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The map label for this gene is ybeB [H]

Identifier: 188585175

GI number: 188585175

Start: 557155

End: 557499

Strand: Direct

Name: ybeB [H]

Synonym: Nther_0536

Alternate gene names: 188585175

Gene position: 557155-557499 (Clockwise)

Preceding gene: 188585174

Following gene: 188585176

Centisome position: 17.6

GC content: 35.65

Gene sequence:

>345_bases
TTGCAAGATTCTCTGCAATTAGCAAAAAACATAGCTAAAAAATTAGATGACAAGAAGGGAAAGGATATTGTACTTCTAAA
AGTCAAGGATATCACCTTGATTGCTGATTATTTTGTGATTGTTACGGGAACTAGTACTACTCATATTCAATCCCTGGCGG
AGAACCTGATTTCTTCATTGAAGGAAGAGGATGATTTTTCACCCTTACACAAAGAGGGCTTGGCAGAAGGGAATTGGATT
TTGTTAGATTACGATTCTGTGTTAGTGCATATTTTCTTAGAGGATACAAGAGAGTTTTACAATTTGGAAAGACTATGGGG
AGAAGCTGAAGAAATTACTCTTTAA

Upstream 100 bases:

>100_bases
AAGATGATCCAGAAGCTCAAGTAACTGTAATAATAGGAGAAAATTATGTTCAAAACAACTCTGAAGAAAAGGAAAACAAC
TTTGAATAGGAGGGATCTAT

Downstream 100 bases:

>100_bases
ATATGTTTGACATGAAAGTTAGAATTTTATATAATTTTATCAAACTAAAAACTCAGAATTTTAAAGGCAATGAAAGAGAG
TAGTAATCGAGAGCAGGATT

Product: iojap-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MQDSLQLAKNIAKKLDDKKGKDIVLLKVKDITLIADYFVIVTGTSTTHIQSLAENLISSLKEEDDFSPLHKEGLAEGNWI
LLDYDSVLVHIFLEDTREFYNLERLWGEAEEITL

Sequences:

>Translated_114_residues
MQDSLQLAKNIAKKLDDKKGKDIVLLKVKDITLIADYFVIVTGTSTTHIQSLAENLISSLKEEDDFSPLHKEGLAEGNWI
LLDYDSVLVHIFLEDTREFYNLERLWGEAEEITL
>Mature_114_residues
MQDSLQLAKNIAKKLDDKKGKDIVLLKVKDITLIADYFVIVTGTSTTHIQSLAENLISSLKEEDDFSPLHKEGLAEGNWI
LLDYDSVLVHIFLEDTREFYNLERLWGEAEEITL

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=94, Percent_Identity=35.1063829787234, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI87081768, Length=93, Percent_Identity=38.7096774193548, Blast_Score=78, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 13022; Mature: 13022

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDSLQLAKNIAKKLDDKKGKDIVLLKVKDITLIADYFVIVTGTSTTHIQSLAENLISSL
CCHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEEEEECCCHHHHHHHHHHHHHHH
KEEDDFSPLHKEGLAEGNWILLDYDSVLVHIFLEDTREFYNLERLWGEAEEITL
HCCCCCCCHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure
MQDSLQLAKNIAKKLDDKKGKDIVLLKVKDITLIADYFVIVTGTSTTHIQSLAENLISSL
CCHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEEEEECCCHHHHHHHHHHHHHHH
KEEDDFSPLHKEGLAEGNWILLDYDSVLVHIFLEDTREFYNLERLWGEAEEITL
HCCCCCCCHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]