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The map label for this gene is opuAC [H]

Identifier: 188585717

GI number: 188585717

Start: 1151722

End: 1152600

Strand: Reverse

Name: opuAC [H]

Synonym: Nther_1090

Alternate gene names: 188585717

Gene position: 1152600-1151722 (Counterclockwise)

Preceding gene: 188585725

Following gene: 188585716

Centisome position: 36.41

GC content: 40.5

Gene sequence:

>879_bases
ATGTCAAGAACTGCAATCATTTTAGTAGTAGCTGCAGCTGTTATTGGGGCCTTCTTCATCTTTACCAATGATTTTGGAGA
TAACGGAGAGGCAGAAGATACGATAGAATTCGGGTTTGTAAACTGGGCTTGTTCGGTTGCTAAAACTCATACTATCTCAG
CTGTGTTAGAAAATGAAATGAATTATGACACTCAATTAACCATGGCCGATGCGGGACCAGTCTACGCAGATGTGGCCGCA
GGAGATCAAGATGCTTTTGTTTCAGCTTGGCTCCCTGTTACCCATCAAAGTTATTACGAAGATTACGGTGATGATATAGT
AGATCTCGGCCCAGTATACGAAGGAGCGAGAATCGGACTCGTTGTACCAGAATATCTTGAAGAAATAGATAGTATAGAAG
AAATGGACGAATACGAAGAAGAATTTGATACTGAAATAGTAGGAATTGATGCAGGGGCAGGGATAATGGGATCAACAGAT
GAAGCACTAGAAACTTATGAAAGCCTGGAGAATTACACCCTTACTGAGAGTTCCGACGCAGCAATGACAGGAGAACTAGG
TACTGCTATAAACAATGAAGAATGGATTGTCGTTACTGGTTGGACCCCCCACTGGAAATTTGCTGAATGGGATCTTAAAT
TTTTAGAGGATCCAGAACAAGTTTACGGGGAAGCCGAAGATATTCATGTGATGGTAAGAGAAAATTTTGATGATGACCAA
CCAGATGTCAATCAACTACTAGAAAACTTTTATCTAGAAGAGGAAGAATTGGGAGAAATTATGGCTATGATTGATGAAAT
GGATGATGAACAAGAAGCCGCAGAACAATGGATTGATGAAAACCAAGATATAGTTGAGGAGTGGCTACCTGAAGAATAA

Upstream 100 bases:

>100_bases
TTTTTTGCTTCACTGTCAAGTAGTTTGTATAAAGAAATTTCCCTTTTGGTTAAACTATAAAGGAGCTATAAACCTTAAAA
ACCACAATGGAGGGATACAT

Downstream 100 bases:

>100_bases
AAAATCATTGACTAATCATTCTCACCTCTTTATAATGTAAAAGAATGGCCTTTAAGCTAGTCCCGAGAGACTAGTAAGGG
AACCAGATAATTGTTACTTA

Product: Substrate-binding region of ABC-type glycine betaine transport system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MSRTAIILVVAAAVIGAFFIFTNDFGDNGEAEDTIEFGFVNWACSVAKTHTISAVLENEMNYDTQLTMADAGPVYADVAA
GDQDAFVSAWLPVTHQSYYEDYGDDIVDLGPVYEGARIGLVVPEYLEEIDSIEEMDEYEEEFDTEIVGIDAGAGIMGSTD
EALETYESLENYTLTESSDAAMTGELGTAINNEEWIVVTGWTPHWKFAEWDLKFLEDPEQVYGEAEDIHVMVRENFDDDQ
PDVNQLLENFYLEEEELGEIMAMIDEMDDEQEAAEQWIDENQDIVEEWLPEE

Sequences:

>Translated_292_residues
MSRTAIILVVAAAVIGAFFIFTNDFGDNGEAEDTIEFGFVNWACSVAKTHTISAVLENEMNYDTQLTMADAGPVYADVAA
GDQDAFVSAWLPVTHQSYYEDYGDDIVDLGPVYEGARIGLVVPEYLEEIDSIEEMDEYEEEFDTEIVGIDAGAGIMGSTD
EALETYESLENYTLTESSDAAMTGELGTAINNEEWIVVTGWTPHWKFAEWDLKFLEDPEQVYGEAEDIHVMVRENFDDDQ
PDVNQLLENFYLEEEELGEIMAMIDEMDDEQEAAEQWIDENQDIVEEWLPEE
>Mature_291_residues
SRTAIILVVAAAVIGAFFIFTNDFGDNGEAEDTIEFGFVNWACSVAKTHTISAVLENEMNYDTQLTMADAGPVYADVAAG
DQDAFVSAWLPVTHQSYYEDYGDDIVDLGPVYEGARIGLVVPEYLEEIDSIEEMDEYEEEFDTEIVGIDAGAGIMGSTDE
ALETYESLENYTLTESSDAAMTGELGTAINNEEWIVVTGWTPHWKFAEWDLKFLEDPEQVYGEAEDIHVMVRENFDDDQP
DVNQLLENFYLEEEELGEIMAMIDEMDDEQEAAEQWIDENQDIVEEWLPEE

Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine [H]

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 32885; Mature: 32754

Theoretical pI: Translated: 3.23; Mature: 3.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTAIILVVAAAVIGAFFIFTNDFGDNGEAEDTIEFGFVNWACSVAKTHTISAVLENEM
CCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCC
NYDTQLTMADAGPVYADVAAGDQDAFVSAWLPVTHQSYYEDYGDDIVDLGPVYEGARIGL
CCCEEEEEECCCCEEEEECCCCCCCEEEECCCHHHHHHHHHHCCCCEECCCCCCCCEEEE
VVPEYLEEIDSIEEMDEYEEEFDTEIVGIDAGAGIMGSTDEALETYESLENYTLTESSDA
ECHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHCCEECCCCCC
AMTGELGTAINNEEWIVVTGWTPHWKFAEWDLKFLEDPEQVYGEAEDIHVMVRENFDDDQ
EECCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHCCCHHHHCCCCHHEEEEEECCCCCCC
PDVNQLLENFYLEEEELGEIMAMIDEMDDEQEAAEQWIDENQDIVEEWLPEE
CHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCC
>Mature Secondary Structure 
SRTAIILVVAAAVIGAFFIFTNDFGDNGEAEDTIEFGFVNWACSVAKTHTISAVLENEM
CCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCC
NYDTQLTMADAGPVYADVAAGDQDAFVSAWLPVTHQSYYEDYGDDIVDLGPVYEGARIGL
CCCEEEEEECCCCEEEEECCCCCCCEEEECCCHHHHHHHHHHCCCCEECCCCCCCCEEEE
VVPEYLEEIDSIEEMDEYEEEFDTEIVGIDAGAGIMGSTDEALETYESLENYTLTESSDA
ECHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHCCEECCCCCC
AMTGELGTAINNEEWIVVTGWTPHWKFAEWDLKFLEDPEQVYGEAEDIHVMVRENFDDDQ
EECCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHCCCHHHHCCCCHHEEEEEECCCCCCC
PDVNQLLENFYLEEEELGEIMAMIDEMDDEQEAAEQWIDENQDIVEEWLPEE
CHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622480; 8969502; 9384377 [H]