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The map label for this gene is gerKB [H]

Identifier: 188585241

GI number: 188585241

Start: 627360

End: 628451

Strand: Reverse

Name: gerKB [H]

Synonym: Nther_0603

Alternate gene names: 188585241

Gene position: 628451-627360 (Counterclockwise)

Preceding gene: 188585242

Following gene: 188585240

Centisome position: 19.85

GC content: 36.72

Gene sequence:

>1092_bases
GTGCTGCAAGAAAAAATAGCTAATAGACAATTACTGTTTATGATTTTTCTAGTACGAGCAACAATTGCTATAGCATTTTT
ACCTGTGTTAACAACTGGAAATGCCGGACAAGATGCTTGGCTGGCTACAATTATTATGACATTTACAACGGTTGCTCTGA
TATTTTTAGTAGTGGGGCTAGGAATTAAGTTCCCCGAGCAAACCATTGTAGAATACAGCCAGGATTTACTGGGAAAATAT
CCGGGAAAACTAATAACTTTATTAATACTTTGGTTCTTTCTACACATGGCAGCTACTGAAGTGAGAATTTATGGGGAATT
ATTGAATATAGCTTTTTTACCCAGAACTCCACTGGTTTTTGTAATTGGAGCCATGGTGTTTTTAGCTGCTATTACTGTAT
ATATAGGAGTAGAAGTTTTAGGAAGAATGGCGGATCTATTATTTCCCTTTTACATATTCTTAATTGGTATTTCCATATTA
TTGCCGTTGCCAGAACTAGTACCAGAAAACTTTGAACCAGTACTAGCTGGTGGGCTAACTCAAGTAATGAGTTCAGCTCT
AACCCCTACAGCTATAGGAAGCCAGGTTTTGGTCGTCACAATTTTGCTTCCCAGAGTTGTCGAACCAAAAAAGGGAATAA
AGACAATAATAGTAGCTTTTACTGCAGCAAATCTATTGGTACTGTTAATCTCCATAGCAGTAATTGGAAAACTTGGATCA
GTTGAAGGAGCAAAGGCAGTTTTTCCTTTCTTACTCACAATTAGAGCTTTAGAGCTCAGTGAATATATAGAAAGGTTGGA
AATTTTTGCAGTCCTGGCCTGGGGAATGGGAATATATATATCACTATCTGTATATTTATACTGTGGAGCAAAAGGACTTT
CACAGTGGTTTGGTCTCAGGGATTATCGCCCTTTAACTTTTCCAATGGCTATTGTATGGGTAGTTATGGCTATGCATTCC
TTTGAAAGTATTTTTCAGATTAGAAATTTCTTTGCTCCTGAAGTTTTCTTTCCATATGCTATGACAGGGTTTTTACCCTT
TATATTGTTGTGGGTCAGTTACGTATTTAAAAAACTAACCAAATCGAACTGA

Upstream 100 bases:

>100_bases
AGTCCACCCCAAGGCTTAGAAACAAGTGAAGATCAAGATCATGAAGAACAACCTGAAGTAGAAAATGATAGTGATAGCAA
GGATAGTTAGGGGGAAAATT

Downstream 100 bases:

>100_bases
TTGGAGAACTGTAAAATGAAACTTATAAACAATAATCTTTCTAAACAAAACAAAAAAAGCTCTAAACTAGTCATTTTGAT
GACAATAATAACTGTAATTC

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MLQEKIANRQLLFMIFLVRATIAIAFLPVLTTGNAGQDAWLATIIMTFTTVALIFLVVGLGIKFPEQTIVEYSQDLLGKY
PGKLITLLILWFFLHMAATEVRIYGELLNIAFLPRTPLVFVIGAMVFLAAITVYIGVEVLGRMADLLFPFYIFLIGISIL
LPLPELVPENFEPVLAGGLTQVMSSALTPTAIGSQVLVVTILLPRVVEPKKGIKTIIVAFTAANLLVLLISIAVIGKLGS
VEGAKAVFPFLLTIRALELSEYIERLEIFAVLAWGMGIYISLSVYLYCGAKGLSQWFGLRDYRPLTFPMAIVWVVMAMHS
FESIFQIRNFFAPEVFFPYAMTGFLPFILLWVSYVFKKLTKSN

Sequences:

>Translated_363_residues
MLQEKIANRQLLFMIFLVRATIAIAFLPVLTTGNAGQDAWLATIIMTFTTVALIFLVVGLGIKFPEQTIVEYSQDLLGKY
PGKLITLLILWFFLHMAATEVRIYGELLNIAFLPRTPLVFVIGAMVFLAAITVYIGVEVLGRMADLLFPFYIFLIGISIL
LPLPELVPENFEPVLAGGLTQVMSSALTPTAIGSQVLVVTILLPRVVEPKKGIKTIIVAFTAANLLVLLISIAVIGKLGS
VEGAKAVFPFLLTIRALELSEYIERLEIFAVLAWGMGIYISLSVYLYCGAKGLSQWFGLRDYRPLTFPMAIVWVVMAMHS
FESIFQIRNFFAPEVFFPYAMTGFLPFILLWVSYVFKKLTKSN
>Mature_363_residues
MLQEKIANRQLLFMIFLVRATIAIAFLPVLTTGNAGQDAWLATIIMTFTTVALIFLVVGLGIKFPEQTIVEYSQDLLGKY
PGKLITLLILWFFLHMAATEVRIYGELLNIAFLPRTPLVFVIGAMVFLAAITVYIGVEVLGRMADLLFPFYIFLIGISIL
LPLPELVPENFEPVLAGGLTQVMSSALTPTAIGSQVLVVTILLPRVVEPKKGIKTIIVAFTAANLLVLLISIAVIGKLGS
VEGAKAVFPFLLTIRALELSEYIERLEIFAVLAWGMGIYISLSVYLYCGAKGLSQWFGLRDYRPLTFPMAIVWVVMAMHS
FESIFQIRNFFAPEVFFPYAMTGFLPFILLWVSYVFKKLTKSN

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 40366; Mature: 40366

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQEKIANRQLLFMIFLVRATIAIAFLPVLTTGNAGQDAWLATIIMTFTTVALIFLVVGL
CCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GIKFPEQTIVEYSQDLLGKYPGKLITLLILWFFLHMAATEVRIYGELLNIAFLPRTPLVF
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VIGAMVFLAAITVYIGVEVLGRMADLLFPFYIFLIGISILLPLPELVPENFEPVLAGGLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHH
QVMSSALTPTAIGSQVLVVTILLPRVVEPKKGIKTIIVAFTAANLLVLLISIAVIGKLGS
HHHHHCCCCHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VEGAKAVFPFLLTIRALELSEYIERLEIFAVLAWGMGIYISLSVYLYCGAKGLSQWFGLR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
DYRPLTFPMAIVWVVMAMHSFESIFQIRNFFAPEVFFPYAMTGFLPFILLWVSYVFKKLT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSN
CCC
>Mature Secondary Structure
MLQEKIANRQLLFMIFLVRATIAIAFLPVLTTGNAGQDAWLATIIMTFTTVALIFLVVGL
CCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GIKFPEQTIVEYSQDLLGKYPGKLITLLILWFFLHMAATEVRIYGELLNIAFLPRTPLVF
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VIGAMVFLAAITVYIGVEVLGRMADLLFPFYIFLIGISILLPLPELVPENFEPVLAGGLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHH
QVMSSALTPTAIGSQVLVVTILLPRVVEPKKGIKTIIVAFTAANLLVLLISIAVIGKLGS
HHHHHCCCCHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VEGAKAVFPFLLTIRALELSEYIERLEIFAVLAWGMGIYISLSVYLYCGAKGLSQWFGLR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
DYRPLTFPMAIVWVVMAMHSFESIFQIRNFFAPEVFFPYAMTGFLPFILLWVSYVFKKLT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSN
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]