| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is uhpC [C]
Identifier: 188585480
GI number: 188585480
Start: 896895
End: 898211
Strand: Direct
Name: uhpC [C]
Synonym: Nther_0852
Alternate gene names: 188585480
Gene position: 896895-898211 (Clockwise)
Preceding gene: 188585479
Following gene: 188585481
Centisome position: 28.33
GC content: 37.81
Gene sequence:
>1317_bases ATGGCTGATAAGAAAACTTTGATTACACTTGTAATAATTTCTACTGCATATATAGCAGGTGTTGCAAATATTCAGGGCTT TTTAGCATTGCTACCCATGGTTCAAGAAGAATTTCTATTGAGCAAAACACAGGTGGGTTTGTACTCTAGCTTTCACTTTT TGAGTGCTATAATGTTGGCTGTATTTAGTGGTAAGATTGTAGACCGGCTGGGAACTAAGAGGGGACTGTTTTTGGGAGTC TTCATAGCCGGTATTTTAATGATTTTACATTCATTCTCACCTTATTTTGGAATTATTCTTTGTTTAGCTTTTTTTACGGG ATTAGCCTTTAGTATAGTCACCCCTTCTGCTAATAAAGCCGTACTGGAGTTGGCAGAACCTACTCAAAGAAGTTTTTTCA TGGGAATTGTTCACAGTGGCAGTGGTGTTGGTGGTATTATTGGAGCCACTCTGCTTCCTATTTTAGGTGGTATAATGGGA TGGAGGCCGCCGCTAGTAATTTCTGGTTCGTTCGCTGTATTAGTTGCTATTTTAATTTTACTTTGTTATAAATCCCCGAA TACAACATCTCAGACTAATAACCAAGTTCAAGGCAGTCAAACTAACAATCAAAGTAACAGTCTGGATAACAATCTAGATA ACAATCAAAATAAGAATCAAAATGAAAACCAAGGGGGAGCAGGCTCTTTAAAAGATAATTTGGTATTTTTCATACAAAAT CGTTATTTAGTACTCATTTGTATAATGGGTTTTGCTTTTGGTGTTAGTGCTTCCACAGCTATAGGACATTATACTGTTTA TCTAACAGGGGATTTGGGCTTTGGCTCTACTTTGGCGGGTGTTTGTTTAGGCCTGGTACATGCTGGCGGGATCCTAGGCC AGCCGACCTGGGGACTGGTCAATGAAAAAGTATTTTCTGGCAATAGAAGGAAAGGGTTAATACTACACGGAATATTAATA ACAGTCCTGTTTATTTTATACGGTTTGGTAGTCAGTCCTTTACAACCAAATCCGGTACTGGTTATGTTGTTATCCTTTAT TCTTGGGTATAATACCATCGGTGTAATTGCTGTATATTTCACAACAATTGGTGAACTAGCGCCCAAGGAAAGTGTCGGTG TAATCACTGGAATAGCTTTAATCTTCCCCAGAACCGGTATGATCTTTGGTCCTCCGGTATTTGGCTATTTTGCTGATATC ACTGCGAGTTATGCTTATAGTTGGTTAGTAATTGGATCTTTGATTTTTATTATCACAGCAGGTTTTTGGTATTTTAGTAG GAAAACAGAATTACCTGTTACTATTTTGAGTGACTAA
Upstream 100 bases:
>100_bases CTGATCCATTCATGGTTGAATCTCAACAAGTTTTCAAGGGATATAAAAATGGATGTAGAATAGGATATAAAAGAGGGTTG TGTAGTTGAGAGGTGATTGT
Downstream 100 bases:
>100_bases CTTGAAGGAGGTCAAAAATATGAAACAAATTTATGAGGGAAAGACCAAGAAAGTATTTTTGAATGAGAAAGGTAATTTAG TTCTTTACTTTAAAGATGAG
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: Facilitator Family Transporter
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MADKKTLITLVIISTAYIAGVANIQGFLALLPMVQEEFLLSKTQVGLYSSFHFLSAIMLAVFSGKIVDRLGTKRGLFLGV FIAGILMILHSFSPYFGIILCLAFFTGLAFSIVTPSANKAVLELAEPTQRSFFMGIVHSGSGVGGIIGATLLPILGGIMG WRPPLVISGSFAVLVAILILLCYKSPNTTSQTNNQVQGSQTNNQSNSLDNNLDNNQNKNQNENQGGAGSLKDNLVFFIQN RYLVLICIMGFAFGVSASTAIGHYTVYLTGDLGFGSTLAGVCLGLVHAGGILGQPTWGLVNEKVFSGNRRKGLILHGILI TVLFILYGLVVSPLQPNPVLVMLLSFILGYNTIGVIAVYFTTIGELAPKESVGVITGIALIFPRTGMIFGPPVFGYFADI TASYAYSWLVIGSLIFIITAGFWYFSRKTELPVTILSD
Sequences:
>Translated_438_residues MADKKTLITLVIISTAYIAGVANIQGFLALLPMVQEEFLLSKTQVGLYSSFHFLSAIMLAVFSGKIVDRLGTKRGLFLGV FIAGILMILHSFSPYFGIILCLAFFTGLAFSIVTPSANKAVLELAEPTQRSFFMGIVHSGSGVGGIIGATLLPILGGIMG WRPPLVISGSFAVLVAILILLCYKSPNTTSQTNNQVQGSQTNNQSNSLDNNLDNNQNKNQNENQGGAGSLKDNLVFFIQN RYLVLICIMGFAFGVSASTAIGHYTVYLTGDLGFGSTLAGVCLGLVHAGGILGQPTWGLVNEKVFSGNRRKGLILHGILI TVLFILYGLVVSPLQPNPVLVMLLSFILGYNTIGVIAVYFTTIGELAPKESVGVITGIALIFPRTGMIFGPPVFGYFADI TASYAYSWLVIGSLIFIITAGFWYFSRKTELPVTILSD >Mature_437_residues ADKKTLITLVIISTAYIAGVANIQGFLALLPMVQEEFLLSKTQVGLYSSFHFLSAIMLAVFSGKIVDRLGTKRGLFLGVF IAGILMILHSFSPYFGIILCLAFFTGLAFSIVTPSANKAVLELAEPTQRSFFMGIVHSGSGVGGIIGATLLPILGGIMGW RPPLVISGSFAVLVAILILLCYKSPNTTSQTNNQVQGSQTNNQSNSLDNNLDNNQNKNQNENQGGAGSLKDNLVFFIQNR YLVLICIMGFAFGVSASTAIGHYTVYLTGDLGFGSTLAGVCLGLVHAGGILGQPTWGLVNEKVFSGNRRKGLILHGILIT VLFILYGLVVSPLQPNPVLVMLLSFILGYNTIGVIAVYFTTIGELAPKESVGVITGIALIFPRTGMIFGPPVFGYFADIT ASYAYSWLVIGSLIFIITAGFWYFSRKTELPVTILSD
Specific function: Uhpc Is Required For Uhpt Expression, It May Act Jointly With The Uhpb Signaling Protein. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI256219598, Length=399, Percent_Identity=22.8070175438596, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI4503847, Length=399, Percent_Identity=22.8070175438596, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI256219483, Length=399, Percent_Identity=22.8070175438596, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI256219543, Length=420, Percent_Identity=21.9047619047619, Blast_Score=70, Evalue=4e-12, Organism=Escherichia coli, GI87082310, Length=373, Percent_Identity=22.5201072386059, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46895; Mature: 46764
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKKTLITLVIISTAYIAGVANIQGFLALLPMVQEEFLLSKTQVGLYSSFHFLSAIMLA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFSGKIVDRLGTKRGLFLGVFIAGILMILHSFSPYFGIILCLAFFTGLAFSIVTPSANKA HHCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCCHH VLELAEPTQRSFFMGIVHSGSGVGGIIGATLLPILGGIMGWRPPLVISGSFAVLVAILIL HHHHCCCHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHH LCYKSPNTTSQTNNQVQGSQTNNQSNSLDNNLDNNQNKNQNENQGGAGSLKDNLVFFIQN HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC RYLVLICIMGFAFGVSASTAIGHYTVYLTGDLGFGSTLAGVCLGLVHAGGILGQPTWGLV CHHHHHHHHHHHHCCCCCCEECEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHH NEKVFSGNRRKGLILHGILITVLFILYGLVVSPLQPNPVLVMLLSFILGYNTIGVIAVYF HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHH TTIGELAPKESVGVITGIALIFPRTGMIFGPPVFGYFADITASYAYSWLVIGSLIFIITA HHHHHCCCCCCCHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFWYFSRKTELPVTILSD HHHHCCCCCCCCEEEECC >Mature Secondary Structure ADKKTLITLVIISTAYIAGVANIQGFLALLPMVQEEFLLSKTQVGLYSSFHFLSAIMLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFSGKIVDRLGTKRGLFLGVFIAGILMILHSFSPYFGIILCLAFFTGLAFSIVTPSANKA HHCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCCHH VLELAEPTQRSFFMGIVHSGSGVGGIIGATLLPILGGIMGWRPPLVISGSFAVLVAILIL HHHHCCCHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHH LCYKSPNTTSQTNNQVQGSQTNNQSNSLDNNLDNNQNKNQNENQGGAGSLKDNLVFFIQN HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC RYLVLICIMGFAFGVSASTAIGHYTVYLTGDLGFGSTLAGVCLGLVHAGGILGQPTWGLV CHHHHHHHHHHHHCCCCCCEECEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHH NEKVFSGNRRKGLILHGILITVLFILYGLVVSPLQPNPVLVMLLSFILGYNTIGVIAVYF HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHH TTIGELAPKESVGVITGIALIFPRTGMIFGPPVFGYFADITASYAYSWLVIGSLIFIITA HHHHHCCCCCCCHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFWYFSRKTELPVTILSD HHHHCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA