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The map label for this gene is yloC [H]

Identifier: 188585953

GI number: 188585953

Start: 1401686

End: 1402561

Strand: Direct

Name: yloC [H]

Synonym: Nther_1327

Alternate gene names: 188585953

Gene position: 1401686-1402561 (Clockwise)

Preceding gene: 188585952

Following gene: 188585954

Centisome position: 44.28

GC content: 35.27

Gene sequence:

>876_bases
TTGTACAGCATGACAGGATTTGGTAGTGGTGATATCTCAGCTCCTGAAATGGAGGGAAAAGTTGACGTTAAAACCCTTAA
TCACAAATACTTGGATATTAATGTGAAAGGGCCTAAGGAACTGTTTTCTTTAGAGGATAAAATTAGACAAGAAATTTCTC
GGAAAGTGGCCAGAGGTAGAGTTGAAGTTAGGTTTAAAATCCATTTTACAGATCAACAAAACATTGAAGCCAAGTTTAAT
AAATCTCTGGCAGAAAGTTACTGGCAAGGATTGCAAGAGCTTAAAAAATTAACGGGAGAGGCTGAACAGCCGCTACTTCC
AGTTTTGGCAAAAATGCCTGAAGTTTTTTCTCTAGAGCAATCCGATATAGACGAAGAGAGTGCCTGGGAGGCTATATATC
ATGGCATTTTAGAAGCATTAGATGAAGTAGTGGAAATGAAAGAGCGAGAAGGTAAGAAATTAAAAACTGATATCATTGAT
CAGAGCAAGCATTTACAAGAGATTGTTTCAGAAATAGATAATAGAAAGTCTTATTCTGAAAACAAAGGATATGAAAGATT
GACTCAACGCCTAAGCGAACTTTTAAGCGAACACGACATTGATGAAAATCGTATTATTCAAGAAGCAGCAATTTATTCGG
ATAAAGCTAATATAGATGAAGAGCTGGTTCGCATGCATAGTCACCTCAATCAAATAGAACAGTTTGTAGAGGAAGAAGGT
GCTATAGGGAAAAAACTTGATTTCCTAGTTCAAGAAATGATTAGAGAAATTAATACTATTGCTTCAAAATCCAATGATGA
AATTATTTCAAAGTTAGTAATCGAAGCCAAGAGTATTATAGAAAAAATTAGAGAACAGGTGCAGAATGTAGAATGA

Upstream 100 bases:

>100_bases
AGAATTTTGACAATTAAATAGTGATTAAATATAATCAAATCGGCTAGAATTAATTAAATAGAGTTATATAACAGTTGTAT
CACACAAGGGGGCTCCAAAA

Downstream 100 bases:

>100_bases
TTGAGAATATTAAAGACAACTTGCATTATTCCTATATTTTAAGCTATACTAGAGGTATGCATGATATGGGAAGACTAAAA
AAGGAGGAGATGACGTGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MYSMTGFGSGDISAPEMEGKVDVKTLNHKYLDINVKGPKELFSLEDKIRQEISRKVARGRVEVRFKIHFTDQQNIEAKFN
KSLAESYWQGLQELKKLTGEAEQPLLPVLAKMPEVFSLEQSDIDEESAWEAIYHGILEALDEVVEMKEREGKKLKTDIID
QSKHLQEIVSEIDNRKSYSENKGYERLTQRLSELLSEHDIDENRIIQEAAIYSDKANIDEELVRMHSHLNQIEQFVEEEG
AIGKKLDFLVQEMIREINTIASKSNDEIISKLVIEAKSIIEKIREQVQNVE

Sequences:

>Translated_291_residues
MYSMTGFGSGDISAPEMEGKVDVKTLNHKYLDINVKGPKELFSLEDKIRQEISRKVARGRVEVRFKIHFTDQQNIEAKFN
KSLAESYWQGLQELKKLTGEAEQPLLPVLAKMPEVFSLEQSDIDEESAWEAIYHGILEALDEVVEMKEREGKKLKTDIID
QSKHLQEIVSEIDNRKSYSENKGYERLTQRLSELLSEHDIDENRIIQEAAIYSDKANIDEELVRMHSHLNQIEQFVEEEG
AIGKKLDFLVQEMIREINTIASKSNDEIISKLVIEAKSIIEKIREQVQNVE
>Mature_291_residues
MYSMTGFGSGDISAPEMEGKVDVKTLNHKYLDINVKGPKELFSLEDKIRQEISRKVARGRVEVRFKIHFTDQQNIEAKFN
KSLAESYWQGLQELKKLTGEAEQPLLPVLAKMPEVFSLEQSDIDEESAWEAIYHGILEALDEVVEMKEREGKKLKTDIID
QSKHLQEIVSEIDNRKSYSENKGYERLTQRLSELLSEHDIDENRIIQEAAIYSDKANIDEELVRMHSHLNQIEQFVEEEG
AIGKKLDFLVQEMIREINTIASKSNDEIISKLVIEAKSIIEKIREQVQNVE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=293, Percent_Identity=27.9863481228669, Blast_Score=111, Evalue=7e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 33591; Mature: 33591

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSMTGFGSGDISAPEMEGKVDVKTLNHKYLDINVKGPKELFSLEDKIRQEISRKVARGR
CCCCCCCCCCCCCCCCCCCCEEHEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCC
VEVRFKIHFTDQQNIEAKFNKSLAESYWQGLQELKKLTGEAEQPLLPVLAKMPEVFSLEQ
EEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHCCCH
SDIDEESAWEAIYHGILEALDEVVEMKEREGKKLKTDIIDQSKHLQEIVSEIDNRKSYSE
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NKGYERLTQRLSELLSEHDIDENRIIQEAAIYSDKANIDEELVRMHSHLNQIEQFVEEEG
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
AIGKKLDFLVQEMIREINTIASKSNDEIISKLVIEAKSIIEKIREQVQNVE
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYSMTGFGSGDISAPEMEGKVDVKTLNHKYLDINVKGPKELFSLEDKIRQEISRKVARGR
CCCCCCCCCCCCCCCCCCCCEEHEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCC
VEVRFKIHFTDQQNIEAKFNKSLAESYWQGLQELKKLTGEAEQPLLPVLAKMPEVFSLEQ
EEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHCCCH
SDIDEESAWEAIYHGILEALDEVVEMKEREGKKLKTDIIDQSKHLQEIVSEIDNRKSYSE
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NKGYERLTQRLSELLSEHDIDENRIIQEAAIYSDKANIDEELVRMHSHLNQIEQFVEEEG
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
AIGKKLDFLVQEMIREINTIASKSNDEIISKLVIEAKSIIEKIREQVQNVE
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]