| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is yjjP [C]
Identifier: 188585483
GI number: 188585483
Start: 899430
End: 900212
Strand: Reverse
Name: yjjP [C]
Synonym: Nther_0855
Alternate gene names: 188585483
Gene position: 900212-899430 (Counterclockwise)
Preceding gene: 188585488
Following gene: 188585482
Centisome position: 28.44
GC content: 37.04
Gene sequence:
>783_bases GTGCTTAACAAAAAAGAAATACTAGTTTTAGCCGTTTACGCAGGGGAAATCATGCTCGAAAATGGTGCTGAAACCTATAG AGTTGAAGATACAATTATCCGCTTATGTAAATCTAGAGGTTATTCATATGTAGAAACCTTTGTTACCCCTACCGGTATTT TTGTATCTATTGATAAAAAGAACACTTATGATGCAATGACTTCCCACATGAAAAGAATTCGGTCCAGAAATATAAATTTA AGTAAAGTAGCGGAAGTGAATGACTTTTCTCGCACCTTTGTAAATAGTGATATGGATGCAAAGGAAGGTATGAAACTGTT AAAAGAAATTGATGCTACACCCAGTTACTCCAGATTCACTAAAATAATTTTTGGCGGTATAGCCAGCGGCTTCTTTTCAC TATTGTTTCAATCAAACCTTCCCGAGGCGTTAAGCGCCTTTATCACTGGAATTATAGTCACGGGAACACTAATTTATCTA AAAGATAGAAAAATGCCCTTTTTCCTGGCCAATATTGTCGGTGGGGCTACTTTAGCCTTGATAGCAATTGTGCTTTCTAC GTTTAGTTATTCAATTGATATAGACAATATAATAATTGGCGCTATCATGGTAATGGTCCCTGGAGTAGCTATAACTAATG CCGTTAGAGATTCCATAATTGGTGACCTACTGGCCGGATTAGCTAGAGCTGGAGAAGCCTTTATCATAGCTATTAGTATT GCCTTTGGTGTTGGTTCAATATTGACAGTTTGGTCGTTAATCATGGAGGGGAATTTAATATGA
Upstream 100 bases:
>100_bases GAACCCAAATTTCTATATACACCTCAAAAAACAATTGTTATAATAAGCTAGATAGCTAAAATTGTGTTCATGACGGGTAT AGGTAGTGAGGTGAAGAAAA
Downstream 100 bases:
>100_bases TATATATCGCTAACTTCATCTATGGCTTTATGTGTACAGTGGGCTTTGCCGTGATTTTTAACAGTAGAAAATCCTCTTTA GTTAAAGCCGGTTTAGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MLNKKEILVLAVYAGEIMLENGAETYRVEDTIIRLCKSRGYSYVETFVTPTGIFVSIDKKNTYDAMTSHMKRIRSRNINL SKVAEVNDFSRTFVNSDMDAKEGMKLLKEIDATPSYSRFTKIIFGGIASGFFSLLFQSNLPEALSAFITGIIVTGTLIYL KDRKMPFFLANIVGGATLALIAIVLSTFSYSIDIDNIIIGAIMVMVPGVAITNAVRDSIIGDLLAGLARAGEAFIIAISI AFGVGSILTVWSLIMEGNLI
Sequences:
>Translated_260_residues MLNKKEILVLAVYAGEIMLENGAETYRVEDTIIRLCKSRGYSYVETFVTPTGIFVSIDKKNTYDAMTSHMKRIRSRNINL SKVAEVNDFSRTFVNSDMDAKEGMKLLKEIDATPSYSRFTKIIFGGIASGFFSLLFQSNLPEALSAFITGIIVTGTLIYL KDRKMPFFLANIVGGATLALIAIVLSTFSYSIDIDNIIIGAIMVMVPGVAITNAVRDSIIGDLLAGLARAGEAFIIAISI AFGVGSILTVWSLIMEGNLI >Mature_260_residues MLNKKEILVLAVYAGEIMLENGAETYRVEDTIIRLCKSRGYSYVETFVTPTGIFVSIDKKNTYDAMTSHMKRIRSRNINL SKVAEVNDFSRTFVNSDMDAKEGMKLLKEIDATPSYSRFTKIIFGGIASGFFSLLFQSNLPEALSAFITGIIVTGTLIYL KDRKMPFFLANIVGGATLALIAIVLSTFSYSIDIDNIIIGAIMVMVPGVAITNAVRDSIIGDLLAGLARAGEAFIIAISI AFGVGSILTVWSLIMEGNLI
Specific function: Unknown
COG id: COG2966
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082435, Length=254, Percent_Identity=24.0157480314961, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28352; Mature: 28352
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNKKEILVLAVYAGEIMLENGAETYRVEDTIIRLCKSRGYSYVETFVTPTGIFVSIDKK CCCCCEEEEEEEEECEEEEECCCCCEEHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECC NTYDAMTSHMKRIRSRNINLSKVAEVNDFSRTFVNSDMDAKEGMKLLKEIDATPSYSRFT CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHH KIIFGGIASGFFSLLFQSNLPEALSAFITGIIVTGTLIYLKDRKMPFFLANIVGGATLAL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHH IAIVLSTFSYSIDIDNIIIGAIMVMVPGVAITNAVRDSIIGDLLAGLARAGEAFIIAISI HHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEH AFGVGSILTVWSLIMEGNLI HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLNKKEILVLAVYAGEIMLENGAETYRVEDTIIRLCKSRGYSYVETFVTPTGIFVSIDKK CCCCCEEEEEEEEECEEEEECCCCCEEHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECC NTYDAMTSHMKRIRSRNINLSKVAEVNDFSRTFVNSDMDAKEGMKLLKEIDATPSYSRFT CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHH KIIFGGIASGFFSLLFQSNLPEALSAFITGIIVTGTLIYLKDRKMPFFLANIVGGATLAL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHH IAIVLSTFSYSIDIDNIIIGAIMVMVPGVAITNAVRDSIIGDLLAGLARAGEAFIIAISI HHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEH AFGVGSILTVWSLIMEGNLI HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA