| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
Click here to switch to the map view.
The map label for this gene is cbiH [H]
Identifier: 188585563
GI number: 188585563
Start: 993168
End: 993884
Strand: Direct
Name: cbiH [H]
Synonym: Nther_0935
Alternate gene names: 188585563
Gene position: 993168-993884 (Clockwise)
Preceding gene: 188585562
Following gene: 188585564
Centisome position: 31.37
GC content: 39.75
Gene sequence:
>717_bases GTGGCCGTGGTGGGTATTGGACCCGGTGGTGGAAAGAGCCTATCAATAGAAGCTAAACAAATATTGCTAAACTCGGAAGT CATTATTGGGTATAAGACTTATATTCAACTGATAGAGGACTTAATTACAGAACAACAGGTAATTTCTTCTTCCATGAAGC AAGAATTAGACAGATGTCAAGAGGCTCTTAAATTAGCTAAAGAAGGGAAACAAGTAGCCATAGTAAGCAGTGGAGACCCT GGAGTTTACGGAATGGCAGGGGTTGTATTGGAATTAAATGAAGACCCAGATCTTCCTGTTGAAATTGTTCCGGGAACAAC AGCCGCTACGGGTGCTGCTTCTTCTTTAGGTGCACCTTTAATGCATGATTTTACAGTTATTAGCCTCAGCGATCTATTGA CTCCCTGGCAGCAGATCATAAAAAAATTAAAGGCTGTGGCTAGTACTGACTTTGTAGTAGTACTTTATAATCCGAAAAGC AGTCAACGGAGAGAACAAATTGAAATTGCCCGGGAAATATTTCTGGAATATCGCAGCCCCCAAACCCCTGTTGGATTAGT TTCTAACAATTACAGACAAGGGGAAAAGACTGTTATTACAACACTGGAGGAATTCACAAACTGTGATATTGATATGAGTA CAACTGTCGTAATTGGTAATGACCAAAGTTATGTTAAATTCGAAAAGATGATTACTCCAAGGGGTTATCAATTATGA
Upstream 100 bases:
>100_bases GAATATGCGAACCAGCAGCCAGGACTCTAGCAGGTACAGAGGAACTTTTGATGAAGAAACTGACTCACAAAGGTGTAACT GTAGCACTGGCCAGGGCAAA
Downstream 100 bases:
>100_bases TCTTAGTTTTGGGTGGAACCGATGATGGAATTAAAGTTGGCGAATTTTTAACTAAACAAGGTCATTCTGTTATGGTCAGT GCCAGTACAGATTATGGTAA
Product: precorrin-3 methyltransferase
Products: S-adenosyl-L-homocysteine; Precorrin 4
Alternate protein names: Cobalt-precorrin-3 methylase; Cobalt-precorrin-3 methyltransferase [H]
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MAVVGIGPGGGKSLSIEAKQILLNSEVIIGYKTYIQLIEDLITEQQVISSSMKQELDRCQEALKLAKEGKQVAIVSSGDP GVYGMAGVVLELNEDPDLPVEIVPGTTAATGAASSLGAPLMHDFTVISLSDLLTPWQQIIKKLKAVASTDFVVVLYNPKS SQRREQIEIAREIFLEYRSPQTPVGLVSNNYRQGEKTVITTLEEFTNCDIDMSTTVVIGNDQSYVKFEKMITPRGYQL
Sequences:
>Translated_238_residues MAVVGIGPGGGKSLSIEAKQILLNSEVIIGYKTYIQLIEDLITEQQVISSSMKQELDRCQEALKLAKEGKQVAIVSSGDP GVYGMAGVVLELNEDPDLPVEIVPGTTAATGAASSLGAPLMHDFTVISLSDLLTPWQQIIKKLKAVASTDFVVVLYNPKS SQRREQIEIAREIFLEYRSPQTPVGLVSNNYRQGEKTVITTLEEFTNCDIDMSTTVVIGNDQSYVKFEKMITPRGYQL >Mature_237_residues AVVGIGPGGGKSLSIEAKQILLNSEVIIGYKTYIQLIEDLITEQQVISSSMKQELDRCQEALKLAKEGKQVAIVSSGDPG VYGMAGVVLELNEDPDLPVEIVPGTTAATGAASSLGAPLMHDFTVISLSDLLTPWQQIIKKLKAVASTDFVVVLYNPKSS QRREQIEIAREIFLEYRSPQTPVGLVSNNYRQGEKTVITTLEEFTNCDIDMSTTVVIGNDQSYVKFEKMITPRGYQL
Specific function: Methyltransferase that catalyzes the methylation of C-17 in cobalt-precorrin-3B to form cobalt-precorrin-4 [H]
COG id: COG1010
COG function: function code H; Precorrin-3B methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR014776 - InterPro: IPR006363 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: 2.1.1.131
Molecular weight: Translated: 25984; Mature: 25853
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVVGIGPGGGKSLSIEAKQILLNSEVIIGYKTYIQLIEDLITEQQVISSSMKQELDRCQ CEEEEECCCCCCEEEEEHHHEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EALKLAKEGKQVAIVSSGDPGVYGMAGVVLELNEDPDLPVEIVPGTTAATGAASSLGAPL HHHHHHHCCCEEEEEECCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCCCHHHCCCCH MHDFTVISLSDLLTPWQQIIKKLKAVASTDFVVVLYNPKSSQRREQIEIAREIFLEYRSP HHHHHEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCC QTPVGLVSNNYRQGEKTVITTLEEFTNCDIDMSTTVVIGNDQSYVKFEKMITPRGYQL CCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEHEEHCCCCCCCC >Mature Secondary Structure AVVGIGPGGGKSLSIEAKQILLNSEVIIGYKTYIQLIEDLITEQQVISSSMKQELDRCQ EEEEECCCCCCEEEEEHHHEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EALKLAKEGKQVAIVSSGDPGVYGMAGVVLELNEDPDLPVEIVPGTTAATGAASSLGAPL HHHHHHHCCCEEEEEECCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCCCHHHCCCCH MHDFTVISLSDLLTPWQQIIKKLKAVASTDFVVVLYNPKSSQRREQIEIAREIFLEYRSP HHHHHEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCC QTPVGLVSNNYRQGEKTVITTLEEFTNCDIDMSTTVVIGNDQSYVKFEKMITPRGYQL CCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEHEEHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-adenosyl-L-methionine; Precorrin 3B
Specific reaction: S-adenosyl-L-methionine + precorrin-3B = S-adenosyl-L-homocysteine + precorrin-4
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501034; 11677609 [H]