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The map label for this gene is yojE [H]

Identifier: 188585494

GI number: 188585494

Start: 913161

End: 914090

Strand: Direct

Name: yojE [H]

Synonym: Nther_0866

Alternate gene names: 188585494

Gene position: 913161-914090 (Clockwise)

Preceding gene: 188585493

Following gene: 188585495

Centisome position: 28.85

GC content: 38.17

Gene sequence:

>930_bases
ATGGGGGCCAATGAAGCTAAAAAAGGGGTTTTTCTAGGATTATCAGCTTATATTCTCTGGGGATTACTCCCTCTTTACTG
GGATTTATTAGACCAAGTGCCGGCTGAACAAGTTCTTGCTCACCGAATATTTTGGTCTTGCTTTTTTGTTGGATTTATTG
TGTGTATTAATAAAAACTGGAGAATGGTAGGAAATATTTTTAAAAGTAGAAGGAATTTGGCCATAACTTTGTTGGCCGCT
GTTGTTATCAGTGCGAACTGGTTCACTTACATTTGGGGAGTTCAGGCCAATAGGGTAGTAGAAGCTAGTATGGGATATTA
TATAAATCCTTTAGTAGCTGTGATGTTAGGTGTATTGGTATTAAAGGAAAAATTGAGTACCACTAAGAAAATATCAGTTG
CCATTGCCACCCTAGGTGTATTAGTGATGACATTCAGTTATGGACAATTTCCTTGGGTCGCATTAGTGCTGGCATTTACT
TTTGCGTTTTACGGATTAATAAAAAAGACTATCCCTGTCGATCCTATACCGGGGTTGTTTTTGGAAACAGCTATTTTAGC
ACCAATTGTTTTAGCATACTTAACTTTTCATGAAGTTCAAGGGACGGGAGCCCTAGGGGACGCTCCTTTACATCTGATTT
TATTGTTAATGGGAGCAGGGGTGGCCACATCAACACCGCTACTTTTATTTTCCATGGCGGCAAGGAAAGTAAAATTGTCA
ACTGTAGGGTTTATGCAGTACATTTCTCCTACCCTTAGCTTGTATTTAGGGGTATTTATTTTTAATGAACCCTTCACATC
AATTCATTTATTTACTTTTGGCTGCATTTGGATTGCCCTAGCCTTATATACCTGGGATAGTGTTAAAACCTATAGAGAAA
GTCGGAATATGAAAGCAGAAGCTGTATCTTCTACATCAAATTATGATTAG

Upstream 100 bases:

>100_bases
TTTATTAGTTAAAGTGAAGTTTAGACTTGCTAAATATAAAATAACTTCTATATAATAGTTATAGTGTTTAACTAAATTTG
GTGTAAAAGAGGTGTGAGTT

Downstream 100 bases:

>100_bases
TCGATTAGTCTGAAAAAAGGAGCGGAGTAATTATGGCACAAGGCGTTATTTTTTCTATTTTAGCAGGGATATTTGTAACA
GTACAGGGAGTTTTTAATGC

Product: RarD protein, DMT superfamily transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MGANEAKKGVFLGLSAYILWGLLPLYWDLLDQVPAEQVLAHRIFWSCFFVGFIVCINKNWRMVGNIFKSRRNLAITLLAA
VVISANWFTYIWGVQANRVVEASMGYYINPLVAVMLGVLVLKEKLSTTKKISVAIATLGVLVMTFSYGQFPWVALVLAFT
FAFYGLIKKTIPVDPIPGLFLETAILAPIVLAYLTFHEVQGTGALGDAPLHLILLLMGAGVATSTPLLLFSMAARKVKLS
TVGFMQYISPTLSLYLGVFIFNEPFTSIHLFTFGCIWIALALYTWDSVKTYRESRNMKAEAVSSTSNYD

Sequences:

>Translated_309_residues
MGANEAKKGVFLGLSAYILWGLLPLYWDLLDQVPAEQVLAHRIFWSCFFVGFIVCINKNWRMVGNIFKSRRNLAITLLAA
VVISANWFTYIWGVQANRVVEASMGYYINPLVAVMLGVLVLKEKLSTTKKISVAIATLGVLVMTFSYGQFPWVALVLAFT
FAFYGLIKKTIPVDPIPGLFLETAILAPIVLAYLTFHEVQGTGALGDAPLHLILLLMGAGVATSTPLLLFSMAARKVKLS
TVGFMQYISPTLSLYLGVFIFNEPFTSIHLFTFGCIWIALALYTWDSVKTYRESRNMKAEAVSSTSNYD
>Mature_308_residues
GANEAKKGVFLGLSAYILWGLLPLYWDLLDQVPAEQVLAHRIFWSCFFVGFIVCINKNWRMVGNIFKSRRNLAITLLAAV
VISANWFTYIWGVQANRVVEASMGYYINPLVAVMLGVLVLKEKLSTTKKISVAIATLGVLVMTFSYGQFPWVALVLAFTF
AFYGLIKKTIPVDPIPGLFLETAILAPIVLAYLTFHEVQGTGALGDAPLHLILLLMGAGVATSTPLLLFSMAARKVKLST
VGFMQYISPTLSLYLGVFIFNEPFTSIHLFTFGCIWIALALYTWDSVKTYRESRNMKAEAVSSTSNYD

Specific function: Unknown

COG id: COG2962

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI48994976, Length=296, Percent_Identity=39.1891891891892, Blast_Score=235, Evalue=2e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620
- InterPro:   IPR004626 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34268; Mature: 34137

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGANEAKKGVFLGLSAYILWGLLPLYWDLLDQVPAEQVLAHRIFWSCFFVGFIVCINKNW
CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCH
RMVGNIFKSRRNLAITLLAAVVISANWFTYIWGVQANRVVEASMGYYINPLVAVMLGVLV
HHHHHHHHHCCCHHHHHHHHHHHHCCHHHEEECCCCCHHHHHHCCCHHHHHHHHHHHHHH
LKEKLSTTKKISVAIATLGVLVMTFSYGQFPWVALVLAFTFAFYGLIKKTIPVDPIPGLF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LETAILAPIVLAYLTFHEVQGTGALGDAPLHLILLLMGAGVATSTPLLLFSMAARKVKLS
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
TVGFMQYISPTLSLYLGVFIFNEPFTSIHLFTFGCIWIALALYTWDSVKTYRESRNMKAE
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AVSSTSNYD
HHCCCCCCC
>Mature Secondary Structure 
GANEAKKGVFLGLSAYILWGLLPLYWDLLDQVPAEQVLAHRIFWSCFFVGFIVCINKNW
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCH
RMVGNIFKSRRNLAITLLAAVVISANWFTYIWGVQANRVVEASMGYYINPLVAVMLGVLV
HHHHHHHHHCCCHHHHHHHHHHHHCCHHHEEECCCCCHHHHHHCCCHHHHHHHHHHHHHH
LKEKLSTTKKISVAIATLGVLVMTFSYGQFPWVALVLAFTFAFYGLIKKTIPVDPIPGLF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LETAILAPIVLAYLTFHEVQGTGALGDAPLHLILLLMGAGVATSTPLLLFSMAARKVKLS
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
TVGFMQYISPTLSLYLGVFIFNEPFTSIHLFTFGCIWIALALYTWDSVKTYRESRNMKAE
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AVSSTSNYD
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]