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The map label for this gene is glgA

Identifier: 188585198

GI number: 188585198

Start: 586014

End: 587504

Strand: Reverse

Name: glgA

Synonym: Nther_0559

Alternate gene names: 188585198

Gene position: 587504-586014 (Counterclockwise)

Preceding gene: 188585199

Following gene: 188585197

Centisome position: 18.56

GC content: 34.21

Gene sequence:

>1491_bases
ATGAAGGTATTAGTTGCAACAGCTGAGGCAAGTCCCTTCGCAAAACGCGGTGGCTTAGGGGATGTTCTGGGAGCACTCCC
CATTGCTATCAAAAAACAATCAGAGATAGACATCAGGGTTGTATTACCCGGATATTCTGCAATACCAAGCCAATTTAAAA
GTGAATTTCAACCAATTGATTCCATTATTATACCTCTAGGATGGAGAGCCCAAAAAAGTAGAGTCTCTAGCTACAATTTT
CGCAATGTCACCTTTTATTTTATAGAAAACGATTATTACTTTAATCGTGAAGATATTTATGGATATTTTGATGAAGCAGA
GCAATTTGGTTTCTTTTCTAAGGCTATTTTAGATATTATGCCCCTTTTAGACTTTTATCCAGATATTATACATTTGAATG
ACTGGCATACGGCCATGGTTAGTCCCTTGTTAAAATACAAATACGCTCATAAAACTAATTATAATCAGATGAAAACGATA
TTGACAATCCACAATTTAAAATATCAAGGGATTTTTACACCACATGTACTAGAGGATTTTTTTGATTTACATGACCACAA
ATTACAACATGATCCCGAGTATTTGGAATACCATGGCCAAATCAGTTTCTTAAAGGGTGGTTTGATTTTCTCCGATGCCA
TTACTACTGTTAGTCCCACTTATGCAAAAGAAATTCAAAGCCCTGAATTAGGTATGGGAGTAGATGGTCTTCTTCACAAA
CGAAGAGATGATTTATACGGTATCTTAAATGGTATCGATTATCAGGACTACAATCCAAAAACTGATGTTAATATTTACCG
TAATTATAATCTCCCTGATGAAGGCAAAACTAATGAAAAACTAATTAATAAACTCAGACTCCAGGAAGATTTGAGGTTAC
CTGTAAGTTCTCGTGTTCCTTTGATAGCATTTATTAACCGCTTGGTAAAACAAAAAGGATTGGATTTAATAACTTATGTT
TTACCTGAGTTATTAGAATCAGAAGAGGTCCAATTTGTATTTCTAGGAACAGGAGATCCTCATTACGAACAGTATCTTAG
TTATTTAGCCGAAAAACATCAAAATTTATCTGCTCAAATTAAGTTTGATGAAGGTTTGGCCAGAAAAATATACGCCGCAT
CTGATTTATTTTTAATGCCATCTTTATTTGAACCTTGTGGAATAGGACAACAAATTGCTATTCGTTATGGCAGTGTTCCC
ATTGTTAGAAAAGTGGGCGGTTTACATGATACGGTTTATCCGTCAATTTCAGAAGAAGGTACAAGAGGTATTGGTTTCAC
TTTCGAATCATTTAACGCCCATGAAATGCTATTTACCATTAAAGAAGCAATACAATATTATCACCAAAAAGCTTTTTGGC
AGGAAATCATAAATAATTTGACAACAATTGATTTTAGTTGGGAAAAATCTGCCTGTGAATATATCGAATTGTATCACAAA
CTTATACATAGAAACACAAACAGCACCAGAAAGGAGAGTTATCTTAAATAA

Upstream 100 bases:

>100_bases
AAGCCTCTAGTTTTATCAAAACAAGCGCGAGTTTAATAATAGGCGCTGCTATATTTAGTGTTGATACTTAAAATAATTCA
TCCAAGGGGAGGACTAAACA

Downstream 100 bases:

>100_bases
TGTTTGAATCAAGGGATAAATTCAAAAGAGAATTTAAGGAAAAATTACGTAAAGAACGAGGTAAAGCTATCGATAACGCA
AGTTATTTGGATCTATATAA

Product: glycogen/starch synthase, ADP-glucose type

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MKVLVATAEASPFAKRGGLGDVLGALPIAIKKQSEIDIRVVLPGYSAIPSQFKSEFQPIDSIIIPLGWRAQKSRVSSYNF
RNVTFYFIENDYYFNREDIYGYFDEAEQFGFFSKAILDIMPLLDFYPDIIHLNDWHTAMVSPLLKYKYAHKTNYNQMKTI
LTIHNLKYQGIFTPHVLEDFFDLHDHKLQHDPEYLEYHGQISFLKGGLIFSDAITTVSPTYAKEIQSPELGMGVDGLLHK
RRDDLYGILNGIDYQDYNPKTDVNIYRNYNLPDEGKTNEKLINKLRLQEDLRLPVSSRVPLIAFINRLVKQKGLDLITYV
LPELLESEEVQFVFLGTGDPHYEQYLSYLAEKHQNLSAQIKFDEGLARKIYAASDLFLMPSLFEPCGIGQQIAIRYGSVP
IVRKVGGLHDTVYPSISEEGTRGIGFTFESFNAHEMLFTIKEAIQYYHQKAFWQEIINNLTTIDFSWEKSACEYIELYHK
LIHRNTNSTRKESYLK

Sequences:

>Translated_496_residues
MKVLVATAEASPFAKRGGLGDVLGALPIAIKKQSEIDIRVVLPGYSAIPSQFKSEFQPIDSIIIPLGWRAQKSRVSSYNF
RNVTFYFIENDYYFNREDIYGYFDEAEQFGFFSKAILDIMPLLDFYPDIIHLNDWHTAMVSPLLKYKYAHKTNYNQMKTI
LTIHNLKYQGIFTPHVLEDFFDLHDHKLQHDPEYLEYHGQISFLKGGLIFSDAITTVSPTYAKEIQSPELGMGVDGLLHK
RRDDLYGILNGIDYQDYNPKTDVNIYRNYNLPDEGKTNEKLINKLRLQEDLRLPVSSRVPLIAFINRLVKQKGLDLITYV
LPELLESEEVQFVFLGTGDPHYEQYLSYLAEKHQNLSAQIKFDEGLARKIYAASDLFLMPSLFEPCGIGQQIAIRYGSVP
IVRKVGGLHDTVYPSISEEGTRGIGFTFESFNAHEMLFTIKEAIQYYHQKAFWQEIINNLTTIDFSWEKSACEYIELYHK
LIHRNTNSTRKESYLK
>Mature_496_residues
MKVLVATAEASPFAKRGGLGDVLGALPIAIKKQSEIDIRVVLPGYSAIPSQFKSEFQPIDSIIIPLGWRAQKSRVSSYNF
RNVTFYFIENDYYFNREDIYGYFDEAEQFGFFSKAILDIMPLLDFYPDIIHLNDWHTAMVSPLLKYKYAHKTNYNQMKTI
LTIHNLKYQGIFTPHVLEDFFDLHDHKLQHDPEYLEYHGQISFLKGGLIFSDAITTVSPTYAKEIQSPELGMGVDGLLHK
RRDDLYGILNGIDYQDYNPKTDVNIYRNYNLPDEGKTNEKLINKLRLQEDLRLPVSSRVPLIAFINRLVKQKGLDLITYV
LPELLESEEVQFVFLGTGDPHYEQYLSYLAEKHQNLSAQIKFDEGLARKIYAASDLFLMPSLFEPCGIGQQIAIRYGSVP
IVRKVGGLHDTVYPSISEEGTRGIGFTFESFNAHEMLFTIKEAIQYYHQKAFWQEIINNLTTIDFSWEKSACEYIELYHK
LIHRNTNSTRKESYLK

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily

Homologues:

Organism=Escherichia coli, GI1789836, Length=506, Percent_Identity=34.9802371541502, Blast_Score=284, Evalue=1e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGA_NATTJ (B2A6E4)

Other databases:

- EMBL:   CP001034
- RefSeq:   YP_001916743.1
- ProteinModelPortal:   B2A6E4
- SMR:   B2A6E4
- GeneID:   6314669
- GenomeReviews:   CP001034_GR
- KEGG:   nth:Nther_0559
- HOGENOM:   HBG596384
- OMA:   SIHNLLF
- HAMAP:   MF_00484
- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534
- TIGRFAMs:   TIGR02095

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1

EC number: =2.4.1.21

Molecular weight: Translated: 57309; Mature: 57309

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: BINDING 15-15

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVATAEASPFAKRGGLGDVLGALPIAIKKQSEIDIRVVLPGYSAIPSQFKSEFQPID
CEEEEEECCCCCHHHCCCCHHHHHHCCCEEECCCCCEEEEEECCCHHCHHHHHHHHCCCH
SIIIPLGWRAQKSRVSSYNFRNVTFYFIENDYYFNREDIYGYFDEAEQFGFFSKAILDIM
HEEECCCCCHHHHHHCCCCCCEEEEEEEECCEEECHHHHCCCHHHHHHHHHHHHHHHHHH
PLLDFYPDIIHLNDWHTAMVSPLLKYKYAHKTNYNQMKTILTIHNLKYQGIFTPHVLEDF
HHHHHCCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHEEEEECEEECCCCCHHHHHHH
FDLHDHKLQHDPEYLEYHGQISFLKGGLIFSDAITTVSPTYAKEIQSPELGMGVDGLLHK
HHHHHHHCCCCCHHHHHCCEEEEEECCEEEECHHHHCCCHHHHHCCCCCCCCCHHHHHHH
RRDDLYGILNGIDYQDYNPKTDVNIYRNYNLPDEGKTNEKLINKLRLQEDLRLPVSSRVP
HHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
LIAFINRLVKQKGLDLITYVLPELLESEEVQFVFLGTGDPHYEQYLSYLAEKHQNLSAQI
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEE
KFDEGLARKIYAASDLFLMPSLFEPCGIGQQIAIRYGSVPIVRKVGGLHDTVYPSISEEG
EECCCHHHHHHHHCCHHCCHHHCCCCCCCCEEEEEECCCHHHHHHCCCCHHCCCCCCCCC
TRGIGFTFESFNAHEMLFTIKEAIQYYHQKAFWQEIINNLTTIDFSWEKSACEYIELYHK
CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHH
LIHRNTNSTRKESYLK
HHHCCCCCHHHHHCCC
>Mature Secondary Structure
MKVLVATAEASPFAKRGGLGDVLGALPIAIKKQSEIDIRVVLPGYSAIPSQFKSEFQPID
CEEEEEECCCCCHHHCCCCHHHHHHCCCEEECCCCCEEEEEECCCHHCHHHHHHHHCCCH
SIIIPLGWRAQKSRVSSYNFRNVTFYFIENDYYFNREDIYGYFDEAEQFGFFSKAILDIM
HEEECCCCCHHHHHHCCCCCCEEEEEEEECCEEECHHHHCCCHHHHHHHHHHHHHHHHHH
PLLDFYPDIIHLNDWHTAMVSPLLKYKYAHKTNYNQMKTILTIHNLKYQGIFTPHVLEDF
HHHHHCCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHEEEEECEEECCCCCHHHHHHH
FDLHDHKLQHDPEYLEYHGQISFLKGGLIFSDAITTVSPTYAKEIQSPELGMGVDGLLHK
HHHHHHHCCCCCHHHHHCCEEEEEECCEEEECHHHHCCCHHHHHCCCCCCCCCHHHHHHH
RRDDLYGILNGIDYQDYNPKTDVNIYRNYNLPDEGKTNEKLINKLRLQEDLRLPVSSRVP
HHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
LIAFINRLVKQKGLDLITYVLPELLESEEVQFVFLGTGDPHYEQYLSYLAEKHQNLSAQI
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEE
KFDEGLARKIYAASDLFLMPSLFEPCGIGQQIAIRYGSVPIVRKVGGLHDTVYPSISEEG
EECCCHHHHHHHHCCHHCCHHHCCCCCCCCEEEEEECCCHHHHHHCCCCHHCCCCCCCCC
TRGIGFTFESFNAHEMLFTIKEAIQYYHQKAFWQEIINNLTTIDFSWEKSACEYIELYHK
CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHH
LIHRNTNSTRKESYLK
HHHCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA