| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188585466
Identifier: 188585466
GI number: 188585466
Start: 878329
End: 879498
Strand: Reverse
Name: 188585466
Synonym: Nther_0838
Alternate gene names: NA
Gene position: 879498-878329 (Counterclockwise)
Preceding gene: 188585467
Following gene: 188585465
Centisome position: 27.78
GC content: 32.99
Gene sequence:
>1170_bases TTGGGCTTTTTTATAGATTATGCTTATGATTTCATAAATAAGAAAAATGAAGAGCTCTGTGGAGATAATATAGAAGTTAT AGAAACAGAAGAAAATATTATCATCATTTTATCTGATGGACTTGGTAGTGGTGTAAAGGCTAATATCCTGGCAACAATGA CAACGAAAATAGCCGGGACAATGTTAAAGGGCGGAGCAACAGTATATGAAACCGTAGAAACCATAGCAAGTACATTACCG GTTTGTAATGTTCGTAAATTAGCCTACTCTACTTTTGCAATATTAAAGATATCTAAAAATGGAAAAGTTCATATTGTAGA GTATGATAACCCTCCTGTTTTTTTTATTAGAAATGGTGGTCTCGTTAAACTAAACAAAAAAGAACAAATAATACATGGAA AAAAAATATTAGAAAGTAAAGCCCAACTGATAAAGGGTGATAGTTTAATTCTTGTCAGTGATGGTGTTATACATGCAGGA GTGGGAGAAGTACTCACTTTAGGTTGGAAGTGGGAAAATGTAGCCAAATATTTAATTAAACAATCAAAAATCGAAGAATG TGCTAAAGTGATTTCTAGAAGAGTTGTTGACACATCTAATTTTTTCTTTAACCAAAGACCAGGAGATGACATATCAGTTG CCGTTGTAAAAGCCCGAGAAACTGAAGTTTTGCAAGTTTTTTCTGGTCCACCTAAAAACAAAAAAGATGATCCCATATTA GTACAAAAAATTTTACAATCAAAAGGCAAAAAGATCGTTTGTGGTGGAACCGCAGCAAATATAGTAAGTAGAGAAACTGG TAAAGATATAAAAGTTGATATTCAGACTGGCACAAATGAAGTGCCGCCTGTTGCTAAAATGGAAGGTTTGGATCTAGTAA CTGAAGGTGTTCTTACACTCACAAAAGTTCTTAAGAACATAGATGAGTACTTAGTTAATACACACTTAAAAGAATCTTCT CAGCCTTTTAAGTCTAAAGATGGTGCAACCCGTTTAACAAAAATGTTTATTAAGGATTGCACTCATATAAACTTTTATGT TGGACAGGCTATCAACCCTGCCCATCAAAATCCAGACTTACCAAATCTAGGTATTAAAACTCAGGTTATTAAAAGCATTG CAGAAAGATTAGAAAATATGGGTAAGCAAGTTACTATAGAATATTATTAA
Upstream 100 bases:
>100_bases ACAAGAAATTGCTAGTCTTTTAGGAGAAACTACAGCAGAAACTAAAGTTGCATTAACGGATTTAAAAGATATTGTCATTG AGGAACGGAGGGATGATTAA
Downstream 100 bases:
>100_bases ATTTTAAGGAGGGAAGTTAATATGATAATCAATGTTTGTGTTGGAAGTGCATGTCATTTAAAAGGGGCCTATGATGTTAT CAATAGTATCGAAAAAAAAC
Product: protein serine/threonine phosphatase
Products: NA
Alternate protein names: Stage II Sporulation E Family Protein; Serine Phosphatase; Stage II Sporulation Protein E; Sigma Factor PP2C-Like Phosphatase; Serine/Threonine Specific Protein Phosphatase; Sporulation Domain Protein
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MGFFIDYAYDFINKKNEELCGDNIEVIETEENIIIILSDGLGSGVKANILATMTTKIAGTMLKGGATVYETVETIASTLP VCNVRKLAYSTFAILKISKNGKVHIVEYDNPPVFFIRNGGLVKLNKKEQIIHGKKILESKAQLIKGDSLILVSDGVIHAG VGEVLTLGWKWENVAKYLIKQSKIEECAKVISRRVVDTSNFFFNQRPGDDISVAVVKARETEVLQVFSGPPKNKKDDPIL VQKILQSKGKKIVCGGTAANIVSRETGKDIKVDIQTGTNEVPPVAKMEGLDLVTEGVLTLTKVLKNIDEYLVNTHLKESS QPFKSKDGATRLTKMFIKDCTHINFYVGQAINPAHQNPDLPNLGIKTQVIKSIAERLENMGKQVTIEYY
Sequences:
>Translated_389_residues MGFFIDYAYDFINKKNEELCGDNIEVIETEENIIIILSDGLGSGVKANILATMTTKIAGTMLKGGATVYETVETIASTLP VCNVRKLAYSTFAILKISKNGKVHIVEYDNPPVFFIRNGGLVKLNKKEQIIHGKKILESKAQLIKGDSLILVSDGVIHAG VGEVLTLGWKWENVAKYLIKQSKIEECAKVISRRVVDTSNFFFNQRPGDDISVAVVKARETEVLQVFSGPPKNKKDDPIL VQKILQSKGKKIVCGGTAANIVSRETGKDIKVDIQTGTNEVPPVAKMEGLDLVTEGVLTLTKVLKNIDEYLVNTHLKESS QPFKSKDGATRLTKMFIKDCTHINFYVGQAINPAHQNPDLPNLGIKTQVIKSIAERLENMGKQVTIEYY >Mature_388_residues GFFIDYAYDFINKKNEELCGDNIEVIETEENIIIILSDGLGSGVKANILATMTTKIAGTMLKGGATVYETVETIASTLPV CNVRKLAYSTFAILKISKNGKVHIVEYDNPPVFFIRNGGLVKLNKKEQIIHGKKILESKAQLIKGDSLILVSDGVIHAGV GEVLTLGWKWENVAKYLIKQSKIEECAKVISRRVVDTSNFFFNQRPGDDISVAVVKARETEVLQVFSGPPKNKKDDPILV QKILQSKGKKIVCGGTAANIVSRETGKDIKVDIQTGTNEVPPVAKMEGLDLVTEGVLTLTKVLKNIDEYLVNTHLKESSQ PFKSKDGATRLTKMFIKDCTHINFYVGQAINPAHQNPDLPNLGIKTQVIKSIAERLENMGKQVTIEYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42924; Mature: 42793
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFFIDYAYDFINKKNEELCGDNIEVIETEENIIIILSDGLGSGVKANILATMTTKIAGT CCEEHHHHHHHHCCCCHHHCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHH MLKGGATVYETVETIASTLPVCNVRKLAYSTFAILKISKNGKVHIVEYDNPPVFFIRNGG HHCCCCHHHHHHHHHHHHCCCCHHHHHHHCEEEEEEECCCCCEEEEEECCCCEEEEECCC LVKLNKKEQIIHGKKILESKAQLIKGDSLILVSDGVIHAGVGEVLTLGWKWENVAKYLIK EEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCCHHHEEECCCHHHHHHHHHH QSKIEECAKVISRRVVDTSNFFFNQRPGDDISVAVVKARETEVLQVFSGPPKNKKDDPIL HHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCHHH VQKILQSKGKKIVCGGTAANIVSRETGKDIKVDIQTGTNEVPPVAKMEGLDLVTEGVLTL HHHHHHHCCCEEEECCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHCCCHHHHHHHHHH TKVLKNIDEYLVNTHLKESSQPFKSKDGATRLTKMFIKDCTHINFYVGQAINPAHQNPDL HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCC PNLGIKTQVIKSIAERLENMGKQVTIEYY CCCCHHHHHHHHHHHHHHHCCCEEEEEEC >Mature Secondary Structure GFFIDYAYDFINKKNEELCGDNIEVIETEENIIIILSDGLGSGVKANILATMTTKIAGT CEEHHHHHHHHCCCCHHHCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHH MLKGGATVYETVETIASTLPVCNVRKLAYSTFAILKISKNGKVHIVEYDNPPVFFIRNGG HHCCCCHHHHHHHHHHHHCCCCHHHHHHHCEEEEEEECCCCCEEEEEECCCCEEEEECCC LVKLNKKEQIIHGKKILESKAQLIKGDSLILVSDGVIHAGVGEVLTLGWKWENVAKYLIK EEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCCHHHEEECCCHHHHHHHHHH QSKIEECAKVISRRVVDTSNFFFNQRPGDDISVAVVKARETEVLQVFSGPPKNKKDDPIL HHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCHHH VQKILQSKGKKIVCGGTAANIVSRETGKDIKVDIQTGTNEVPPVAKMEGLDLVTEGVLTL HHHHHHHCCCEEEECCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHCCCHHHHHHHHHH TKVLKNIDEYLVNTHLKESSQPFKSKDGATRLTKMFIKDCTHINFYVGQAINPAHQNPDL HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCC PNLGIKTQVIKSIAERLENMGKQVTIEYY CCCCHHHHHHHHHHHHHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA