| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188585861
Identifier: 188585861
GI number: 188585861
Start: 1308029
End: 1308898
Strand: Direct
Name: 188585861
Synonym: Nther_1235
Alternate gene names: NA
Gene position: 1308029-1308898 (Clockwise)
Preceding gene: 188585860
Following gene: 188585862
Centisome position: 41.32
GC content: 33.91
Gene sequence:
>870_bases ATGTTTACACATAATAACTTTTTACAATATGAAAGTATTGATATGAGTGGAGTTTTAGAAGTTACTAACGTACCACAAAC TCCTATTACATCTTTGTTGATGGTAAGGCAGGTTCAAGCACAAGCTCCACAGGTACATTGGGTAGAAGTTGAGATAGATG AATCTTCGGCTGTTACTCAAGGAGAAGGTGATGATGCTCCAGAACATAAAACTGATAACAGAGAACTTAAAGAAAACTAC CTTGAGATTTTTGGAGCAACAGCAAAGGTCTCAAATACTGCACAGTATTCAACTAGTGAAACTGTGAATGACTTACTAGC ACATGAAGTAGAGTTGAAAACTCAATCCATTCGTAACAGAATGGAAAACAAGTTTATTAATGGTAATAAAAACTTTGCTG ATGGTGTTTATGAAACTGATGGTATTCTTAACTTGATTAATTCTGAAAACCAAAAAACAGAAGATGAATTTAATGAAAAT GTTTTCTTAGATACTTTACAAAAGCTATACGATGCGAATGTACACGATAATATGATTGTTTTCCTTAGACCAGAAGAGAA GATTAAGATTAACCAAGAGTTTAATAACGTAGTTAAATATACTGATACTTTAGATCGAGTAGCAGGATTCGATGCAGAGC AATACATATCTCCTTTTGGTATTGTAAGATTTGCACTTGCACCAAAGTTACCTGCTAATACAATGTTTGTAATTAATCCT GCTTATCTTGAAATGCCAACACTAATTCCATTCACAGCTAGACCACAGAATCCTAGTGGTTCTAAACAGGAAGTATACCT AGAAACACAAGCAGGAGTTAAGCTATTAAACAGTTATGCTGGTTCTACTTTAGAAATTTCTACTGCATAG
Upstream 100 bases:
>100_bases ATAAGTACTCACAAGCTAAACAAGAAGGTAATCCAAAAGAGATGATAAAATCTTTAATCAACAAATAAAGCATACTATAT AATTACAGGAGTGATTGAAT
Downstream 100 bases:
>100_bases TAATTTTAAGGGGCTAGATTTTAATTCTAGCCCCTTCTTATTAAAAAAATATAATTCAACATTTAGAAACAAAGGAGGAG ACAAATGAAATGGTTACCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MFTHNNFLQYESIDMSGVLEVTNVPQTPITSLLMVRQVQAQAPQVHWVEVEIDESSAVTQGEGDDAPEHKTDNRELKENY LEIFGATAKVSNTAQYSTSETVNDLLAHEVELKTQSIRNRMENKFINGNKNFADGVYETDGILNLINSENQKTEDEFNEN VFLDTLQKLYDANVHDNMIVFLRPEEKIKINQEFNNVVKYTDTLDRVAGFDAEQYISPFGIVRFALAPKLPANTMFVINP AYLEMPTLIPFTARPQNPSGSKQEVYLETQAGVKLLNSYAGSTLEISTA
Sequences:
>Translated_289_residues MFTHNNFLQYESIDMSGVLEVTNVPQTPITSLLMVRQVQAQAPQVHWVEVEIDESSAVTQGEGDDAPEHKTDNRELKENY LEIFGATAKVSNTAQYSTSETVNDLLAHEVELKTQSIRNRMENKFINGNKNFADGVYETDGILNLINSENQKTEDEFNEN VFLDTLQKLYDANVHDNMIVFLRPEEKIKINQEFNNVVKYTDTLDRVAGFDAEQYISPFGIVRFALAPKLPANTMFVINP AYLEMPTLIPFTARPQNPSGSKQEVYLETQAGVKLLNSYAGSTLEISTA >Mature_289_residues MFTHNNFLQYESIDMSGVLEVTNVPQTPITSLLMVRQVQAQAPQVHWVEVEIDESSAVTQGEGDDAPEHKTDNRELKENY LEIFGATAKVSNTAQYSTSETVNDLLAHEVELKTQSIRNRMENKFINGNKNFADGVYETDGILNLINSENQKTEDEFNEN VFLDTLQKLYDANVHDNMIVFLRPEEKIKINQEFNNVVKYTDTLDRVAGFDAEQYISPFGIVRFALAPKLPANTMFVINP AYLEMPTLIPFTARPQNPSGSKQEVYLETQAGVKLLNSYAGSTLEISTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32567; Mature: 32567
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTHNNFLQYESIDMSGVLEVTNVPQTPITSLLMVRQVQAQAPQVHWVEVEIDESSAVTQ CCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCC GEGDDAPEHKTDNRELKENYLEIFGATAKVSNTAQYSTSETVNDLLAHEVELKTQSIRNR CCCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH MENKFINGNKNFADGVYETDGILNLINSENQKTEDEFNENVFLDTLQKLYDANVHDNMIV HHHCEECCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCEEE FLRPEEKIKINQEFNNVVKYTDTLDRVAGFDAEQYISPFGIVRFALAPKLPANTMFVINP EECCCCCEEECHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHCCCCCCCEEEEECH AYLEMPTLIPFTARPQNPSGSKQEVYLETQAGVKLLNSYAGSTLEISTA HHCCCCCCCEECCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCEEEEECC >Mature Secondary Structure MFTHNNFLQYESIDMSGVLEVTNVPQTPITSLLMVRQVQAQAPQVHWVEVEIDESSAVTQ CCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCC GEGDDAPEHKTDNRELKENYLEIFGATAKVSNTAQYSTSETVNDLLAHEVELKTQSIRNR CCCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH MENKFINGNKNFADGVYETDGILNLINSENQKTEDEFNENVFLDTLQKLYDANVHDNMIV HHHCEECCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCEEE FLRPEEKIKINQEFNNVVKYTDTLDRVAGFDAEQYISPFGIVRFALAPKLPANTMFVINP EECCCCCEEECHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHCCCCCCCEEEEECH AYLEMPTLIPFTARPQNPSGSKQEVYLETQAGVKLLNSYAGSTLEISTA HHCCCCCCCEECCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA