| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188585866
Identifier: 188585866
GI number: 188585866
Start: 1310474
End: 1311991
Strand: Direct
Name: 188585866
Synonym: Nther_1240
Alternate gene names: NA
Gene position: 1310474-1311991 (Clockwise)
Preceding gene: 188585865
Following gene: 188585867
Centisome position: 41.4
GC content: 28.72
Gene sequence:
>1518_bases ATGTATTCACCAAAACTGGATGAGGATATTCAACAGAAGCTAATTGATAAGATTTATGACTTATATATTTATAGAACTGA TAAATATCTTAAACAAAATCCAGGGAAAGAATTTATGACTTTAACAAAAGGGAAAACTACCAAAAAACCATTATTACCCT TTATGATTAAAGCACACTTAGAACAAAATTATACAATTGGTACTTTTGCAGGAAAAGGAAAGAACAACAGGACTTATACT AAATTTATATGTTTTGACGTTGATTTGAAGGAAGATGATAACCTTGCCAAGTGGTTTACCTACAAAGTTGCTGAAACTTT AAGAGAAATGGGAATCAATGAATATTACATTAGCCATTCTGGGGGAAAAGGTTATCATATAGAAGTTTTCTTTGAAGATT TAATACCAGTTAAATTAGCATATAAGTTTTACTTGTTAGTTTTACGATTTACAGATCTGTATAGCTATTCAGATAAGGGT AAAATTGAATTTAGACCAACAGAAAAAGAAGGAGTAAAGCTCCCTTTAGGGTTAAATCAGAAATATTATCAAACAGGTGG TTATTGTGGTTTTTGTTCTGAATTTGAAAGATTGAGAATGTTAGATGAACAGGAAGAAATTAATTATTTCTTAAATATCC AAAAAATAAAAAGAAAGAAAATCTCAAAAATAGTAAAGAAATATAAAAATTATTTTGAAGAAAGTAATAAAAAGATTCAA GAAAATAAAAAGACTGGAACTATAGAAAATGAGATTGAAGAAACAGGTGAAGTCCTTGAACAATATCAAGAATTGGGAAT ATATAATCAAACAGAGGATGAAATATTCAGCAAAGCAATGGATTATTATAGAAACGGATTAAAGCGGACAGGAACTAGAC ACAATGTTTGTCTGTTATTAGCAAAGTTTTTGAGATATAACGGATTAGAAAAAGGTGAAGCAGAACAGGAATTAAAGAAT TGGATGAAAAGACAGGATGAAAAGACTTATAGAACGCCATTGGAGGATTCATTGAAAGATATAGAAAAAATTGTTAATTG GGTTTATGAAAATAATAAGAGTCTAGTACCGCCTAAAAAGGATTTATCAATCAGTTTTGACGAGATTAACACGATAGTTA CTAACTGTCCACAAAAAAATCAAAAGTTATTAATGTACGCACTTCTAGTACATTCCAAAAGATACGCCACTGAAGGTGGC GTTTTTTATATGACTTTTAAACAGATGGAAGAAACTACTGGATTAGGTTTTAGGACAGTTTTTAGGCAAATTAATGAATT AGAAGAATTAAAGATGATTGAAGTTGTGGAAAGAAATGGTAAAAACTTTGAATATGATTACAGTTTGCAAAAACCAATTA GTAAGCCAAATAGATATAGAATAAAAATGAAAAATGAAAATCAAAGCGAAAAAATTGAATTGAAAGACAATTTTCAAGAT TGTTTGTTGGAATTTTATTCTGATAAGCAGTTAAAAGACTTGTTACCAAGGAGACAGTATCAATATTTTATTAGTTAA
Upstream 100 bases:
>100_bases AAATGTTTTCTTATTCAACAACACCAAAGAATTAAGAGATACTGTAGAGTTGTATAAGGAATTTAAAGACAAAATCTTTA GATAGAAAGGGGCGTAATGA
Downstream 100 bases:
>100_bases TAGCTATATTACTATCTATATATCAATATACTGTTATTATACTCTGATTACTATTATATATATATCGTTGTATGTCAAAT TGTACATAAATATCAATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MYSPKLDEDIQQKLIDKIYDLYIYRTDKYLKQNPGKEFMTLTKGKTTKKPLLPFMIKAHLEQNYTIGTFAGKGKNNRTYT KFICFDVDLKEDDNLAKWFTYKVAETLREMGINEYYISHSGGKGYHIEVFFEDLIPVKLAYKFYLLVLRFTDLYSYSDKG KIEFRPTEKEGVKLPLGLNQKYYQTGGYCGFCSEFERLRMLDEQEEINYFLNIQKIKRKKISKIVKKYKNYFEESNKKIQ ENKKTGTIENEIEETGEVLEQYQELGIYNQTEDEIFSKAMDYYRNGLKRTGTRHNVCLLLAKFLRYNGLEKGEAEQELKN WMKRQDEKTYRTPLEDSLKDIEKIVNWVYENNKSLVPPKKDLSISFDEINTIVTNCPQKNQKLLMYALLVHSKRYATEGG VFYMTFKQMEETTGLGFRTVFRQINELEELKMIEVVERNGKNFEYDYSLQKPISKPNRYRIKMKNENQSEKIELKDNFQD CLLEFYSDKQLKDLLPRRQYQYFIS
Sequences:
>Translated_505_residues MYSPKLDEDIQQKLIDKIYDLYIYRTDKYLKQNPGKEFMTLTKGKTTKKPLLPFMIKAHLEQNYTIGTFAGKGKNNRTYT KFICFDVDLKEDDNLAKWFTYKVAETLREMGINEYYISHSGGKGYHIEVFFEDLIPVKLAYKFYLLVLRFTDLYSYSDKG KIEFRPTEKEGVKLPLGLNQKYYQTGGYCGFCSEFERLRMLDEQEEINYFLNIQKIKRKKISKIVKKYKNYFEESNKKIQ ENKKTGTIENEIEETGEVLEQYQELGIYNQTEDEIFSKAMDYYRNGLKRTGTRHNVCLLLAKFLRYNGLEKGEAEQELKN WMKRQDEKTYRTPLEDSLKDIEKIVNWVYENNKSLVPPKKDLSISFDEINTIVTNCPQKNQKLLMYALLVHSKRYATEGG VFYMTFKQMEETTGLGFRTVFRQINELEELKMIEVVERNGKNFEYDYSLQKPISKPNRYRIKMKNENQSEKIELKDNFQD CLLEFYSDKQLKDLLPRRQYQYFIS >Mature_505_residues MYSPKLDEDIQQKLIDKIYDLYIYRTDKYLKQNPGKEFMTLTKGKTTKKPLLPFMIKAHLEQNYTIGTFAGKGKNNRTYT KFICFDVDLKEDDNLAKWFTYKVAETLREMGINEYYISHSGGKGYHIEVFFEDLIPVKLAYKFYLLVLRFTDLYSYSDKG KIEFRPTEKEGVKLPLGLNQKYYQTGGYCGFCSEFERLRMLDEQEEINYFLNIQKIKRKKISKIVKKYKNYFEESNKKIQ ENKKTGTIENEIEETGEVLEQYQELGIYNQTEDEIFSKAMDYYRNGLKRTGTRHNVCLLLAKFLRYNGLEKGEAEQELKN WMKRQDEKTYRTPLEDSLKDIEKIVNWVYENNKSLVPPKKDLSISFDEINTIVTNCPQKNQKLLMYALLVHSKRYATEGG VFYMTFKQMEETTGLGFRTVFRQINELEELKMIEVVERNGKNFEYDYSLQKPISKPNRYRIKMKNENQSEKIELKDNFQD CLLEFYSDKQLKDLLPRRQYQYFIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60280; Mature: 60280
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSPKLDEDIQQKLIDKIYDLYIYRTDKYLKQNPGKEFMTLTKGKTTKKPLLPFMIKAHL CCCCCCCHHHHHHHHHHHHHHHEEECCHHHHHCCCCHHEEEECCCCCCCCHHHHHHHHHH EQNYTIGTFAGKGKNNRTYTKFICFDVDLKEDDNLAKWFTYKVAETLREMGINEYYISHS CCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECC GGKGYHIEVFFEDLIPVKLAYKFYLLVLRFTDLYSYSDKGKIEFRPTEKEGVKLPLGLNQ CCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEECCCCCC KYYQTGGYCGFCSEFERLRMLDEQEEINYFLNIQKIKRKKISKIVKKYKNYFEESNKKIQ HHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENKKTGTIENEIEETGEVLEQYQELGIYNQTEDEIFSKAMDYYRNGLKRTGTRHNVCLLL HCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH AKFLRYNGLEKGEAEQELKNWMKRQDEKTYRTPLEDSLKDIEKIVNWVYENNKSLVPPKK HHHHHHCCCCCCCHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC DLSISFDEINTIVTNCPQKNQKLLMYALLVHSKRYATEGGVFYMTFKQMEETTGLGFRTV CCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCHHHHH FRQINELEELKMIEVVERNGKNFEYDYSLQKPISKPNRYRIKMKNENQSEKIELKDNFQD HHHHHHHHHHHHHHHHHCCCCCCEECCCHHCCCCCCCCEEEEECCCCCCCEEEECCCHHH CLLEFYSDKQLKDLLPRRQYQYFIS HHHHHHCCCHHHHHCCHHHHHHHCC >Mature Secondary Structure MYSPKLDEDIQQKLIDKIYDLYIYRTDKYLKQNPGKEFMTLTKGKTTKKPLLPFMIKAHL CCCCCCCHHHHHHHHHHHHHHHEEECCHHHHHCCCCHHEEEECCCCCCCCHHHHHHHHHH EQNYTIGTFAGKGKNNRTYTKFICFDVDLKEDDNLAKWFTYKVAETLREMGINEYYISHS CCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECC GGKGYHIEVFFEDLIPVKLAYKFYLLVLRFTDLYSYSDKGKIEFRPTEKEGVKLPLGLNQ CCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEECCCCCC KYYQTGGYCGFCSEFERLRMLDEQEEINYFLNIQKIKRKKISKIVKKYKNYFEESNKKIQ HHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENKKTGTIENEIEETGEVLEQYQELGIYNQTEDEIFSKAMDYYRNGLKRTGTRHNVCLLL HCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH AKFLRYNGLEKGEAEQELKNWMKRQDEKTYRTPLEDSLKDIEKIVNWVYENNKSLVPPKK HHHHHHCCCCCCCHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC DLSISFDEINTIVTNCPQKNQKLLMYALLVHSKRYATEGGVFYMTFKQMEETTGLGFRTV CCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCHHHHH FRQINELEELKMIEVVERNGKNFEYDYSLQKPISKPNRYRIKMKNENQSEKIELKDNFQD HHHHHHHHHHHHHHHHHCCCCCCEECCCHHCCCCCCCCEEEEECCCCCCCEEEECCCHHH CLLEFYSDKQLKDLLPRRQYQYFIS HHHHHHCCCHHHHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA