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The map label for this gene is 188585467

Identifier: 188585467

GI number: 188585467

Start: 879499

End: 881208

Strand: Reverse

Name: 188585467

Synonym: Nther_0839

Alternate gene names: NA

Gene position: 881208-879499 (Counterclockwise)

Preceding gene: 188585478

Following gene: 188585466

Centisome position: 27.84

GC content: 30.76

Gene sequence:

>1710_bases
ATGAAATTTATCAGTTTTTCAGAAGAAGATTGCGTAAATTGCTATAGATGTATCAGAGCATGTAATACTAAAGCTATATC
TGTTTTTGGAGATCCCCGGGAAAACGATGAAAAGCTTTGTATATCTTGTGGAGAGTGTTATGTTGCTTGTGAACGAAATG
GTTTGACTATAAAGGATAAAGTTAAAGAAGTTAAGGATGCTTTATCTTCCAATAAAAAAGTAATAGCCAGTTTAGCACCT
TCCTTTCCTGGTGCATTTTCTATAAAAGAAGGTGGAAAAATTGTTACTGCTTTAAAAGAATTAGGATTCTATGCAGTAGA
AGAAACAGCAGTTGGAGCTGATGTTGTAATAAATGCTTATGAAAACTTCACTAATGATGCAAAGCAAAAAAATTTGATTT
CAACAAGTTGTCCTTCTACAGTCTATTTAGTCGAAAAATACTATCCTGAGTTAGTAAATTATCTAATACCTGTAGTGTCA
CCTATGATTGCCCATGGAAAAATGATTCGTGAAAAATATGGTGAAGATGCATATATAGTTTTTATAGGGCCTTGTATTGC
TAAAAAAGTAGAAGCTCACGAAAGTCAATATAATGGAATAATTAATTCTGTGCTCACTTTTGTTGAATTACAAAAATGGT
TTAAAGATAATAATTTAGATCTCAAAAACCAATCACCAGAGCCTTTTGATGAAAAAGCTAATGATAAGGGAAAGTTAATA
CCTTGCAATATCAAGTTATCTAATGAAAAAAATGAAAACTATGAAAAGATAGTTGTCACTGGGGTAGAGCGTTCTAAGGA
AATTTTAAATAGTTTAAAGAAAGGTGAGCTCAGCGGTATATTTTTAGAAATCTTATCTTGTCCTGGAGGATGTATAGATG
GCACAGGTATGCTTAAAGAGGCACCAAGCTATTATGTTAGAAAAAAGTATGTTAAAGATTATATTGCTAAAAAGTGTAGT
GATGATGTCAAAATAGAAAATAAGTTTGCACAAAAAATTGATATCGAAAGACATGTATCTTCAAAAAAAGTTAAAAAATA
TCGCCACCCTAAAGAACAAATTGACGAAGTCTTAAATAGTATAGGTAAAAATAAAAAAGAAGATGAGCTAAATTGTAATG
CTTGTGGTTATGTTACATGTAGAGAATTTGCAGAGTCAATTTTAAGAAAAAACGCCCATGTTAACATGTGTCATCCTTTT
ATGCGGTCAAAAGCAGAAAGCTTGAAAAATGTGATTTTTGATCATAGTCCCAATGCAATATTTATGGTTGATTTTAATTT
GGTAGTAAGAGAATTCAATCCTTCTTCGGAACAAATATTTAACATAGAAGCTAATAAAATAAAAGGCAAGAGAATTGGTG
AGATAATTGAAGAAGACACATTTAAAAAAGTTTTAGAAACCAAAACTAATCTTATAGGAAAAAAAGTCGAGTATTCTAAT
TATGGTGTTATATTAATAGCTAATATTATATACCTCAAAGAAGAAAAAGTATTAATGGCTATCATGACTGATGTAACTTC
AGCAGAAAAAAATAAAGAGGAGTTAGTAAGAGTTAAAAAAAACACCATTGATGTCGCTCAAAGTGTTATAGATAAGCAAA
TGAGGGTTGCACAAGAAATTGCTAGTCTTTTAGGAGAAACTACAGCAGAAACTAAAGTTGCATTAACGGATTTAAAAGAT
ATTGTCATTGAGGAACGGAGGGATGATTAA

Upstream 100 bases:

>100_bases
ACTACAATACAACCTAAATCAAAATATATGGTTGGATTTAGAAATAAAATGAGTTATAATATAATAAGCATGTGAATCAA
GTAACAAAGGAGTGAAAAAA

Downstream 100 bases:

>100_bases
TTGGGCTTTTTTATAGATTATGCTTATGATTTCATAAATAAGAAAAATGAAGAGCTCTGTGGAGATAATATAGAAGTTAT
AGAAACAGAAGAAAATATTA

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: CpI; Fe-only hydrogenase; [Fe] hydrogenase [H]

Number of amino acids: Translated: 569; Mature: 569

Protein sequence:

>569_residues
MKFISFSEEDCVNCYRCIRACNTKAISVFGDPRENDEKLCISCGECYVACERNGLTIKDKVKEVKDALSSNKKVIASLAP
SFPGAFSIKEGGKIVTALKELGFYAVEETAVGADVVINAYENFTNDAKQKNLISTSCPSTVYLVEKYYPELVNYLIPVVS
PMIAHGKMIREKYGEDAYIVFIGPCIAKKVEAHESQYNGIINSVLTFVELQKWFKDNNLDLKNQSPEPFDEKANDKGKLI
PCNIKLSNEKNENYEKIVVTGVERSKEILNSLKKGELSGIFLEILSCPGGCIDGTGMLKEAPSYYVRKKYVKDYIAKKCS
DDVKIENKFAQKIDIERHVSSKKVKKYRHPKEQIDEVLNSIGKNKKEDELNCNACGYVTCREFAESILRKNAHVNMCHPF
MRSKAESLKNVIFDHSPNAIFMVDFNLVVREFNPSSEQIFNIEANKIKGKRIGEIIEEDTFKKVLETKTNLIGKKVEYSN
YGVILIANIIYLKEEKVLMAIMTDVTSAEKNKEELVRVKKNTIDVAQSVIDKQMRVAQEIASLLGETTAETKVALTDLKD
IVIEERRDD

Sequences:

>Translated_569_residues
MKFISFSEEDCVNCYRCIRACNTKAISVFGDPRENDEKLCISCGECYVACERNGLTIKDKVKEVKDALSSNKKVIASLAP
SFPGAFSIKEGGKIVTALKELGFYAVEETAVGADVVINAYENFTNDAKQKNLISTSCPSTVYLVEKYYPELVNYLIPVVS
PMIAHGKMIREKYGEDAYIVFIGPCIAKKVEAHESQYNGIINSVLTFVELQKWFKDNNLDLKNQSPEPFDEKANDKGKLI
PCNIKLSNEKNENYEKIVVTGVERSKEILNSLKKGELSGIFLEILSCPGGCIDGTGMLKEAPSYYVRKKYVKDYIAKKCS
DDVKIENKFAQKIDIERHVSSKKVKKYRHPKEQIDEVLNSIGKNKKEDELNCNACGYVTCREFAESILRKNAHVNMCHPF
MRSKAESLKNVIFDHSPNAIFMVDFNLVVREFNPSSEQIFNIEANKIKGKRIGEIIEEDTFKKVLETKTNLIGKKVEYSN
YGVILIANIIYLKEEKVLMAIMTDVTSAEKNKEELVRVKKNTIDVAQSVIDKQMRVAQEIASLLGETTAETKVALTDLKD
IVIEERRDD
>Mature_569_residues
MKFISFSEEDCVNCYRCIRACNTKAISVFGDPRENDEKLCISCGECYVACERNGLTIKDKVKEVKDALSSNKKVIASLAP
SFPGAFSIKEGGKIVTALKELGFYAVEETAVGADVVINAYENFTNDAKQKNLISTSCPSTVYLVEKYYPELVNYLIPVVS
PMIAHGKMIREKYGEDAYIVFIGPCIAKKVEAHESQYNGIINSVLTFVELQKWFKDNNLDLKNQSPEPFDEKANDKGKLI
PCNIKLSNEKNENYEKIVVTGVERSKEILNSLKKGELSGIFLEILSCPGGCIDGTGMLKEAPSYYVRKKYVKDYIAKKCS
DDVKIENKFAQKIDIERHVSSKKVKKYRHPKEQIDEVLNSIGKNKKEDELNCNACGYVTCREFAESILRKNAHVNMCHPF
MRSKAESLKNVIFDHSPNAIFMVDFNLVVREFNPSSEQIFNIEANKIKGKRIGEIIEEDTFKKVLETKTNLIGKKVEYSN
YGVILIANIIYLKEEKVLMAIMTDVTSAEKNKEELVRVKKNTIDVAQSVIDKQMRVAQEIASLLGETTAETKVALTDLKD
IVIEERRDD

Specific function: Unknown

COG id: COG4624

COG function: function code R; Iron only hydrogenase large subunit, C-terminal domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR012675
- InterPro:   IPR009016
- InterPro:   IPR004108
- InterPro:   IPR003149
- InterPro:   IPR013352
- InterPro:   IPR001041 [H]

Pfam domain/function: PF02906 Fe_hyd_lg_C; PF02256 Fe_hyd_SSU [H]

EC number: =1.12.7.2 [H]

Molecular weight: Translated: 64232; Mature: 64232

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: PS50112 PAS ; PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFISFSEEDCVNCYRCIRACNTKAISVFGDPRENDEKLCISCGECYVACERNGLTIKDK
CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCEEEEECCCCCCHHHH
VKEVKDALSSNKKVIASLAPSFPGAFSIKEGGKIVTALKELGFYAVEETAVGADVVINAY
HHHHHHHHCCCCCEEEHHCCCCCCCEEECCCCHHHHHHHHCCCEEEHHHCCCHHHEEECH
ENFTNDAKQKNLISTSCPSTVYLVEKYYPELVNYLIPVVSPMIAHGKMIREKYGEDAYIV
HHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
FIGPCIAKKVEAHESQYNGIINSVLTFVELQKWFKDNNLDLKNQSPEPFDEKANDKGKLI
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE
PCNIKLSNEKNENYEKIVVTGVERSKEILNSLKKGELSGIFLEILSCPGGCIDGTGMLKE
EEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHH
APSYYVRKKYVKDYIAKKCSDDVKIENKFAQKIDIERHVSSKKVKKYRHPKEQIDEVLNS
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IGKNKKEDELNCNACGYVTCREFAESILRKNAHVNMCHPFMRSKAESLKNVIFDHSPNAI
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEE
FMVDFNLVVREFNPSSEQIFNIEANKIKGKRIGEIIEEDTFKKVLETKTNLIGKKVEYSN
EEEEEEEEEEECCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC
YGVILIANIIYLKEEKVLMAIMTDVTSAEKNKEELVRVKKNTIDVAQSVIDKQMRVAQEI
CCEEEEEEEHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLLGETTAETKVALTDLKDIVIEERRDD
HHHHCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKFISFSEEDCVNCYRCIRACNTKAISVFGDPRENDEKLCISCGECYVACERNGLTIKDK
CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCEEEEECCCCCCHHHH
VKEVKDALSSNKKVIASLAPSFPGAFSIKEGGKIVTALKELGFYAVEETAVGADVVINAY
HHHHHHHHCCCCCEEEHHCCCCCCCEEECCCCHHHHHHHHCCCEEEHHHCCCHHHEEECH
ENFTNDAKQKNLISTSCPSTVYLVEKYYPELVNYLIPVVSPMIAHGKMIREKYGEDAYIV
HHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
FIGPCIAKKVEAHESQYNGIINSVLTFVELQKWFKDNNLDLKNQSPEPFDEKANDKGKLI
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE
PCNIKLSNEKNENYEKIVVTGVERSKEILNSLKKGELSGIFLEILSCPGGCIDGTGMLKE
EEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHH
APSYYVRKKYVKDYIAKKCSDDVKIENKFAQKIDIERHVSSKKVKKYRHPKEQIDEVLNS
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IGKNKKEDELNCNACGYVTCREFAESILRKNAHVNMCHPFMRSKAESLKNVIFDHSPNAI
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEE
FMVDFNLVVREFNPSSEQIFNIEANKIKGKRIGEIIEEDTFKKVLETKTNLIGKKVEYSN
EEEEEEEEEEECCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC
YGVILIANIIYLKEEKVLMAIMTDVTSAEKNKEELVRVKKNTIDVAQSVIDKQMRVAQEI
CCEEEEEEEHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLLGETTAETKVALTDLKDIVIEERRDD
HHHHCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1911757; 9836629; 10529166 [H]