| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is yxjM [H]
Identifier: 188585381
GI number: 188585381
Start: 776574
End: 777755
Strand: Reverse
Name: yxjM [H]
Synonym: Nther_0748
Alternate gene names: 188585381
Gene position: 777755-776574 (Counterclockwise)
Preceding gene: 188585390
Following gene: 188585380
Centisome position: 24.57
GC content: 32.57
Gene sequence:
>1182_bases TTGGATCAGAGAACTAAAAATATTTCTGATATTTTAACTTTGATAGGTTTCCTATTTGCTTTTTTAGGTACTATTACTCA AAGCCCAGAACATCAAATAGAAATTTTGATACTATCATTTTTGTTAGCGAGTTCATTTCTGGCACGAAGCTATACCGTAT CTGACAAAATTCAGGTTATTCATAGATATGAAGTCCCCTTAATCATTTTTGAAATTATGATTGTTACGATAATTATGTAT TTTGACCAGTCAGGTGCTTCACAAATATATTATTTCATCCTGATAGCTGATGCTGTGTTGTATTTTTCTATAAAGTTTGC TTTAAGCCTTACTTTGCTAATTTTTTTGGCTTTTATGATAAATGCTTGGATAGCCCTCTGGCCTGAAATGACTTTAAATG ACATTTTAGTAATCGGTTTATTAAATGGTATTGGATATATTTTTGTTTTTTTAATTACTTATTTAGTCAAACATCAAGTT AATCAAAGGAATTTTATTAATGAAACCTTGAAAGAATTAGAGTATAAAAATAAGAAACTGGAAGAAAGCCAAAAACAGTT AGAAAATATGGCAGTTATCAAAGAAAGAAATAGAATTGCCCATGATATCCATGACACCGTCGGTCACACCCTGACAACGG TACTAGTTGGAACTGAAGCCGCAAAGCGCTTAATAGATAAAGATCCGGAATTAGCTAAGGAAAAGCTGTCACTAGCCCAG GATCAAGTGAGAAAAGGATTGAATAATATTAAAAATTCCATAAAAGATATTAAAGATCATAATGAAATCATTGATTTTAA TAGTGCAGTTAATAATCTTATCCATGAGACCGAGCAACAAACAGACATAGAGATTGATTGCCATATTTCTGTCTCAGAAG ATCAAATCAGTCAAACTAAACAAAAGGTAATTTTGAGGGCACTACAGGAAGGGTTAACAAATGGGATTAAACACGGGAAC AGCACATATTTCAAATTCAATCTAATAGAAGATCAGGAATATATTTATTTTGACCTAGAAGATAACGGTACGGGAAGTGA AGATAAAGATATGGGCTTTGGCCTCAATTTTATGAAAGACAGAGTAGAAGAATTAGGAGGCAGCCTTACAGCGAATTCCA AACAAGATGGTGGTTTTATACTGTCTATTGAAATCCCGGTAGAAGAAGGTGAGGAATTATGA
Upstream 100 bases:
>100_bases CTCTAGTCATTATTATTTTTTACTATAAGGTATAACTTTACATTCTAAAAAAGGATATCAATTAATACTAGGCGAATTAA CTATTAGAGGAGTGGTGAAT
Downstream 100 bases:
>100_bases GTAAAATTAAAGTGATGATAGCAGATGACCAAACTATTCTTGCCGATAGCTTAAAAACAATTATAGACCTAGAAGATGAT ATGGAGGTTGTGGCGGTTTC
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MDQRTKNISDILTLIGFLFAFLGTITQSPEHQIEILILSFLLASSFLARSYTVSDKIQVIHRYEVPLIIFEIMIVTIIMY FDQSGASQIYYFILIADAVLYFSIKFALSLTLLIFLAFMINAWIALWPEMTLNDILVIGLLNGIGYIFVFLITYLVKHQV NQRNFINETLKELEYKNKKLEESQKQLENMAVIKERNRIAHDIHDTVGHTLTTVLVGTEAAKRLIDKDPELAKEKLSLAQ DQVRKGLNNIKNSIKDIKDHNEIIDFNSAVNNLIHETEQQTDIEIDCHISVSEDQISQTKQKVILRALQEGLTNGIKHGN STYFKFNLIEDQEYIYFDLEDNGTGSEDKDMGFGLNFMKDRVEELGGSLTANSKQDGGFILSIEIPVEEGEEL
Sequences:
>Translated_393_residues MDQRTKNISDILTLIGFLFAFLGTITQSPEHQIEILILSFLLASSFLARSYTVSDKIQVIHRYEVPLIIFEIMIVTIIMY FDQSGASQIYYFILIADAVLYFSIKFALSLTLLIFLAFMINAWIALWPEMTLNDILVIGLLNGIGYIFVFLITYLVKHQV NQRNFINETLKELEYKNKKLEESQKQLENMAVIKERNRIAHDIHDTVGHTLTTVLVGTEAAKRLIDKDPELAKEKLSLAQ DQVRKGLNNIKNSIKDIKDHNEIIDFNSAVNNLIHETEQQTDIEIDCHISVSEDQISQTKQKVILRALQEGLTNGIKHGN STYFKFNLIEDQEYIYFDLEDNGTGSEDKDMGFGLNFMKDRVEELGGSLTANSKQDGGFILSIEIPVEEGEEL >Mature_393_residues MDQRTKNISDILTLIGFLFAFLGTITQSPEHQIEILILSFLLASSFLARSYTVSDKIQVIHRYEVPLIIFEIMIVTIIMY FDQSGASQIYYFILIADAVLYFSIKFALSLTLLIFLAFMINAWIALWPEMTLNDILVIGLLNGIGYIFVFLITYLVKHQV NQRNFINETLKELEYKNKKLEESQKQLENMAVIKERNRIAHDIHDTVGHTLTTVLVGTEAAKRLIDKDPELAKEKLSLAQ DQVRKGLNNIKNSIKDIKDHNEIIDFNSAVNNLIHETEQQTDIEIDCHISVSEDQISQTKQKVILRALQEGLTNGIKHGN STYFKFNLIEDQEYIYFDLEDNGTGSEDKDMGFGLNFMKDRVEELGGSLTANSKQDGGFILSIEIPVEEGEEL
Specific function: Probable member of the two-component regulatory system yxjM/yxjL. May activate yxjL by phosphorylation [H]
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788812, Length=225, Percent_Identity=25.3333333333333, Blast_Score=81, Evalue=9e-17, Organism=Escherichia coli, GI87082311, Length=230, Percent_Identity=25.2173913043478, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011712 [H]
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 44853; Mature: 44853
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQRTKNISDILTLIGFLFAFLGTITQSPEHQIEILILSFLLASSFLARSYTVSDKIQVI CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH HRYEVPLIIFEIMIVTIIMYFDQSGASQIYYFILIADAVLYFSIKFALSLTLLIFLAFMI HHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NAWIALWPEMTLNDILVIGLLNGIGYIFVFLITYLVKHQVNQRNFINETLKELEYKNKKL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH EESQKQLENMAVIKERNRIAHDIHDTVGHTLTTVLVGTEAAKRLIDKDPELAKEKLSLAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DQVRKGLNNIKNSIKDIKDHNEIIDFNSAVNNLIHETEQQTDIEIDCHISVSEDQISQTK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHH QKVILRALQEGLTNGIKHGNSTYFKFNLIEDQEYIYFDLEDNGTGSEDKDMGFGLNFMKD HHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCHHHHHH RVEELGGSLTANSKQDGGFILSIEIPVEEGEEL HHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCC >Mature Secondary Structure MDQRTKNISDILTLIGFLFAFLGTITQSPEHQIEILILSFLLASSFLARSYTVSDKIQVI CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH HRYEVPLIIFEIMIVTIIMYFDQSGASQIYYFILIADAVLYFSIKFALSLTLLIFLAFMI HHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NAWIALWPEMTLNDILVIGLLNGIGYIFVFLITYLVKHQVNQRNFINETLKELEYKNKKL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH EESQKQLENMAVIKERNRIAHDIHDTVGHTLTTVLVGTEAAKRLIDKDPELAKEKLSLAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DQVRKGLNNIKNSIKDIKDHNEIIDFNSAVNNLIHETEQQTDIEIDCHISVSEDQISQTK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHH QKVILRALQEGLTNGIKHGNSTYFKFNLIEDQEYIYFDLEDNGTGSEDKDMGFGLNFMKD HHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCHHHHHH RVEELGGSLTANSKQDGGFILSIEIPVEEGEEL HHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8978088; 8969509; 9384377 [H]