Click here to switch to the map view.

The map label for this gene is 188585868

Identifier: 188585868

GI number: 188585868

Start: 1312431

End: 1312910

Strand: Direct

Name: 188585868

Synonym: Nther_1242

Alternate gene names: NA

Gene position: 1312431-1312910 (Clockwise)

Preceding gene: 188585867

Following gene: 188585869

Centisome position: 41.46

GC content: 28.33

Gene sequence:

>480_bases
ATGAAGATAGGTAAGCAAGGAGAAAAGAAGGTAGATGAATTTCTGAATAATAAGAAAAATATAAGAAATGTTATTGATGT
TTCTGATAACGAAGAATATATGGAAAAGGGAATTGATTTTCTAATTGAGACTGAAAGCGGAAATAAGCAAGGAATAGAAG
TAAAAACAGATACTTATTATAGTAGTGGAAATTTCTTTTTAGAGTATATAGCAAACACAAACAAAAATAAAACTGGTGCA
TTGTTAAGCAGTCACGCCAAGTGGCTGTTTTATTATTTTATAGATGGTACTTTATATATCTTTAAATTATCTGATCTGAA
AAAGTGGATAAAGAAAAATAAAAAGAAATATAAAAAAGTTTCTTCTCAAAACCCAACTTATAAAAGTTTAGGGTTGTTAG
TTTCTAGAGAAGAATTGATTGAAGAACTGAATCCAAGTATTTATCAAATTGGAGGTATCCAAGATGATGGAGTTGCGTAA

Upstream 100 bases:

>100_bases
AAGGAGGTTTAAAAACTGAATATGGTTATACCGTTGGAGCAAAAAGGAGTCTAGGGAATGAACTAGACCGTATGTTATGA
CACATAAATTTTGGGATTCT

Downstream 100 bases:

>100_bases
AGCATTAAGACAGTTGCCTACACGAAAAAAACATTACTTTGAGTGGAAATTTAATGTTAAGCCAAGAGTTGATTTAAGTA
ATTTATCAGAACAGGAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MKIGKQGEKKVDEFLNNKKNIRNVIDVSDNEEYMEKGIDFLIETESGNKQGIEVKTDTYYSSGNFFLEYIANTNKNKTGA
LLSSHAKWLFYYFIDGTLYIFKLSDLKKWIKKNKKKYKKVSSQNPTYKSLGLLVSREELIEELNPSIYQIGGIQDDGVA

Sequences:

>Translated_159_residues
MKIGKQGEKKVDEFLNNKKNIRNVIDVSDNEEYMEKGIDFLIETESGNKQGIEVKTDTYYSSGNFFLEYIANTNKNKTGA
LLSSHAKWLFYYFIDGTLYIFKLSDLKKWIKKNKKKYKKVSSQNPTYKSLGLLVSREELIEELNPSIYQIGGIQDDGVA
>Mature_159_residues
MKIGKQGEKKVDEFLNNKKNIRNVIDVSDNEEYMEKGIDFLIETESGNKQGIEVKTDTYYSSGNFFLEYIANTNKNKTGA
LLSSHAKWLFYYFIDGTLYIFKLSDLKKWIKKNKKKYKKVSSQNPTYKSLGLLVSREELIEELNPSIYQIGGIQDDGVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18329; Mature: 18329

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGKQGEKKVDEFLNNKKNIRNVIDVSDNEEYMEKGIDFLIETESGNKQGIEVKTDTYY
CCCCCCHHHHHHHHHCCHHHHHHHCCCCCCHHHHHCCCEEEEECCCCCCCCEEEEECEEE
SSGNFFLEYIANTNKNKTGALLSSHAKWLFYYFIDGTLYIFKLSDLKKWIKKNKKKYKKV
CCCCEEEEEEECCCCCCCHHHHHHCCCEEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHH
SSQNPTYKSLGLLVSREELIEELNPSIYQIGGIQDDGVA
CCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MKIGKQGEKKVDEFLNNKKNIRNVIDVSDNEEYMEKGIDFLIETESGNKQGIEVKTDTYY
CCCCCCHHHHHHHHHCCHHHHHHHCCCCCCHHHHHCCCEEEEECCCCCCCCEEEEECEEE
SSGNFFLEYIANTNKNKTGALLSSHAKWLFYYFIDGTLYIFKLSDLKKWIKKNKKKYKKV
CCCCEEEEEEECCCCCCCHHHHHHCCCEEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHH
SSQNPTYKSLGLLVSREELIEELNPSIYQIGGIQDDGVA
CCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA