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The map label for this gene is 188585164

Identifier: 188585164

GI number: 188585164

Start: 546934

End: 548907

Strand: Direct

Name: 188585164

Synonym: Nther_0525

Alternate gene names: NA

Gene position: 546934-548907 (Clockwise)

Preceding gene: 188585163

Following gene: 188585165

Centisome position: 17.28

GC content: 36.83

Gene sequence:

>1974_bases
ATGAATATTCATCCATGGAATGAAGCCAAGGTTTTAGACAATGTCATGAAATTGGGTTACAATATTCCTAGTCAGGATCA
AGCTATGAGATTACAAAAAGGGGAGATTATAATGCCACGTAAGCAATTATCCTTTGAAGATATTGAAAGGATTTTACCTC
ATATTGAGAAACCAGGTAGATATATAGGAAATGAGTATAATTCAGTAGTTAAAGACTGGGAAGATAAGCTTAGTTTGGCT
TTGATTTTTCCCGATGTCTATGAAGTTGGTATGAGTAATTTAGGATTGAAAATTTTATACCATCATGTAAATAAACTCGA
TTGGGCTGTAGCCGAACGCGCTTTTTCCCCTTGGATAGATATGGAAAGGGAATTAAGAGATAATGAAATCCCTCTATATT
CTTTAGAAACTTTTACTCCCTTATCTCAATTTGATGTGGTAGGATTTTCACTACAGTATGAGCTCAGTTATAGTAATGTA
CTGACTGCTTTAGATTTGGGGGATATTCCCGTCACTAGTATTGATCGGGGAGAAGAAGATCCAATTGTAATGGCAGGGGG
ACCTAATGCTTTTTCACCTGAACCCCTGGCTGAATTTATTGACTTATTTGTAGTAGGTGAAGGTGAAATTGTTTTAATCG
ACGTACTTGAGCAAATCAAAGAATTACAGCAAAAGGGCTACTCTAGAGAAGATTTGTTATTTAAAATGACGGAGATAAAA
GGTGTTTATGTTCCTCGATTTTACGAAGAACAATATGAAAATGGTGAATACATGGGAGTTAAGCCTGTGAAATCCGATAT
ACCTGAAGTAATCCATAAACGCTTAATTCGGGATTTAGATGAAATTGAGTATCCTACAGAGATGATAGTCCCAAATATTG
ATATAGTTCATAATCGGGCCTTTGTGGAACTTTTTAGGGGATGTACCCAGGGATGTAGATTTTGTCAAGCAGGCATGATT
TATAGGCCTGTTAGGGATAGATCTCCCGCTAATCTAGTAGACCTTTCTCAACAGATAGTTTCCAAGACGGGGTATGAAGA
ACTATCACTCACTTCCCTGTCTACTGCAGATTACCCGCAAATCGATAGTTTGTTAGATAGTTTGAATGATTGCTTTCAAA
ATGATATTGCCTTGTCACTACCTTCATTAAGAGCTGATTCCTTTTCCGTTGATTTAGCCAAAAAGGTTCAACAAGGCAAA
AAAACGGGGCTGACATTTGCTCCTGAAGCGGGTACACCACGGTTACGAAATGTAATCAATAAAAAAGTTCACGAAGAAGA
CATGATGAAAGCAGCAGAAGCAGCTTTTAAAAGCGGGTGGGACAAGATTAAGCTTTATTTTATGATTGGATTACCTACTG
AAAGAGAAGAAGATTTAGAAGGAATAGTAGAACTATCCAACAAAGTAATTAAACTATATAAACAAATTACAGGGAAAAAT
AGATTAAAACTGAATGTTAGTACATCAACTTTTGTACCTAAACCTCACACTCCTTTTCAATGGATGGGACAGCTTTCTAG
AGAAGAAATAAACAGGCGTCAAAAATATTTAAAACAGAATCTTAATCATCCTGCTATCAATTACAGCTGGACAGACCCGA
ATCCCAGTTTTTTAGAGGCTTGTATAGCAAAAGGGGACAGGAAAATCGGTAAGGTTCTTTATCAGGCTTATCTCAATGGT
GTCAGATTTGACGGTTGGAGTGATCAGTTTGACTTTAAACTATGGGAACAGGCTTTTTCAGAACTCGGTGTAAACCCTGA
AGATTATGCCAATAAGGACTTGGACTTAGGGCAAACATTATCATGGGACCATATCAGTCCCATGATTAAAAAAAGTTTTT
TAAAGCGTGAATACAAACGAGCTATAGAGGAAAAAACAACCAGTGACTGTGACCATAATTTGGATAATTGTAGCTTTTGT
AATATTTGTATGGAAACAGAACTGCTTCCATCAAAGGAAGGGAGGAGGAACTAG

Upstream 100 bases:

>100_bases
AGATTTTATGAATTGGCTGTATTAAATAAGAATGTTGATAACTGAAATTTCAGTTTCACAGGATCAACAAAAGAATATAA
TAGCGCCTATGAATTGAGCT

Downstream 100 bases:

>100_bases
TGAAACTATGGTTTAGTTTTGAAAAAATAGATAAGATGAAATATATTTCATACTTAGATCTTTTGAATGTGTTCGCTCGG
GCTATTAAACGGGCGGGAAT

Product: Radical SAM domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 657; Mature: 657

Protein sequence:

>657_residues
MNIHPWNEAKVLDNVMKLGYNIPSQDQAMRLQKGEIIMPRKQLSFEDIERILPHIEKPGRYIGNEYNSVVKDWEDKLSLA
LIFPDVYEVGMSNLGLKILYHHVNKLDWAVAERAFSPWIDMERELRDNEIPLYSLETFTPLSQFDVVGFSLQYELSYSNV
LTALDLGDIPVTSIDRGEEDPIVMAGGPNAFSPEPLAEFIDLFVVGEGEIVLIDVLEQIKELQQKGYSREDLLFKMTEIK
GVYVPRFYEEQYENGEYMGVKPVKSDIPEVIHKRLIRDLDEIEYPTEMIVPNIDIVHNRAFVELFRGCTQGCRFCQAGMI
YRPVRDRSPANLVDLSQQIVSKTGYEELSLTSLSTADYPQIDSLLDSLNDCFQNDIALSLPSLRADSFSVDLAKKVQQGK
KTGLTFAPEAGTPRLRNVINKKVHEEDMMKAAEAAFKSGWDKIKLYFMIGLPTEREEDLEGIVELSNKVIKLYKQITGKN
RLKLNVSTSTFVPKPHTPFQWMGQLSREEINRRQKYLKQNLNHPAINYSWTDPNPSFLEACIAKGDRKIGKVLYQAYLNG
VRFDGWSDQFDFKLWEQAFSELGVNPEDYANKDLDLGQTLSWDHISPMIKKSFLKREYKRAIEEKTTSDCDHNLDNCSFC
NICMETELLPSKEGRRN

Sequences:

>Translated_657_residues
MNIHPWNEAKVLDNVMKLGYNIPSQDQAMRLQKGEIIMPRKQLSFEDIERILPHIEKPGRYIGNEYNSVVKDWEDKLSLA
LIFPDVYEVGMSNLGLKILYHHVNKLDWAVAERAFSPWIDMERELRDNEIPLYSLETFTPLSQFDVVGFSLQYELSYSNV
LTALDLGDIPVTSIDRGEEDPIVMAGGPNAFSPEPLAEFIDLFVVGEGEIVLIDVLEQIKELQQKGYSREDLLFKMTEIK
GVYVPRFYEEQYENGEYMGVKPVKSDIPEVIHKRLIRDLDEIEYPTEMIVPNIDIVHNRAFVELFRGCTQGCRFCQAGMI
YRPVRDRSPANLVDLSQQIVSKTGYEELSLTSLSTADYPQIDSLLDSLNDCFQNDIALSLPSLRADSFSVDLAKKVQQGK
KTGLTFAPEAGTPRLRNVINKKVHEEDMMKAAEAAFKSGWDKIKLYFMIGLPTEREEDLEGIVELSNKVIKLYKQITGKN
RLKLNVSTSTFVPKPHTPFQWMGQLSREEINRRQKYLKQNLNHPAINYSWTDPNPSFLEACIAKGDRKIGKVLYQAYLNG
VRFDGWSDQFDFKLWEQAFSELGVNPEDYANKDLDLGQTLSWDHISPMIKKSFLKREYKRAIEEKTTSDCDHNLDNCSFC
NICMETELLPSKEGRRN
>Mature_657_residues
MNIHPWNEAKVLDNVMKLGYNIPSQDQAMRLQKGEIIMPRKQLSFEDIERILPHIEKPGRYIGNEYNSVVKDWEDKLSLA
LIFPDVYEVGMSNLGLKILYHHVNKLDWAVAERAFSPWIDMERELRDNEIPLYSLETFTPLSQFDVVGFSLQYELSYSNV
LTALDLGDIPVTSIDRGEEDPIVMAGGPNAFSPEPLAEFIDLFVVGEGEIVLIDVLEQIKELQQKGYSREDLLFKMTEIK
GVYVPRFYEEQYENGEYMGVKPVKSDIPEVIHKRLIRDLDEIEYPTEMIVPNIDIVHNRAFVELFRGCTQGCRFCQAGMI
YRPVRDRSPANLVDLSQQIVSKTGYEELSLTSLSTADYPQIDSLLDSLNDCFQNDIALSLPSLRADSFSVDLAKKVQQGK
KTGLTFAPEAGTPRLRNVINKKVHEEDMMKAAEAAFKSGWDKIKLYFMIGLPTEREEDLEGIVELSNKVIKLYKQITGKN
RLKLNVSTSTFVPKPHTPFQWMGQLSREEINRRQKYLKQNLNHPAINYSWTDPNPSFLEACIAKGDRKIGKVLYQAYLNG
VRFDGWSDQFDFKLWEQAFSELGVNPEDYANKDLDLGQTLSWDHISPMIKKSFLKREYKRAIEEKTTSDCDHNLDNCSFC
NICMETELLPSKEGRRN

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 75499; Mature: 75499

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIHPWNEAKVLDNVMKLGYNIPSQDQAMRLQKGEIIMPRKQLSFEDIERILPHIEKPGR
CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCEECCHHHCCHHHHHHHHHHCCCCCH
YIGNEYNSVVKDWEDKLSLALIFPDVYEVGMSNLGLKILYHHVNKLDWAVAERAFSPWID
HHCCHHHHHHHHHHHHCEEEEECCHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHCCHHH
MERELRDNEIPLYSLETFTPLSQFDVVGFSLQYELSYSNVLTALDLGDIPVTSIDRGEED
HHHHHCCCCCCEEEECCCCCHHHHHEEEEEEEEEECHHHHHHHHCCCCCCCCCCCCCCCC
PIVMAGGPNAFSPEPLAEFIDLFVVGEGEIVLIDVLEQIKELQQKGYSREDLLFKMTEIK
CEEEECCCCCCCCCHHHHHHHEEEECCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
GVYVPRFYEEQYENGEYMGVKPVKSDIPEVIHKRLIRDLDEIEYPTEMIVPNIDIVHNRA
CEECCHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHH
FVELFRGCTQGCRFCQAGMIYRPVRDRSPANLVDLSQQIVSKTGYEELSLTSLSTADYPQ
HHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHCCCCHHEEEECCCCCCCH
IDSLLDSLNDCFQNDIALSLPSLRADSFSVDLAKKVQQGKKTGLTFAPEAGTPRLRNVIN
HHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHH
KKVHEEDMMKAAEAAFKSGWDKIKLYFMIGLPTEREEDLEGIVELSNKVIKLYKQITGKN
HHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
RLKLNVSTSTFVPKPHTPFQWMGQLSREEINRRQKYLKQNLNHPAINYSWTDPNPSFLEA
EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH
CIAKGDRKIGKVLYQAYLNGVRFDGWSDQFDFKLWEQAFSELGVNPEDYANKDLDLGQTL
HHHHCCHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC
SWDHISPMIKKSFLKREYKRAIEEKTTSDCDHNLDNCSFCNICMETELLPSKEGRRN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNIHPWNEAKVLDNVMKLGYNIPSQDQAMRLQKGEIIMPRKQLSFEDIERILPHIEKPGR
CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCEECCHHHCCHHHHHHHHHHCCCCCH
YIGNEYNSVVKDWEDKLSLALIFPDVYEVGMSNLGLKILYHHVNKLDWAVAERAFSPWID
HHCCHHHHHHHHHHHHCEEEEECCHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHCCHHH
MERELRDNEIPLYSLETFTPLSQFDVVGFSLQYELSYSNVLTALDLGDIPVTSIDRGEED
HHHHHCCCCCCEEEECCCCCHHHHHEEEEEEEEEECHHHHHHHHCCCCCCCCCCCCCCCC
PIVMAGGPNAFSPEPLAEFIDLFVVGEGEIVLIDVLEQIKELQQKGYSREDLLFKMTEIK
CEEEECCCCCCCCCHHHHHHHEEEECCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
GVYVPRFYEEQYENGEYMGVKPVKSDIPEVIHKRLIRDLDEIEYPTEMIVPNIDIVHNRA
CEECCHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHH
FVELFRGCTQGCRFCQAGMIYRPVRDRSPANLVDLSQQIVSKTGYEELSLTSLSTADYPQ
HHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHCCCCHHEEEECCCCCCCH
IDSLLDSLNDCFQNDIALSLPSLRADSFSVDLAKKVQQGKKTGLTFAPEAGTPRLRNVIN
HHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHH
KKVHEEDMMKAAEAAFKSGWDKIKLYFMIGLPTEREEDLEGIVELSNKVIKLYKQITGKN
HHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
RLKLNVSTSTFVPKPHTPFQWMGQLSREEINRRQKYLKQNLNHPAINYSWTDPNPSFLEA
EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH
CIAKGDRKIGKVLYQAYLNGVRFDGWSDQFDFKLWEQAFSELGVNPEDYANKDLDLGQTL
HHHHCCHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC
SWDHISPMIKKSFLKREYKRAIEEKTTSDCDHNLDNCSFCNICMETELLPSKEGRRN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]