFICARVVHGLLAAIYTIPVVNYIFADISLSHTVTAISKTGTELIYTWGLGVTWSLSVFIILILFTILLMLLY
TLGISKKVLVLFKNRK
>Mature_416_residues
MDNIKGGKLFHLFLSCSAAFLTISLILFPDRAFDAAVDGLNIWWEVVFPALLPFFIGAEILMGLGVVHFMGVMLEPLMRP
IFNVPGAGSFVMAVGLASGFPIGSILTSKLRRDSMLTKTEAERLLCFTNTADPLFMFGAVAVGMFHNAQLGLMIAAAHYM
SSFTVGLLMRFYKKNSSDITKEPKSQEHIVIRAFKAMFDAKDRDGRTMGKLLGDAIKNSVNNLLLIGGFIILFSVIIRIL
TVVGVVDLITAILAPIFVSVGLEPDLIPAIISGFFEISLGSEIAGNLPAEIPLVQKLMAVGAIIAWSGLSVHAQVASITS
DTDINIIPFICARVVHGLLAAIYTIPVVNYIFADISLSHTVTAISKTGTELIYTWGLGVTWSLSVFIILILFTILLMLLY
TLGISKKVLVLFKNRK

Specific function: Required for spore cortex formation [H]

COG id: COG3314

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642
- InterPro:   IPR014226 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 45147; Mature: 45147

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
>Mature Secondary Structure
MDNIKGGKLFHLFLSCSAAFLTISLILFPDRAFDAAVDGLNIWWEVVFPALLPFFIGAEI
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LMGLGVVHFMGVMLEPLMRPIFNVPGAGSFVMAVGLASGFPIGSILTSKLRRDSMLTKTE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AERLLCFTNTADPLFMFGAVAVGMFHNAQLGLMIAAAHYMSSFTVGLLMRFYKKNSSDIT
HHHEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
KEPKSQEHIVIRAFKAMFDAKDRDGRTMGKLLGDAIKNSVNNLLLIGGFIILFSVIIRIL
CCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVVGVVDLITAILAPIFVSVGLEPDLIPAIISGFFEISLGSEIAGNLPAEIPLVQKLMAV
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHH
GAIIAWSGLSVHAQVASITSDTDINIIPFICARVVHGLLAAIYTIPVVNYIFADISLSHT
HHHHHCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
VTAISKTGTELIYTWGLGVTWSLSVFIILILFTILLMLLYTLGISKKVLVLFKNRK
HHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 12662922 [H]