| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188585548
Identifier: 188585548
GI number: 188585548
Start: 975174
End: 976394
Strand: Direct
Name: 188585548
Synonym: Nther_0920
Alternate gene names: NA
Gene position: 975174-976394 (Clockwise)
Preceding gene: 188585546
Following gene: 188585554
Centisome position: 30.81
GC content: 32.68
Gene sequence:
>1221_bases GTGAAAAAATCATGTTTCAAACTACTAGTTATCAGTACGATGTTCATTTTTGCTTTTTTTGGAACTGCTGGTCATAATGT AATTGCACAAGAAGATGTATTTGTAAAGAGTGACTTGATGTTAAAAATTAATGGTGAACAAGTTGAAGCAGAAATGTTTA TTGAAGAAGGTAGGGTACAGATTGAAGCTGAAGCAGTAAACGAACTTTTTAATGGCGACTTTGAAGAAAAATTCATCTCG TTAAGAGAAGTTTTTGAGACTGCAAGAGCTAAGGTCGACTGGAATGGTCAAGAAAGGATTATAAACATCACATTGGCAGA AATTGACAGTGAAGGTATGTCAAACATAGAGTTAAATAGTGATGAAATTGTGATATTGGCAGAAGAATATATTTTGGAGA AAAACACATACAAAATGAGTGGTAATGGCATTTCATCCTTTGAAATGGAGCTTCCGGATATGCCAGTTTTTCCAGTATTA GAATTTCCAATAAACATTGAAGCTGATTTGCAATATGATCCTTTTAAACTATACATTAAACAAAGTATGGATATCCCACA GGAAATGTTGATTGAACTGGATAACGAGGGCTCTAGTTTTGATACTGTAACAAATACTGAAATGTTAATTTTAGAAGATA AATTTTACCAAAATTATCCCGAGGATCAATGGATAGTCATGTCCTTTGAAGATTTGGGGATGGATGAAATGTTACAGTAT TTAACTAACATGGATCCTAGGGAAACTATTGAACTTGGCAAACAATATGGAATTGAATATGATTTGATTGATGAATTAAC TTTTAATGGAGAAGACTGTTATGTCATTAGGGTTGAGCTAGAAACAGATACACTTGTAAGTTTCATAAAGGATATTTTCG GCGAAAGTCAGTTAACTTTAATTGATGAAGGTGATTTAACCAAGGAAGAATTAGAAATCATGAATGAGCAGATGTTAAAT TTATTGGACAGTATAGAAATGGCCATAGTGCAGGATATGGTAATAAACAAAGAAACTTATGAAACTCACCAAATAATCTC AGAAATGGACTACACCTTTGAGATAAATGAAGTAATTGAAGGAGAAGACTTTAGCGGGAAAGTAAAAACATCATCTTTTA TGACTCTAGAACTATTTGATTACGGAGTAGAACTAGACTTTCCAGAAATTGCTGATGCCATTACTTTAGAAGAATTTACT GAAGTCTTGCTTAATGAGTAA
Upstream 100 bases:
>100_bases AACTCATGTTGTGAAAATTAAAAAAATAGATTGACAAAACTTGCAAAAAGAGGTAAAGTAATTTTAATACAACTAAATAT GGGAGAGGAGACAAAAATTA
Downstream 100 bases:
>100_bases TAACTTAACTTAAAAAGAGGAGCTGCACTTAAGTATATACATTACTTTCGGTGCAGCTCCTTTTAATTTTGTGTGTAGTA GTCTAATCTTTTTAGAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MKKSCFKLLVISTMFIFAFFGTAGHNVIAQEDVFVKSDLMLKINGEQVEAEMFIEEGRVQIEAEAVNELFNGDFEEKFIS LREVFETARAKVDWNGQERIINITLAEIDSEGMSNIELNSDEIVILAEEYILEKNTYKMSGNGISSFEMELPDMPVFPVL EFPINIEADLQYDPFKLYIKQSMDIPQEMLIELDNEGSSFDTVTNTEMLILEDKFYQNYPEDQWIVMSFEDLGMDEMLQY LTNMDPRETIELGKQYGIEYDLIDELTFNGEDCYVIRVELETDTLVSFIKDIFGESQLTLIDEGDLTKEELEIMNEQMLN LLDSIEMAIVQDMVINKETYETHQIISEMDYTFEINEVIEGEDFSGKVKTSSFMTLELFDYGVELDFPEIADAITLEEFT EVLLNE
Sequences:
>Translated_406_residues MKKSCFKLLVISTMFIFAFFGTAGHNVIAQEDVFVKSDLMLKINGEQVEAEMFIEEGRVQIEAEAVNELFNGDFEEKFIS LREVFETARAKVDWNGQERIINITLAEIDSEGMSNIELNSDEIVILAEEYILEKNTYKMSGNGISSFEMELPDMPVFPVL EFPINIEADLQYDPFKLYIKQSMDIPQEMLIELDNEGSSFDTVTNTEMLILEDKFYQNYPEDQWIVMSFEDLGMDEMLQY LTNMDPRETIELGKQYGIEYDLIDELTFNGEDCYVIRVELETDTLVSFIKDIFGESQLTLIDEGDLTKEELEIMNEQMLN LLDSIEMAIVQDMVINKETYETHQIISEMDYTFEINEVIEGEDFSGKVKTSSFMTLELFDYGVELDFPEIADAITLEEFT EVLLNE >Mature_406_residues MKKSCFKLLVISTMFIFAFFGTAGHNVIAQEDVFVKSDLMLKINGEQVEAEMFIEEGRVQIEAEAVNELFNGDFEEKFIS LREVFETARAKVDWNGQERIINITLAEIDSEGMSNIELNSDEIVILAEEYILEKNTYKMSGNGISSFEMELPDMPVFPVL EFPINIEADLQYDPFKLYIKQSMDIPQEMLIELDNEGSSFDTVTNTEMLILEDKFYQNYPEDQWIVMSFEDLGMDEMLQY LTNMDPRETIELGKQYGIEYDLIDELTFNGEDCYVIRVELETDTLVSFIKDIFGESQLTLIDEGDLTKEELEIMNEQMLN LLDSIEMAIVQDMVINKETYETHQIISEMDYTFEINEVIEGEDFSGKVKTSSFMTLELFDYGVELDFPEIADAITLEEFT EVLLNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46954; Mature: 46954
Theoretical pI: Translated: 3.63; Mature: 3.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSCFKLLVISTMFIFAFFGTAGHNVIAQEDVFVKSDLMLKINGEQVEAEMFIEEGRVQ CCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEECCEEEEECCCEEEEHHHHCCCCEE IEAEAVNELFNGDFEEKFISLREVFETARAKVDWNGQERIINITLAEIDSEGMSNIELNS EEHHHHHHHHCCCHHHHHHHHHHHHHHHHCEECCCCCCEEEEEEEEECCCCCCCCEEECC DEIVILAEEYILEKNTYKMSGNGISSFEMELPDMPVFPVLEFPINIEADLQYDPFKLYIK CCEEEEEHHHHCCCCCEEECCCCCCEEEEECCCCCCCEEEECCCCEEECCCCCCEEEEEE QSMDIPQEMLIELDNEGSSFDTVTNTEMLILEDKFYQNYPEDQWIVMSFEDLGMDEMLQY CCCCCCHHHHEEECCCCCCCCEECCCEEEEEECHHHCCCCCCCEEEEEHHHCCHHHHHHH LTNMDPRETIELGKQYGIEYDLIDELTFNGEDCYVIRVELETDTLVSFIKDIFGESQLTL HHCCCHHHHHHHHHHHCCCEEEEHHEEECCCCEEEEEEEECHHHHHHHHHHHHCCCEEEE IDEGDLTKEELEIMNEQMLNLLDSIEMAIVQDMVINKETYETHQIISEMDYTFEINEVIE EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECHHCC GEDFSGKVKTSSFMTLELFDYGVELDFPEIADAITLEEFTEVLLNE CCCCCCEEECCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKSCFKLLVISTMFIFAFFGTAGHNVIAQEDVFVKSDLMLKINGEQVEAEMFIEEGRVQ CCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEECCEEEEECCCEEEEHHHHCCCCEE IEAEAVNELFNGDFEEKFISLREVFETARAKVDWNGQERIINITLAEIDSEGMSNIELNS EEHHHHHHHHCCCHHHHHHHHHHHHHHHHCEECCCCCCEEEEEEEEECCCCCCCCEEECC DEIVILAEEYILEKNTYKMSGNGISSFEMELPDMPVFPVLEFPINIEADLQYDPFKLYIK CCEEEEEHHHHCCCCCEEECCCCCCEEEEECCCCCCCEEEECCCCEEECCCCCCEEEEEE QSMDIPQEMLIELDNEGSSFDTVTNTEMLILEDKFYQNYPEDQWIVMSFEDLGMDEMLQY CCCCCCHHHHEEECCCCCCCCEECCCEEEEEECHHHCCCCCCCEEEEEHHHCCHHHHHHH LTNMDPRETIELGKQYGIEYDLIDELTFNGEDCYVIRVELETDTLVSFIKDIFGESQLTL HHCCCHHHHHHHHHHHCCCEEEEHHEEECCCCEEEEEEEECHHHHHHHHHHHHCCCEEEE IDEGDLTKEELEIMNEQMLNLLDSIEMAIVQDMVINKETYETHQIISEMDYTFEINEVIE EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECHHCC GEDFSGKVKTSSFMTLELFDYGVELDFPEIADAITLEEFTEVLLNE CCCCCCEEECCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA