Definition Natranaerobius thermophilus JW/NM-WN-LF, complete genome.
Accession NC_010718
Length 3,165,557

Click here to switch to the map view.

The map label for this gene is 188585463

Identifier: 188585463

GI number: 188585463

Start: 874988

End: 876418

Strand: Direct

Name: 188585463

Synonym: Nther_0835

Alternate gene names: NA

Gene position: 874988-876418 (Clockwise)

Preceding gene: 188585462

Following gene: 188585468

Centisome position: 27.64

GC content: 39.34

Gene sequence:

>1431_bases
ATGAAAAGATTTAGTATTCTTTTGCTATCATTGATGCTAATTATGGGAGGACTTTTTGTAGCAGGCTGTGAAACAGAAGA
GGACGTAGCAAAAGAAGATGATGAGGTTGCAGAAGAAGAAAAGGATGAGAAAGAAAAGGATCAAGATGAAACTGTTGATG
AAGAAGAATTAGATGAATTCATGGAAGACGCGGACTTTGAAGACGGCACATATCGAGGTATATTCGCCGATAGAGGAGAC
ATTCATGTTGGCTTACAGTTTACCTTAGAAGACAACAAAATAACTGAAATTAGCCATAGGCACATGTATTACGATGGTAT
AGACTATTTAGATGAAGATATTGATGAAACTTACAAAGGAATCAGAGATCAGCATAAGCAGGCAGTAGAACATTTAGAAG
GTAAAGATGTACGAGAAGCTGTGGCAGACTTATATGAGCCCGGTGACTTTGTGGACGATGTAGATAGCTTTTCAGGAGCG
ACTATTTATTCTCAGAAGGAAGTTTCCGCCATTGTAGATGGCTTGAACCGAGGAGTATATAGATTCAGAGAAGTAGGTGG
CGAAGTGCCGGAGGATTATAGCCCTATTTCTGAAGATGCAGATTTTGAAGATGGAACATATCGAGGTATTTTTGCCGATA
GAGGAGACATTCATGTTGGCTTACAGTTTACCTTAGAAGATAATAAAATAACTGAAATTAGCCATAGGCACATGTATTAC
GATGGTATAGACTATTTAGATGAAGATATTGATGAAACTTACAAAGGAATCAGAGATCAGCACAAGCAGGCAGTAGAACA
TTTAGAAGGTAAAGATGTACGAGAAGCTGTATCAGACTTATATGAGCCCGGTAACTTTGTGGATGATGTAGATAGCTTTT
CAGGAGCGACTATTTATTCCCAGAAGGAAGTTTCCGCCATTGTAGATGGCTTGAACCGAGGAGTATATAGATTCAGAGAA
GTAGGTGGCGAGGTACCGGAGGATTATAGCCCTATTTCTGAAGATGCAGATTTTGAAGATGGAACATATCGAGGTATTTT
TGCCGATAGAGGAGACATTCATGTAGTTTTACAGTTTACTTTAGAAGATAACGAAATAACTGAAATAGGACATAGATACA
TGTATTATGATGGTGTAGATTATTTAGACGAAGATATTGATGAAACTTACAAAGGAATCAGAGATCAGCACAAGCAGGCA
GTAGAACATTTAGAAGGTAAAGATGTACGAGAAGCTGTGGCAGACTTATATGAGCCCGGTGACTTTGTGGACGATGTAGA
TAGCTTTTCAGGAGCGACTATTTATTCTCAGAAGGAAGTTTCCGCCATTGTAGATGGTCTAAACCGAGGAGTATACAGAT
TCAGAGAAGTAGGTGGCGAAGTGCCGGAGGATTATAGTCCTCTAAGAACTAGGCCACAGACTCAGCAGTAA

Upstream 100 bases:

>100_bases
ACCCCTAATATCTGGAATTTATTGACCAATAAAAAGTTTTTATGATATGCTTGTACATATGATATCAATCACAAAAAAAG
ATTTAGGGGGGGGACGAACT

Downstream 100 bases:

>100_bases
TCATTTAAAAATTTATTGATAGCAAAAGCCCGTGCATATAGCACGGGCTTTTTTGCATGGTGTTTAATTAAATTACTATA
GTAGATTAAAATTCTCGATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MKRFSILLLSLMLIMGGLFVAGCETEEDVAKEDDEVAEEEKDEKEKDQDETVDEEELDEFMEDADFEDGTYRGIFADRGD
IHVGLQFTLEDNKITEISHRHMYYDGIDYLDEDIDETYKGIRDQHKQAVEHLEGKDVREAVADLYEPGDFVDDVDSFSGA
TIYSQKEVSAIVDGLNRGVYRFREVGGEVPEDYSPISEDADFEDGTYRGIFADRGDIHVGLQFTLEDNKITEISHRHMYY
DGIDYLDEDIDETYKGIRDQHKQAVEHLEGKDVREAVSDLYEPGNFVDDVDSFSGATIYSQKEVSAIVDGLNRGVYRFRE
VGGEVPEDYSPISEDADFEDGTYRGIFADRGDIHVVLQFTLEDNEITEIGHRYMYYDGVDYLDEDIDETYKGIRDQHKQA
VEHLEGKDVREAVADLYEPGDFVDDVDSFSGATIYSQKEVSAIVDGLNRGVYRFREVGGEVPEDYSPLRTRPQTQQ

Sequences:

>Translated_476_residues
MKRFSILLLSLMLIMGGLFVAGCETEEDVAKEDDEVAEEEKDEKEKDQDETVDEEELDEFMEDADFEDGTYRGIFADRGD
IHVGLQFTLEDNKITEISHRHMYYDGIDYLDEDIDETYKGIRDQHKQAVEHLEGKDVREAVADLYEPGDFVDDVDSFSGA
TIYSQKEVSAIVDGLNRGVYRFREVGGEVPEDYSPISEDADFEDGTYRGIFADRGDIHVGLQFTLEDNKITEISHRHMYY
DGIDYLDEDIDETYKGIRDQHKQAVEHLEGKDVREAVSDLYEPGNFVDDVDSFSGATIYSQKEVSAIVDGLNRGVYRFRE
VGGEVPEDYSPISEDADFEDGTYRGIFADRGDIHVVLQFTLEDNEITEIGHRYMYYDGVDYLDEDIDETYKGIRDQHKQA
VEHLEGKDVREAVADLYEPGDFVDDVDSFSGATIYSQKEVSAIVDGLNRGVYRFREVGGEVPEDYSPLRTRPQTQQ
>Mature_476_residues
MKRFSILLLSLMLIMGGLFVAGCETEEDVAKEDDEVAEEEKDEKEKDQDETVDEEELDEFMEDADFEDGTYRGIFADRGD
IHVGLQFTLEDNKITEISHRHMYYDGIDYLDEDIDETYKGIRDQHKQAVEHLEGKDVREAVADLYEPGDFVDDVDSFSGA
TIYSQKEVSAIVDGLNRGVYRFREVGGEVPEDYSPISEDADFEDGTYRGIFADRGDIHVGLQFTLEDNKITEISHRHMYY
DGIDYLDEDIDETYKGIRDQHKQAVEHLEGKDVREAVSDLYEPGNFVDDVDSFSGATIYSQKEVSAIVDGLNRGVYRFRE
VGGEVPEDYSPISEDADFEDGTYRGIFADRGDIHVVLQFTLEDNEITEIGHRYMYYDGVDYLDEDIDETYKGIRDQHKQA
VEHLEGKDVREAVADLYEPGDFVDDVDSFSGATIYSQKEVSAIVDGLNRGVYRFREVGGEVPEDYSPLRTRPQTQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54362; Mature: 54362

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFSILLLSLMLIMGGLFVAGCETEEDVAKEDDEVAEEEKDEKEKDQDETVDEEELDEF
CCHHHHHHHHHHHHHCCCEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
MEDADFEDGTYRGIFADRGDIHVGLQFTLEDNKITEISHRHMYYDGIDYLDEDIDETYKG
HHHCCCCCCCEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHEECCHHHHHHHHHHHHHH
IRDQHKQAVEHLEGKDVREAVADLYEPGDFVDDVDSFSGATIYSQKEVSAIVDGLNRGVY
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHCCCCCEEECHHHHHHHHHHHHHHHH
RFREVGGEVPEDYSPISEDADFEDGTYRGIFADRGDIHVGLQFTLEDNKITEISHRHMYY
HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHEE
DGIDYLDEDIDETYKGIRDQHKQAVEHLEGKDVREAVSDLYEPGNFVDDVDSFSGATIYS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHCCCCCEEEC
QKEVSAIVDGLNRGVYRFREVGGEVPEDYSPISEDADFEDGTYRGIFADRGDIHVVLQFT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEE
LEDNEITEIGHRYMYYDGVDYLDEDIDETYKGIRDQHKQAVEHLEGKDVREAVADLYEPG
ECCCHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
DFVDDVDSFSGATIYSQKEVSAIVDGLNRGVYRFREVGGEVPEDYSPLRTRPQTQQ
CHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRFSILLLSLMLIMGGLFVAGCETEEDVAKEDDEVAEEEKDEKEKDQDETVDEEELDEF
CCHHHHHHHHHHHHHCCCEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
MEDADFEDGTYRGIFADRGDIHVGLQFTLEDNKITEISHRHMYYDGIDYLDEDIDETYKG
HHHCCCCCCCEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHEECCHHHHHHHHHHHHHH
IRDQHKQAVEHLEGKDVREAVADLYEPGDFVDDVDSFSGATIYSQKEVSAIVDGLNRGVY
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHCCCCCEEECHHHHHHHHHHHHHHHH
RFREVGGEVPEDYSPISEDADFEDGTYRGIFADRGDIHVGLQFTLEDNKITEISHRHMYY
HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHEE
DGIDYLDEDIDETYKGIRDQHKQAVEHLEGKDVREAVSDLYEPGNFVDDVDSFSGATIYS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHCCCCCEEEC
QKEVSAIVDGLNRGVYRFREVGGEVPEDYSPISEDADFEDGTYRGIFADRGDIHVVLQFT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEE
LEDNEITEIGHRYMYYDGVDYLDEDIDETYKGIRDQHKQAVEHLEGKDVREAVADLYEPG
ECCCHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
DFVDDVDSFSGATIYSQKEVSAIVDGLNRGVYRFREVGGEVPEDYSPLRTRPQTQQ
CHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA