| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188585859
Identifier: 188585859
GI number: 188585859
Start: 1306683
End: 1307426
Strand: Direct
Name: 188585859
Synonym: Nther_1233
Alternate gene names: NA
Gene position: 1306683-1307426 (Clockwise)
Preceding gene: 188585858
Following gene: 188585860
Centisome position: 41.28
GC content: 30.51
Gene sequence:
>744_bases ATGCCCGAAGAATTTGCAGTTGATTTACAGACTGAAAGAATATTAACAGATGATGATACAGACTTTTTTAGCATTAATTT TCAGACAGGAAGGGAATTATCAAACCCTGAAGAATTTACAGTTTCACTTCAAAGCGGTAGTGAATTAGTTGGAAAAGTAA AATCAAAATTACAGACTGGTAGAGAACTGTTTAGTGATTTTAAAGTTAAATTACAAACTGAAAGATTGGTTGATAGTTTA GGAACAGAATCTTTTTCAGTAGGATTGCAAGCTGCTAGGAATATTTACGGTACTGTGATTAAAAAACTTCAAACTTTAAG AAATATGGAAGATGAAACACTAAAACATGAAGTTTTTGAAACTGCTATGTTACCTCTTGATTATCAAGCTAGTTATATTG ACTTTCAAAATAGGAAGTGGTTTAGCATGATGTATAGTGATGAAATGATTGAGTTTTATAAAGGTGAAAAGAGAAATTTA GGGTTGGAAGTTGAGAGAACAATATACAAATATACAGGTTTTGAGATTGATTCTGTTGATGTTGAGATTAGGAAACTAGA TAACGACCATACCCTAGTTGATGAGGGCGAAGGTAAGATTGATGGAAATAAAGTTTGGTATCTAGTGGATACGACCAAAG AAGATTTTGAGACAGATCAGAGTTATTATATTTATTTTAAAATCAATATTGATAATTCTGATAAGGTAATTATTGATAGA CTTGAATTTGAAATTATTGAATAG
Upstream 100 bases:
>100_bases AGAAAATGAAGATTTGGGGCAATATGATGATGTTCTTATTACTGTTGAAGGTCTTGCAGAAGAAACAGGCGGGGATTTGT GGTAGTTAGGAGTGATTTAG
Downstream 100 bases:
>100_bases TTAGCTGACACAAACTTTATTTGTATTGGTCAAATAAAACTGAGGACTGTGAGTGTTTAGGACTTCTTTTTGAAGGACTA ACACAAAACAGGACTCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MPEEFAVDLQTERILTDDDTDFFSINFQTGRELSNPEEFTVSLQSGSELVGKVKSKLQTGRELFSDFKVKLQTERLVDSL GTESFSVGLQAARNIYGTVIKKLQTLRNMEDETLKHEVFETAMLPLDYQASYIDFQNRKWFSMMYSDEMIEFYKGEKRNL GLEVERTIYKYTGFEIDSVDVEIRKLDNDHTLVDEGEGKIDGNKVWYLVDTTKEDFETDQSYYIYFKINIDNSDKVIIDR LEFEIIE
Sequences:
>Translated_247_residues MPEEFAVDLQTERILTDDDTDFFSINFQTGRELSNPEEFTVSLQSGSELVGKVKSKLQTGRELFSDFKVKLQTERLVDSL GTESFSVGLQAARNIYGTVIKKLQTLRNMEDETLKHEVFETAMLPLDYQASYIDFQNRKWFSMMYSDEMIEFYKGEKRNL GLEVERTIYKYTGFEIDSVDVEIRKLDNDHTLVDEGEGKIDGNKVWYLVDTTKEDFETDQSYYIYFKINIDNSDKVIIDR LEFEIIE >Mature_246_residues PEEFAVDLQTERILTDDDTDFFSINFQTGRELSNPEEFTVSLQSGSELVGKVKSKLQTGRELFSDFKVKLQTERLVDSLG TESFSVGLQAARNIYGTVIKKLQTLRNMEDETLKHEVFETAMLPLDYQASYIDFQNRKWFSMMYSDEMIEFYKGEKRNLG LEVERTIYKYTGFEIDSVDVEIRKLDNDHTLVDEGEGKIDGNKVWYLVDTTKEDFETDQSYYIYFKINIDNSDKVIIDRL EFEIIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28913; Mature: 28781
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEEFAVDLQTERILTDDDTDFFSINFQTGRELSNPEEFTVSLQSGSELVGKVKSKLQTG CCCCEEEEEECCEEECCCCCCEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH RELFSDFKVKLQTERLVDSLGTESFSVGLQAARNIYGTVIKKLQTLRNMEDETLKHEVFE HHHHHHHHEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TAMLPLDYQASYIDFQNRKWFSMMYSDEMIEFYKGEKRNLGLEVERTIYKYTGFEIDSVD HHCCCCCCCCEEEECCCCEEEEHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCEEEECCE VEIRKLDNDHTLVDEGEGKIDGNKVWYLVDTTKEDFETDQSYYIYFKINIDNSDKVIIDR EEEEECCCCCEEEECCCCEECCCEEEEEEECCHHHCCCCCEEEEEEEEEECCCCCEEEEE LEFEIIE EEEEEEC >Mature Secondary Structure PEEFAVDLQTERILTDDDTDFFSINFQTGRELSNPEEFTVSLQSGSELVGKVKSKLQTG CCCEEEEEECCEEECCCCCCEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH RELFSDFKVKLQTERLVDSLGTESFSVGLQAARNIYGTVIKKLQTLRNMEDETLKHEVFE HHHHHHHHEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TAMLPLDYQASYIDFQNRKWFSMMYSDEMIEFYKGEKRNLGLEVERTIYKYTGFEIDSVD HHCCCCCCCCEEEECCCCEEEEHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCEEEECCE VEIRKLDNDHTLVDEGEGKIDGNKVWYLVDTTKEDFETDQSYYIYFKINIDNSDKVIIDR EEEEECCCCCEEEECCCCEECCCEEEEEEECCHHHCCCCCEEEEEEEEEECCCCCEEEEE LEFEIIE EEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA