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The map label for this gene is ykjA [H]

Identifier: 188585346

GI number: 188585346

Start: 736927

End: 737673

Strand: Reverse

Name: ykjA [H]

Synonym: Nther_0711

Alternate gene names: 188585346

Gene position: 737673-736927 (Counterclockwise)

Preceding gene: 188585348

Following gene: 188585341

Centisome position: 23.3

GC content: 34.81

Gene sequence:

>747_bases
ATGGAAGTAGTAATCAGGGCGTTAATCATTTATCCATGGACTGTGATAATTTTCAGGTTCATGGGTAAAGGAATCACCTT
TCAACAAAAACCTTATGACTTTATGGTTATGATGTTGATAGGTTCATCTGCGGCAGCACTAATAGTCAATAGAGATGTGC
CTATAATCAATTCTTTAGTGGCATTAGCGGCATTAGGAATATTGCATACCATCATAAGTACTGCTACTCTCAGTAACAAA
TTAAAATATTACATTGGGGGTCGTCCTGATATTCTAATCAGGAATGGACGAATTGTGAAAGAAAACCTTATCAAAAACCA
AGTAAATTTGGATCAGTTATTAGCAGCTTTAAGGAATCAAGGATATAGAAGAATTCATGATATTGAATTTGCCGTGTTAG
AAGCCAATGGCCAGATGTCAGTCATCCCAAAATCTCAATACAGACCGATTAATCCTAATGATTTATCTCTCAATACAATA
TATGAGGGAATCCCCACACCTCTGATTTTAGATGGTCAAATTATATTAAAAAATTTGGAAGAGATCGGATTAGATATAAA
ATGGCTAAAAAACAAACTTTCGGATCGAGGTATTACTGATCCCGATTATGTGTTATTGGCGTTAATCGATACTGACGGAA
GTTTATATATATCGGAACAACCAGATATTGAACCTATAAGATCCTTCTTTATTGGAGAAGGAAAAGATAAAATACAAGGA
AAAAACCCGGATAACAATCTGGGATGA

Upstream 100 bases:

>100_bases
AATTTTACAGTACAACAACTAAATATACCAGAGCATAATTAATAAGAAAAATTTAAAAAACCAATACTAAAATCACATAA
TTTAACAAAGGAGCATGGTT

Downstream 100 bases:

>100_bases
TCTGACAACTAGGGAATGAATAATAACTAAAATGGGATTAATTTATTGAAACAAAAGGATTATCTCGGATATAAAACCTC
CAGAGTTTGTCTGTATATTC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MEVVIRALIIYPWTVIIFRFMGKGITFQQKPYDFMVMMLIGSSAAALIVNRDVPIINSLVALAALGILHTIISTATLSNK
LKYYIGGRPDILIRNGRIVKENLIKNQVNLDQLLAALRNQGYRRIHDIEFAVLEANGQMSVIPKSQYRPINPNDLSLNTI
YEGIPTPLILDGQIILKNLEEIGLDIKWLKNKLSDRGITDPDYVLLALIDTDGSLYISEQPDIEPIRSFFIGEGKDKIQG
KNPDNNLG

Sequences:

>Translated_248_residues
MEVVIRALIIYPWTVIIFRFMGKGITFQQKPYDFMVMMLIGSSAAALIVNRDVPIINSLVALAALGILHTIISTATLSNK
LKYYIGGRPDILIRNGRIVKENLIKNQVNLDQLLAALRNQGYRRIHDIEFAVLEANGQMSVIPKSQYRPINPNDLSLNTI
YEGIPTPLILDGQIILKNLEEIGLDIKWLKNKLSDRGITDPDYVLLALIDTDGSLYISEQPDIEPIRSFFIGEGKDKIQG
KNPDNNLG
>Mature_248_residues
MEVVIRALIIYPWTVIIFRFMGKGITFQQKPYDFMVMMLIGSSAAALIVNRDVPIINSLVALAALGILHTIISTATLSNK
LKYYIGGRPDILIRNGRIVKENLIKNQVNLDQLLAALRNQGYRRIHDIEFAVLEANGQMSVIPKSQYRPINPNDLSLNTI
YEGIPTPLILDGQIILKNLEEIGLDIKWLKNKLSDRGITDPDYVLLALIDTDGSLYISEQPDIEPIRSFFIGEGKDKIQG
KNPDNNLG

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

Organism=Escherichia coli, GI1787135, Length=141, Percent_Identity=24.113475177305, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 27800; Mature: 27800

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVVIRALIIYPWTVIIFRFMGKGITFQQKPYDFMVMMLIGSSAAALIVNRDVPIINSLV
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEECCCCCEEEEEECCCHHHHHHH
ALAALGILHTIISTATLSNKLKYYIGGRPDILIRNGRIVKENLIKNQVNLDQLLAALRNQ
HHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECCEEHHHHHHHCCCCHHHHHHHHHHC
GYRRIHDIEFAVLEANGQMSVIPKSQYRPINPNDLSLNTIYEGIPTPLILDGQIILKNLE
CCCEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCEEECCHHHHHHHH
EIGLDIKWLKNKLSDRGITDPDYVLLALIDTDGSLYISEQPDIEPIRSFFIGEGKDKIQG
HHCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEECCCCCHHHHHHHHHCCCHHHCCC
KNPDNNLG
CCCCCCCC
>Mature Secondary Structure
MEVVIRALIIYPWTVIIFRFMGKGITFQQKPYDFMVMMLIGSSAAALIVNRDVPIINSLV
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEECCCCCEEEEEECCCHHHHHHH
ALAALGILHTIISTATLSNKLKYYIGGRPDILIRNGRIVKENLIKNQVNLDQLLAALRNQ
HHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECCEEHHHHHHHCCCCHHHHHHHHHHC
GYRRIHDIEFAVLEANGQMSVIPKSQYRPINPNDLSLNTIYEGIPTPLILDGQIILKNLE
CCCEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCEEECCHHHHHHHH
EIGLDIKWLKNKLSDRGITDPDYVLLALIDTDGSLYISEQPDIEPIRSFFIGEGKDKIQG
HHCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEECCCCCHHHHHHHHHCCCHHHCCC
KNPDNNLG
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8682784; 9384377 [H]