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The map label for this gene is cooS [H]

Identifier: 188585488

GI number: 188585488

Start: 904545

End: 906632

Strand: Reverse

Name: cooS [H]

Synonym: Nther_0860

Alternate gene names: 188585488

Gene position: 906632-904545 (Counterclockwise)

Preceding gene: 188585489

Following gene: 188585483

Centisome position: 28.64

GC content: 41.95

Gene sequence:

>2088_bases
ATGATATTTAGAAGAGGTAAAGTTTCAAACAAAGAAAAACACAATGATTTAGGCGGAACCAATGATCCTAAAGATCACGA
GGATTTACACGCTCAAATCAAAGTCGATTATCAGAGTATTGATAAATCACCCCAGGGGAAACAACTACATGACTGGCAGA
GAGAGCATATCAAAGGGGCAGATCAATCAAAAGAAGGCTATCCCATGAATGTAATTTTAGATCCAGCAATGCGGGAGATG
TATCAGGTTGTTAATAAATCAAAAATGACCAATGTCTTTGATCGTTTTTCAGAACAACAGCCCCAATGTAAGTTCTGTAT
TGAAGGATTATCCTGCCAACTTTGCGCCAATGGCCCATGTAGAATATCAGAGCGGGCTCCCAGGGGTGTATGTGGTGTAG
ACGCACATACCATGGTTGCAAGAAACTTTAACTACCGTCATGTCACCATCGGGACATCTGCTAATATTTTCCACGCCCAC
CAGGCAGCTAGGACTTTAAAGGCTGCTGCTACAAATCCTGAAAGTGGCCTAAAAATACGAGATCAAGACAAACTAAAGTT
TTTTGCAGGAATGTTAGGTATTAATACCGATGCCGATATCAATCAGATTGCTATAGATTTTGCAGACACTGTAATTGACG
ATATTCACGGACCGTATCATATAGAATCAAAACTTGTTAACGCCTTTGCTCCGGAAAAAAGGAAAAACCTATGGAGAGAC
TTGGGAATTTTCCCTGGCGGAGGTTACAGTGAGGTCGCTTATGCCCAAACTATGAGCATGACAAACTTTACTTCAGATCC
AGTAGCATTCTTGCTTAATGGAGTCAGGATGGGAATTGCCAATGAATATCAAGGCCTATTTGCTCTAGATATTTTACAAG
AAATTTTAATTGGCAGTCAGAAAATAACTGAACAAGAACAGAATATGGGACTTTTAAAAGAAAACCAGGTCAATATCATA
ACAAACGGTCATATGCCATTACTGGCCCATGTTGCCATTGAAAAAGCGTCATCGGAAGAATGGCAGCAAAAGGCAAAAGA
AGCCGGTGCAGAAGGTATCCAAGTATTAGGTCATGTTTGCGAAGGACAACAGTTATTGAACTATGAAGGTTCTCAAAACA
TGAGTGCATATACAGGTCAAGAAGGTGAATGGCTCTCAGAAGAATATGTACTCGCTACAGGAGTAGTTGACCTGTTCATG
TTCGACTACAATTGCACAGTACCTACATTACCTCTTTATGCAGAACGCTTTGGTACTAAACTCGTCAGCACACACCCGGT
GATCAAGTTACAAGGTACCGAAACTATTGACTTCGTTCCCGAAAAAATGAATGAACAGGCTGATAAAGTCTTAGATATGG
CTATCGATGCCTTTAAAACTCGCAAACAAGATCAGAGAGAAACTTATATACCACCTCACACTTCCAAATGTACCGTAGGT
TTTAGTACAGAATCAGTATTAGAGGCCTTGGGAGGTTCCTTACAACCTCTGATCGACCAGATCACCAATGGAAACATCAG
AGGTATTGCAACAGTCGTAGGTTGTACTACTGCCCAGTACGGTCAAGGTGGAAGTAACGTTTTTAAAATCACTAAAGGTT
TAATTGAGAACAACATACTGGTTCTTTCAGGTGGATGTACCTCCTCTGTCATGGAATACACTAACTTAACTAATCCAGAA
GCTGCTGAAGATGCCGGAGACGGCTTGAAAGCCGTATGTCAACAGCTTGGCATACCTCCAGTTCTATCTTACGGGGCATG
TGTCGATATTGGCAAAATGACGCATACTGCTGTAGCCTTAGCCGATGAACTAGGTGTTGATACCAATCAATTACCTCTAG
TCATTGGAGCGCCTGAATATCTAGAGCAAAAAGCGGTAGCCGATGCATGTACTGCCGTGGCACTAGGTTGGCTAGTCCAC
GTAGCTCCCGTCCCTTCAGTCACCGGCAGTGAAACTGTGGTAGAGACTCTGACTAAAACTACTGAAGAGATGGGACTAGG
AAAACTCATGGTAGAAATGGACGCTGATAGAGCAGTCAAGACCTATGTCGACCATATTGAAACCAAACGAAAAGAACTGG
GAATTTAG

Upstream 100 bases:

>100_bases
GTATAACAAATTTTATAAGACAAACCCTAATAAGAGACCACGACAACTATAGGTTCATTCACTATCATTAAGGGGGGATC
ATCAAGGGGGGATCATCGTA

Downstream 100 bases:

>100_bases
TTTCTTATCGTGAGTTTTTAAGTTAACGTTTAAAGTCATAAATTTTAAGCTGTACGTCGTATATTTAAAAGTCAGTAGGT
AGTTTTCAAAACCCTACTGA

Product: carbon-monoxide dehydrogenase, catalytic subunit

Products: NA

Alternate protein names: CODH [H]

Number of amino acids: Translated: 695; Mature: 695

Protein sequence:

>695_residues
MIFRRGKVSNKEKHNDLGGTNDPKDHEDLHAQIKVDYQSIDKSPQGKQLHDWQREHIKGADQSKEGYPMNVILDPAMREM
YQVVNKSKMTNVFDRFSEQQPQCKFCIEGLSCQLCANGPCRISERAPRGVCGVDAHTMVARNFNYRHVTIGTSANIFHAH
QAARTLKAAATNPESGLKIRDQDKLKFFAGMLGINTDADINQIAIDFADTVIDDIHGPYHIESKLVNAFAPEKRKNLWRD
LGIFPGGGYSEVAYAQTMSMTNFTSDPVAFLLNGVRMGIANEYQGLFALDILQEILIGSQKITEQEQNMGLLKENQVNII
TNGHMPLLAHVAIEKASSEEWQQKAKEAGAEGIQVLGHVCEGQQLLNYEGSQNMSAYTGQEGEWLSEEYVLATGVVDLFM
FDYNCTVPTLPLYAERFGTKLVSTHPVIKLQGTETIDFVPEKMNEQADKVLDMAIDAFKTRKQDQRETYIPPHTSKCTVG
FSTESVLEALGGSLQPLIDQITNGNIRGIATVVGCTTAQYGQGGSNVFKITKGLIENNILVLSGGCTSSVMEYTNLTNPE
AAEDAGDGLKAVCQQLGIPPVLSYGACVDIGKMTHTAVALADELGVDTNQLPLVIGAPEYLEQKAVADACTAVALGWLVH
VAPVPSVTGSETVVETLTKTTEEMGLGKLMVEMDADRAVKTYVDHIETKRKELGI

Sequences:

>Translated_695_residues
MIFRRGKVSNKEKHNDLGGTNDPKDHEDLHAQIKVDYQSIDKSPQGKQLHDWQREHIKGADQSKEGYPMNVILDPAMREM
YQVVNKSKMTNVFDRFSEQQPQCKFCIEGLSCQLCANGPCRISERAPRGVCGVDAHTMVARNFNYRHVTIGTSANIFHAH
QAARTLKAAATNPESGLKIRDQDKLKFFAGMLGINTDADINQIAIDFADTVIDDIHGPYHIESKLVNAFAPEKRKNLWRD
LGIFPGGGYSEVAYAQTMSMTNFTSDPVAFLLNGVRMGIANEYQGLFALDILQEILIGSQKITEQEQNMGLLKENQVNII
TNGHMPLLAHVAIEKASSEEWQQKAKEAGAEGIQVLGHVCEGQQLLNYEGSQNMSAYTGQEGEWLSEEYVLATGVVDLFM
FDYNCTVPTLPLYAERFGTKLVSTHPVIKLQGTETIDFVPEKMNEQADKVLDMAIDAFKTRKQDQRETYIPPHTSKCTVG
FSTESVLEALGGSLQPLIDQITNGNIRGIATVVGCTTAQYGQGGSNVFKITKGLIENNILVLSGGCTSSVMEYTNLTNPE
AAEDAGDGLKAVCQQLGIPPVLSYGACVDIGKMTHTAVALADELGVDTNQLPLVIGAPEYLEQKAVADACTAVALGWLVH
VAPVPSVTGSETVVETLTKTTEEMGLGKLMVEMDADRAVKTYVDHIETKRKELGI
>Mature_695_residues
MIFRRGKVSNKEKHNDLGGTNDPKDHEDLHAQIKVDYQSIDKSPQGKQLHDWQREHIKGADQSKEGYPMNVILDPAMREM
YQVVNKSKMTNVFDRFSEQQPQCKFCIEGLSCQLCANGPCRISERAPRGVCGVDAHTMVARNFNYRHVTIGTSANIFHAH
QAARTLKAAATNPESGLKIRDQDKLKFFAGMLGINTDADINQIAIDFADTVIDDIHGPYHIESKLVNAFAPEKRKNLWRD
LGIFPGGGYSEVAYAQTMSMTNFTSDPVAFLLNGVRMGIANEYQGLFALDILQEILIGSQKITEQEQNMGLLKENQVNII
TNGHMPLLAHVAIEKASSEEWQQKAKEAGAEGIQVLGHVCEGQQLLNYEGSQNMSAYTGQEGEWLSEEYVLATGVVDLFM
FDYNCTVPTLPLYAERFGTKLVSTHPVIKLQGTETIDFVPEKMNEQADKVLDMAIDAFKTRKQDQRETYIPPHTSKCTVG
FSTESVLEALGGSLQPLIDQITNGNIRGIATVVGCTTAQYGQGGSNVFKITKGLIENNILVLSGGCTSSVMEYTNLTNPE
AAEDAGDGLKAVCQQLGIPPVLSYGACVDIGKMTHTAVALADELGVDTNQLPLVIGAPEYLEQKAVADACTAVALGWLVH
VAPVPSVTGSETVVETLTKTTEEMGLGKLMVEMDADRAVKTYVDHIETKRKELGI

Specific function: Probable Enzyme Of Yet Uncharacterized Activity, The Protein Is Only Expressed During Anaerobic Cultivation With Nitrate Or Nitrite As Terminal Electron Acceptors. [C]

COG id: COG1151

COG function: function code C; 6Fe-6S prismane cluster-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Ni-containing carbon monoxide dehydrogenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016101
- InterPro:   IPR010047
- InterPro:   IPR004137
- InterPro:   IPR011254
- InterPro:   IPR016099 [H]

Pfam domain/function: PF03063 Prismane [H]

EC number: =1.2.99.2 [H]

Molecular weight: Translated: 76137; Mature: 76137

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFRRGKVSNKEKHNDLGGTNDPKDHEDLHAQIKVDYQSIDKSPQGKQLHDWQREHIKGA
CCCCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCHHHHHHHHHCCCC
DQSKEGYPMNVILDPAMREMYQVVNKSKMTNVFDRFSEQQPQCKFCIEGLSCQLCANGPC
CCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCC
RISERAPRGVCGVDAHTMVARNFNYRHVTIGTSANIFHAHQAARTLKAAATNPESGLKIR
CCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEC
DQDKLKFFAGMLGINTDADINQIAIDFADTVIDDIHGPYHIESKLVNAFAPEKRKNLWRD
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCHHHHHHHHH
LGIFPGGGYSEVAYAQTMSMTNFTSDPVAFLLNGVRMGIANEYQGLFALDILQEILIGSQ
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHCCH
KITEQEQNMGLLKENQVNIITNGHMPLLAHVAIEKASSEEWQQKAKEAGAEGIQVLGHVC
HHHHHHHCCCCEECCCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHH
EGQQLLNYEGSQNMSAYTGQEGEWLSEEYVLATGVVDLFMFDYNCTVPTLPLYAERFGTK
CCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCHHHHHHHCCH
LVSTHPVIKLQGTETIDFVPEKMNEQADKVLDMAIDAFKTRKQDQRETYIPPHTSKCTVG
HCCCCCEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEC
FSTESVLEALGGSLQPLIDQITNGNIRGIATVVGCTTAQYGQGGSNVFKITKGLIENNIL
CCHHHHHHHHCCCHHHHHHHHCCCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHCCEE
VLSGGCTSSVMEYTNLTNPEAAEDAGDGLKAVCQQLGIPPVLSYGACVDIGKMTHTAVAL
EEECCCHHHHHHHHCCCCCCHHHHCCCHHHHHHHHCCCCCHHCCCCCEEHHHHHHHHHHH
ADELGVDTNQLPLVIGAPEYLEQKAVADACTAVALGWLVHVAPVPSVTGSETVVETLTKT
HHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
TEEMGLGKLMVEMDADRAVKTYVDHIETKRKELGI
HHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIFRRGKVSNKEKHNDLGGTNDPKDHEDLHAQIKVDYQSIDKSPQGKQLHDWQREHIKGA
CCCCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCHHHHHHHHHCCCC
DQSKEGYPMNVILDPAMREMYQVVNKSKMTNVFDRFSEQQPQCKFCIEGLSCQLCANGPC
CCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCC
RISERAPRGVCGVDAHTMVARNFNYRHVTIGTSANIFHAHQAARTLKAAATNPESGLKIR
CCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEC
DQDKLKFFAGMLGINTDADINQIAIDFADTVIDDIHGPYHIESKLVNAFAPEKRKNLWRD
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCHHHHHHHHH
LGIFPGGGYSEVAYAQTMSMTNFTSDPVAFLLNGVRMGIANEYQGLFALDILQEILIGSQ
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHCCH
KITEQEQNMGLLKENQVNIITNGHMPLLAHVAIEKASSEEWQQKAKEAGAEGIQVLGHVC
HHHHHHHCCCCEECCCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHH
EGQQLLNYEGSQNMSAYTGQEGEWLSEEYVLATGVVDLFMFDYNCTVPTLPLYAERFGTK
CCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCHHHHHHHCCH
LVSTHPVIKLQGTETIDFVPEKMNEQADKVLDMAIDAFKTRKQDQRETYIPPHTSKCTVG
HCCCCCEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEC
FSTESVLEALGGSLQPLIDQITNGNIRGIATVVGCTTAQYGQGGSNVFKITKGLIENNIL
CCHHHHHHHHCCCHHHHHHHHCCCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHCCEE
VLSGGCTSSVMEYTNLTNPEAAEDAGDGLKAVCQQLGIPPVLSYGACVDIGKMTHTAVAL
EEECCCHHHHHHHHCCCCCCHHHHCCCHHHHHHHHCCCCCHHCCCCCEEHHHHHHHHHHH
ADELGVDTNQLPLVIGAPEYLEQKAVADACTAVALGWLVHVAPVPSVTGSETVVETLTKT
HHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
TEEMGLGKLMVEMDADRAVKTYVDHIETKRKELGI
HHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]