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The map label for this gene is yrpB [H]

Identifier: 188585784

GI number: 188585784

Start: 1225915

End: 1226988

Strand: Reverse

Name: yrpB [H]

Synonym: Nther_1158

Alternate gene names: 188585784

Gene position: 1226988-1225915 (Counterclockwise)

Preceding gene: 188585802

Following gene: 188585783

Centisome position: 38.76

GC content: 38.64

Gene sequence:

>1074_bases
TTGTCTTTACCATCTTTAAAAATTGGAGAACTAATTGCCAAAGTACCTATTATTCAAGGAGGAATGGGAGTTGGTGTTTC
CCTATCTAGATTAGCTTCAGCTGTAGCTAATCACGGGGGAATCGGAGTAATTTCCGGAGTCCAAATCGGTTATTCTGAAC
CGGATTTCTCTACAAATCCCGATCAAGCAAATCTAAGGGCTTTGACAAAACAAATCAGAAAGGCCAAAGATTTAAGTCCT
TCAGGTATCATTGGGGTCAATCTACTAGCAGCTATTAATAATTATGAAGATATGGTTAAAACAGCTGTCAAAGAAAACAT
AGATGTGATTGTAACAGGGGCTGGGCTACCTAAGAATTTACCAGGTCTAGTAGAAGATGCTAAAACTAAATTAGCACCCA
TTGTATCTTCAGGGAAGGCAGCTTCTTTGATTTGTAAATTATGGGATAAACGTTATAACCGGGTACCTGATATAGTAATT
GTAGAAGGTCCCTTGGCCGGTGGGCATTTAGGTTTTAAAAAACAACAGTTGAACAGTCCCGATTGCTCAACTTTAGAAAA
GCTCATCCCTGAGACCCAAGAGGCCTTACATCCTTTTGCAAAAAAATATGAACGTACTATTCCAGTAGTAGCAGCCGGAG
GAATATTCAACGGACAAGATATTGCAAAGTTTCTAAAGATGGGTGCTCAAGGGGTACAGATGGGAACACGCTTTGTTACC
ACTGAAGAATGCGATGTACATGAAAACTTCAAAAAAGCTTATATAAATTCACGGGAACAAGATATTCAGCTAGTTGATAG
CCCTGTGGGGATGCCCGGAAGAGCCATTTCAAATAATTTCACAAAACAAATTGAAACAAAACGAATCCCCGTTTCAAAGT
GCAATAATTGTCTAAAACCCTGTGATCCCAGTACTAATATTTATTGTATTTCCGAGGCCTTAATCAAGTCCTGTCAAGGA
AATACAACAGATGGTCTAATTTTTTCAGGGACAAATGCTTACAGAACTAATAAATTGACGAGCGTAAAAGATCTAATGAC
AAGTTTAGTCCAAGAAGCGGAACTCGCTTATTAA

Upstream 100 bases:

>100_bases
TTTAAGATAGTATAGAATCATTGACAAGCTGTAACACTATGGATATAATCAACACGTATTTAACTAATAGTTAAATTTTT
AGAAAGTTAGGTGTTATAAA

Downstream 100 bases:

>100_bases
ATTTTGAAACAAAAAAGGACTTAACCAAAAAGTAAACAAATAACTTTTTAAGGGATACGGTCCTATGTATTTTAAAATCA
AAGTAAAAAAGGTAGCTTTA

Product: 2-nitropropane dioxygenase NPD

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MSLPSLKIGELIAKVPIIQGGMGVGVSLSRLASAVANHGGIGVISGVQIGYSEPDFSTNPDQANLRALTKQIRKAKDLSP
SGIIGVNLLAAINNYEDMVKTAVKENIDVIVTGAGLPKNLPGLVEDAKTKLAPIVSSGKAASLICKLWDKRYNRVPDIVI
VEGPLAGGHLGFKKQQLNSPDCSTLEKLIPETQEALHPFAKKYERTIPVVAAGGIFNGQDIAKFLKMGAQGVQMGTRFVT
TEECDVHENFKKAYINSREQDIQLVDSPVGMPGRAISNNFTKQIETKRIPVSKCNNCLKPCDPSTNIYCISEALIKSCQG
NTTDGLIFSGTNAYRTNKLTSVKDLMTSLVQEAELAY

Sequences:

>Translated_357_residues
MSLPSLKIGELIAKVPIIQGGMGVGVSLSRLASAVANHGGIGVISGVQIGYSEPDFSTNPDQANLRALTKQIRKAKDLSP
SGIIGVNLLAAINNYEDMVKTAVKENIDVIVTGAGLPKNLPGLVEDAKTKLAPIVSSGKAASLICKLWDKRYNRVPDIVI
VEGPLAGGHLGFKKQQLNSPDCSTLEKLIPETQEALHPFAKKYERTIPVVAAGGIFNGQDIAKFLKMGAQGVQMGTRFVT
TEECDVHENFKKAYINSREQDIQLVDSPVGMPGRAISNNFTKQIETKRIPVSKCNNCLKPCDPSTNIYCISEALIKSCQG
NTTDGLIFSGTNAYRTNKLTSVKDLMTSLVQEAELAY
>Mature_356_residues
SLPSLKIGELIAKVPIIQGGMGVGVSLSRLASAVANHGGIGVISGVQIGYSEPDFSTNPDQANLRALTKQIRKAKDLSPS
GIIGVNLLAAINNYEDMVKTAVKENIDVIVTGAGLPKNLPGLVEDAKTKLAPIVSSGKAASLICKLWDKRYNRVPDIVIV
EGPLAGGHLGFKKQQLNSPDCSTLEKLIPETQEALHPFAKKYERTIPVVAAGGIFNGQDIAKFLKMGAQGVQMGTRFVTT
EECDVHENFKKAYINSREQDIQLVDSPVGMPGRAISNNFTKQIETKRIPVSKCNNCLKPCDPSTNIYCISEALIKSCQGN
TTDGLIFSGTNAYRTNKLTSVKDLMTSLVQEAELAY

Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 38329; Mature: 38198

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPSLKIGELIAKVPIIQGGMGVGVSLSRLASAVANHGGIGVISGVQIGYSEPDFSTNP
CCCCCCHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCCEEEEECEEECCCCCCCCCCC
DQANLRALTKQIRKAKDLSPSGIIGVNLLAAINNYEDMVKTAVKENIDVIVTGAGLPKNL
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
PGLVEDAKTKLAPIVSSGKAASLICKLWDKRYNRVPDIVIVEGPLAGGHLGFKKQQLNSP
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHCCCC
DCSTLEKLIPETQEALHPFAKKYERTIPVVAAGGIFNGQDIAKFLKMGAQGVQMGTRFVT
CHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCHHHHCCEEEE
TEECDVHENFKKAYINSREQDIQLVDSPVGMPGRAISNNFTKQIETKRIPVSKCNNCLKP
CCCCCHHHHHHHHHHCCCHHHHHEECCCCCCCCHHHHCHHHHHHHHCCCCHHHHHCCCCC
CDPSTNIYCISEALIKSCQGNTTDGLIFSGTNAYRTNKLTSVKDLMTSLVQEAELAY
CCCCCCEEEHHHHHHHHHCCCCCCCEEEECCCCHHCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLPSLKIGELIAKVPIIQGGMGVGVSLSRLASAVANHGGIGVISGVQIGYSEPDFSTNP
CCCCCHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCCEEEEECEEECCCCCCCCCCC
DQANLRALTKQIRKAKDLSPSGIIGVNLLAAINNYEDMVKTAVKENIDVIVTGAGLPKNL
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
PGLVEDAKTKLAPIVSSGKAASLICKLWDKRYNRVPDIVIVEGPLAGGHLGFKKQQLNSP
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHCCCC
DCSTLEKLIPETQEALHPFAKKYERTIPVVAAGGIFNGQDIAKFLKMGAQGVQMGTRFVT
CHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCHHHHCCEEEE
TEECDVHENFKKAYINSREQDIQLVDSPVGMPGRAISNNFTKQIETKRIPVSKCNNCLKP
CCCCCHHHHHHHHHHCCCHHHHHEECCCCCCCCHHHHCHHHHHHHHCCCCHHHHHCCCCC
CDPSTNIYCISEALIKSCQGNTTDGLIFSGTNAYRTNKLTSVKDLMTSLVQEAELAY
CCCCCCEEEHHHHHHHHHCCCCCCCEEEECCCCHHCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]