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The map label for this gene is 188585477

Identifier: 188585477

GI number: 188585477

Start: 894918

End: 895778

Strand: Direct

Name: 188585477

Synonym: Nther_0849

Alternate gene names: NA

Gene position: 894918-895778 (Clockwise)

Preceding gene: 188585476

Following gene: 188585479

Centisome position: 28.27

GC content: 31.13

Gene sequence:

>861_bases
ATGGAAGGTCTGTGTTCCTTAATTTTTTTGGGATTTATTGGATTTGTAATTTATAACTTTTTTATGAATATCAAGGGTTA
TTTTGCCATCAAGAAAACTAATAAAATTATGGGGAAAGCAGGAGACTTAGTAACAGATGAAGATGTAGATCAAATTATTA
AAACATTGAAAGGCAATATTCCAAACCATCCTAAATACTGGAATAATTTAAAATCCCATTTTTCTATGGTAAACAATTCA
GAGCATGTATCATACTCCAAAAAAGAGCGATTGAAAAATCTACTTATTAAAAAAGGGGTACATGTTGGGGGAATAAAACT
TAAGAAAAATAGGAAAGAAATAAAAGAAGAGAACTTTGAAATCGGGAACAAAGGGGAAGAAGAAGTCAAACATAATCTTA
ACTTTATGAAAGTTAACGGATATCATATATTGAATAATGTAAAATTAAGTAGTCCTGCTGGGCGCCAGGAGATAGATCAT
ATAATTATTGGTGAAACGGGTATTTTCCACGTTGAGACAAAGGCTTTTAAAGGCCAAGGTAAGATAGTTATAGATGAAGA
TGGTAACTGGTTTAAAGAAATGGGTAACAAAACTAGTGTGATTAAAAATCCCATTGCTCAAGTTGACCGCCATGATAGTG
TAATTAAAAACTTATTGAAAAATCAACTTCCTGGTACTGAAAAGTTTGTTACTCCTGTAATAGTGATTGCCACAGAATCC
TTTATAATCAAAGGGCGAAAAAATTGTCCTGTAACTGTACTTAAAGCAGAAGAATTATCCCAGTTTGTGAAAAATTATGA
TAGAAACGAACAGCTAGATGAAGAGACAGTGAAAAAAGTCTATCAAAAATTAAATAAATAA

Upstream 100 bases:

>100_bases
AATTTAGTGTGAGATTAGCAGATTAGATCTCTTGGTTCTGATATATTACGATAATTACTCCACTAATATTCGACTAATTG
ATTTAGGAGGGGATATAGAA

Downstream 100 bases:

>100_bases
ATTTCTAAGTACAGAGTAAAATGTAACAACGACTACTGCTAACATTAATTTAGCGGGACGGATGTCCAGCTCTAGAATTG
ACTTTCCTTTAATGAATAAC

Product: NERD domain protein

Products: NA

Alternate protein names: NERD Domain Protein

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MEGLCSLIFLGFIGFVIYNFFMNIKGYFAIKKTNKIMGKAGDLVTDEDVDQIIKTLKGNIPNHPKYWNNLKSHFSMVNNS
EHVSYSKKERLKNLLIKKGVHVGGIKLKKNRKEIKEENFEIGNKGEEEVKHNLNFMKVNGYHILNNVKLSSPAGRQEIDH
IIIGETGIFHVETKAFKGQGKIVIDEDGNWFKEMGNKTSVIKNPIAQVDRHDSVIKNLLKNQLPGTEKFVTPVIVIATES
FIIKGRKNCPVTVLKAEELSQFVKNYDRNEQLDEETVKKVYQKLNK

Sequences:

>Translated_286_residues
MEGLCSLIFLGFIGFVIYNFFMNIKGYFAIKKTNKIMGKAGDLVTDEDVDQIIKTLKGNIPNHPKYWNNLKSHFSMVNNS
EHVSYSKKERLKNLLIKKGVHVGGIKLKKNRKEIKEENFEIGNKGEEEVKHNLNFMKVNGYHILNNVKLSSPAGRQEIDH
IIIGETGIFHVETKAFKGQGKIVIDEDGNWFKEMGNKTSVIKNPIAQVDRHDSVIKNLLKNQLPGTEKFVTPVIVIATES
FIIKGRKNCPVTVLKAEELSQFVKNYDRNEQLDEETVKKVYQKLNK
>Mature_286_residues
MEGLCSLIFLGFIGFVIYNFFMNIKGYFAIKKTNKIMGKAGDLVTDEDVDQIIKTLKGNIPNHPKYWNNLKSHFSMVNNS
EHVSYSKKERLKNLLIKKGVHVGGIKLKKNRKEIKEENFEIGNKGEEEVKHNLNFMKVNGYHILNNVKLSSPAGRQEIDH
IIIGETGIFHVETKAFKGQGKIVIDEDGNWFKEMGNKTSVIKNPIAQVDRHDSVIKNLLKNQLPGTEKFVTPVIVIATES
FIIKGRKNCPVTVLKAEELSQFVKNYDRNEQLDEETVKKVYQKLNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32675; Mature: 32675

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS50965 NERD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGLCSLIFLGFIGFVIYNFFMNIKGYFAIKKTNKIMGKAGDLVTDEDVDQIIKTLKGNI
CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHCCCCCCCCHHHHHHHHHHHCCCC
PNHPKYWNNLKSHFSMVNNSEHVSYSKKERLKNLLIKKGVHVGGIKLKKNRKEIKEENFE
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHCCC
IGNKGEEEVKHNLNFMKVNGYHILNNVKLSSPAGRQEIDHIIIGETGIFHVETKAFKGQG
CCCCCHHHHHHCCCEEEECCEEEEECEEECCCCCHHHCCEEEECCCCEEEEEEHEECCCC
KIVIDEDGNWFKEMGNKTSVIKNPIAQVDRHDSVIKNLLKNQLPGTEKFVTPVIVIATES
CEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEEECH
FIIKGRKNCPVTVLKAEELSQFVKNYDRNEQLDEETVKKVYQKLNK
HEEECCCCCCEEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MEGLCSLIFLGFIGFVIYNFFMNIKGYFAIKKTNKIMGKAGDLVTDEDVDQIIKTLKGNI
CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHCCCCCCCCHHHHHHHHHHHCCCC
PNHPKYWNNLKSHFSMVNNSEHVSYSKKERLKNLLIKKGVHVGGIKLKKNRKEIKEENFE
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHCCC
IGNKGEEEVKHNLNFMKVNGYHILNNVKLSSPAGRQEIDHIIIGETGIFHVETKAFKGQG
CCCCCHHHHHHCCCEEEECCEEEEECEEECCCCCHHHCCEEEECCCCEEEEEEHEECCCC
KIVIDEDGNWFKEMGNKTSVIKNPIAQVDRHDSVIKNLLKNQLPGTEKFVTPVIVIATES
CEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEEECH
FIIKGRKNCPVTVLKAEELSQFVKNYDRNEQLDEETVKKVYQKLNK
HEEECCCCCCEEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA