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The map label for this gene is 188585195

Identifier: 188585195

GI number: 188585195

Start: 579245

End: 579760

Strand: Reverse

Name: 188585195

Synonym: Nther_0556

Alternate gene names: NA

Gene position: 579760-579245 (Counterclockwise)

Preceding gene: 188585196

Following gene: 188585194

Centisome position: 18.31

GC content: 28.1

Gene sequence:

>516_bases
TTGATCTATTACTATTACGATAATAAACACGGTTTACTCAAGGAACTGGTGATAAGACATGTCCAGGAAACTCTAGAATT
TAAAGAAACCTTACTAGAGGAAATTGATAATTATTCCGAAGAAGAAATCAAAAAGATTTCCCAAAGATTATTTAATTTTT
TAAAACAAAAGAGCAAAATTCTTAGTATTTTGACCATTGAAACATTAAAATCCGGTTCACAAGATCATAATATTTTTCGA
ATACTGCATCCTATTTACGAAAAAACTTTGAAAGATCTAGAAGAAAAAGGCTACAAAATAGATAATCATACAGAACAGAT
TCTAAACTTGTTTTTCTTTGGTACCATTCCTGTTACCTTATTTATTGCACTAAAGGAAAAATGGTCCGAGTTTTATGGAA
TAGACTCTGACGAAACCGAAAAAATATTCCAAGCTAAAATAGATGAATTTCATATAAACTTTTATCAAGCATTAATTAAT
GATAAAACTAACACAAGCAACTTAATTAATAAGTGA

Upstream 100 bases:

>100_bases
AGAGAAAATATTACAAACTACGGAACACCTCTTTGCCGAAAAAGGATATGACGGAACTAAAGTCGATGAAATTGCTCACA
GAGCTCAAGTAAATAAAGCT

Downstream 100 bases:

>100_bases
ATTTATAGAATTTAATAGCATATTATTACAATAACACGAACTATTCTAGTTATATAAAAATCGTTAAATATGTACTAATA
ATTTGACAACTTTCATTTCA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MIYYYYDNKHGLLKELVIRHVQETLEFKETLLEEIDNYSEEEIKKISQRLFNFLKQKSKILSILTIETLKSGSQDHNIFR
ILHPIYEKTLKDLEEKGYKIDNHTEQILNLFFFGTIPVTLFIALKEKWSEFYGIDSDETEKIFQAKIDEFHINFYQALIN
DKTNTSNLINK

Sequences:

>Translated_171_residues
MIYYYYDNKHGLLKELVIRHVQETLEFKETLLEEIDNYSEEEIKKISQRLFNFLKQKSKILSILTIETLKSGSQDHNIFR
ILHPIYEKTLKDLEEKGYKIDNHTEQILNLFFFGTIPVTLFIALKEKWSEFYGIDSDETEKIFQAKIDEFHINFYQALIN
DKTNTSNLINK
>Mature_171_residues
MIYYYYDNKHGLLKELVIRHVQETLEFKETLLEEIDNYSEEEIKKISQRLFNFLKQKSKILSILTIETLKSGSQDHNIFR
ILHPIYEKTLKDLEEKGYKIDNHTEQILNLFFFGTIPVTLFIALKEKWSEFYGIDSDETEKIFQAKIDEFHINFYQALIN
DKTNTSNLINK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20464; Mature: 20464

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYYYYDNKHGLLKELVIRHVQETLEFKETLLEEIDNYSEEEIKKISQRLFNFLKQKSKI
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LSILTIETLKSGSQDHNIFRILHPIYEKTLKDLEEKGYKIDNHTEQILNLFFFGTIPVTL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
FIALKEKWSEFYGIDSDETEKIFQAKIDEFHINFYQALINDKTNTSNLINK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC
>Mature Secondary Structure
MIYYYYDNKHGLLKELVIRHVQETLEFKETLLEEIDNYSEEEIKKISQRLFNFLKQKSKI
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LSILTIETLKSGSQDHNIFRILHPIYEKTLKDLEEKGYKIDNHTEQILNLFFFGTIPVTL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
FIALKEKWSEFYGIDSDETEKIFQAKIDEFHINFYQALINDKTNTSNLINK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA