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The map label for this gene is yvbX [H]

Identifier: 188585128

GI number: 188585128

Start: 517473

End: 519212

Strand: Reverse

Name: yvbX [H]

Synonym: Nther_0489

Alternate gene names: 188585128

Gene position: 519212-517473 (Counterclockwise)

Preceding gene: 188585166

Following gene: 188585126

Centisome position: 16.4

GC content: 35.57

Gene sequence:

>1740_bases
ATGGAAGTTCAAAAAAAGACTGTTTTAAAATTTAATATTCCAACTTTAATTTTAGGATTGATTATTTTCATTTTAATCTT
GGCTAGTTTACTTACTTATCTCTACCTCACACCTAGTCGCCAAAAGGTAGAACCCTATCCGGACTCAGAACAAACACGAC
TCATTTACGAAGACCAAGATTTAGGAACTGAAAATACTGCTTTAGTAGAAGATGAAGTTTATTTGTCAAAAAGTTTTATT
GAGAAGTCATTAGACCCCTACATATATTACGATGATCAGGGTGACTACATAACAATAACTACCAAAAATAAATTTTTCCA
AATGCAAACAGATAATTTAACTGCTGCAGTGAATGATGAAGAAAGAGAATTACAGTTCTCTCCAAAACTTATCCAAGGTG
AGCCTTTTCTTCCCTCGGATATTTTGGAAGAACTCTACCCTATCACTGTCCAACATAATCAAGATGATAATTTAGTCTTA
ATAGATAATTTAGAAAAACAGGTACTTAAAGGATATGCCAAAGAAAACGAAACAAGGGTTAGAGAAGAACCAAGTATTCG
AACTGGAATCATAGAAAGTTTGGACAAGCAATCTAAGATAACCATATATCATCAAAGTGGAGATTGGTTTTTTATACGGA
CCGAAAAGGGTTATTTAGGTTATGTTCAAAGTAGTGATATAACTTTAGATGAACTTTCAATTAGAGAAAAACATATTGAA
GACGATGATGTTGATCCCCCTAGCCGTCCCTTCGGGGAACCCATTAATTTGACCTGGGAACATGTAATCAGTGAAAATCC
AAATCCCAATGATCTCCCTGATTTACCAGGGGTGAATGTGATCAGTCCCACCTGGTTTCACTTGCAAGATCCGGAAGGTA
ATATTGTCAACCAAGCAGATAAATCTTACGTAAATTGGGCCCATGATAATGATATGCAAGTATGGGGGTTGTTCTCCAAT
AACTTTGATCCAGATCTAACTTCTGAGTTTTTAGAAGACCCTGAGGCAAGAAGGAATGCAATTGAACAAATTTTGCTTTA
TTCTGATATATATAATTTAGACGGTATCAACTTAGACTTTGAAAATATTCATATCGATGATAGAGATGCCTATACTCAGT
TTGTCAGAGAAATTTCGCCTTTTTTAAGGGAACAGGGGTTAGTGGTTTCAATTGATGTGACCTTTATATCTCAAAGCGAA
AATTGGTCTTTAAGTTACGATAGACATGCTTTTAGCAAGACCGTAGACTATATTATGGTTATGGCATATGATGAACATTG
GGGGGATAGCCCGGTAGCAGGTTCAGTATCAAGTCTTCCCTGGGTAGAAGAGAATTTAGAAGAAATTTTATCGGTGGTTC
CCAATGATCAACTTATCTTAGGTATCCCTTTTTATACTAGATTATGGGAAGAAGAAAAGAACGATGATGGCTCAATTTCA
GTGTCTTCATCTGCCTATGGTATGGAACAGATCAAAAACATATTAGAAAACAATGATGCAGATATCACCTTTGATGACGA
TACTAAGCAATATTACGCTGAATATGAAGATAACGACACACGATACAGGACCTGGCTTGAAACTGAAGAGTCAATTAAAA
AAAGGTTAAATTTAGTTCATGAATATAACTTGGCAGGTGTTGCCTCTTGGAGAAGAGGATTTGAAAAAGAGGAAATCTGG
GAGGTAATTAAAAACAAGATGGGAATCCCTAAGGATCCGGGATCTAAAATAACTGATTGA

Upstream 100 bases:

>100_bases
TTCTTAATAATTAATCAAGTAACTCGTTTCTAAGGTTCTCAAAGTTACCATTTTTTATGCTATAATTATGACAAATATTA
AAGAAAGGAAGTCAAAAATA

Downstream 100 bases:

>100_bases
TAAAAGAAAGCAGGGTATATACCCTGCTTTCTTTTATGTGTATAAATGTATAAATCGTATTAGTTATTAGTTCAATTTCT
ATTTATGGTGACAATCTAGC

Product: glycoside hydrolase family 18

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MEVQKKTVLKFNIPTLILGLIIFILILASLLTYLYLTPSRQKVEPYPDSEQTRLIYEDQDLGTENTALVEDEVYLSKSFI
EKSLDPYIYYDDQGDYITITTKNKFFQMQTDNLTAAVNDEERELQFSPKLIQGEPFLPSDILEELYPITVQHNQDDNLVL
IDNLEKQVLKGYAKENETRVREEPSIRTGIIESLDKQSKITIYHQSGDWFFIRTEKGYLGYVQSSDITLDELSIREKHIE
DDDVDPPSRPFGEPINLTWEHVISENPNPNDLPDLPGVNVISPTWFHLQDPEGNIVNQADKSYVNWAHDNDMQVWGLFSN
NFDPDLTSEFLEDPEARRNAIEQILLYSDIYNLDGINLDFENIHIDDRDAYTQFVREISPFLREQGLVVSIDVTFISQSE
NWSLSYDRHAFSKTVDYIMVMAYDEHWGDSPVAGSVSSLPWVEENLEEILSVVPNDQLILGIPFYTRLWEEEKNDDGSIS
VSSSAYGMEQIKNILENNDADITFDDDTKQYYAEYEDNDTRYRTWLETEESIKKRLNLVHEYNLAGVASWRRGFEKEEIW
EVIKNKMGIPKDPGSKITD

Sequences:

>Translated_579_residues
MEVQKKTVLKFNIPTLILGLIIFILILASLLTYLYLTPSRQKVEPYPDSEQTRLIYEDQDLGTENTALVEDEVYLSKSFI
EKSLDPYIYYDDQGDYITITTKNKFFQMQTDNLTAAVNDEERELQFSPKLIQGEPFLPSDILEELYPITVQHNQDDNLVL
IDNLEKQVLKGYAKENETRVREEPSIRTGIIESLDKQSKITIYHQSGDWFFIRTEKGYLGYVQSSDITLDELSIREKHIE
DDDVDPPSRPFGEPINLTWEHVISENPNPNDLPDLPGVNVISPTWFHLQDPEGNIVNQADKSYVNWAHDNDMQVWGLFSN
NFDPDLTSEFLEDPEARRNAIEQILLYSDIYNLDGINLDFENIHIDDRDAYTQFVREISPFLREQGLVVSIDVTFISQSE
NWSLSYDRHAFSKTVDYIMVMAYDEHWGDSPVAGSVSSLPWVEENLEEILSVVPNDQLILGIPFYTRLWEEEKNDDGSIS
VSSSAYGMEQIKNILENNDADITFDDDTKQYYAEYEDNDTRYRTWLETEESIKKRLNLVHEYNLAGVASWRRGFEKEEIW
EVIKNKMGIPKDPGSKITD
>Mature_579_residues
MEVQKKTVLKFNIPTLILGLIIFILILASLLTYLYLTPSRQKVEPYPDSEQTRLIYEDQDLGTENTALVEDEVYLSKSFI
EKSLDPYIYYDDQGDYITITTKNKFFQMQTDNLTAAVNDEERELQFSPKLIQGEPFLPSDILEELYPITVQHNQDDNLVL
IDNLEKQVLKGYAKENETRVREEPSIRTGIIESLDKQSKITIYHQSGDWFFIRTEKGYLGYVQSSDITLDELSIREKHIE
DDDVDPPSRPFGEPINLTWEHVISENPNPNDLPDLPGVNVISPTWFHLQDPEGNIVNQADKSYVNWAHDNDMQVWGLFSN
NFDPDLTSEFLEDPEARRNAIEQILLYSDIYNLDGINLDFENIHIDDRDAYTQFVREISPFLREQGLVVSIDVTFISQSE
NWSLSYDRHAFSKTVDYIMVMAYDEHWGDSPVAGSVSSLPWVEENLEEILSVVPNDQLILGIPFYTRLWEEEKNDDGSIS
VSSSAYGMEQIKNILENNDADITFDDDTKQYYAEYEDNDTRYRTWLETEESIKKRLNLVHEYNLAGVASWRRGFEKEEIW
EVIKNKMGIPKDPGSKITD

Specific function: Unknown

COG id: COG3858

COG function: function code R; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 18 family [H]

Homologues:

Organism=Drosophila melanogaster, GI22024049, Length=238, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011583
- InterPro:   IPR001223
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00704 Glyco_hydro_18 [H]

EC number: NA

Molecular weight: Translated: 67157; Mature: 67157

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: PS01095 CHITINASE_18

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVQKKTVLKFNIPTLILGLIIFILILASLLTYLYLTPSRQKVEPYPDSEQTRLIYEDQD
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEECCC
LGTENTALVEDEVYLSKSFIEKSLDPYIYYDDQGDYITITTKNKFFQMQTDNLTAAVNDE
CCCCCCEEEEHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCEEEEEECCCEEEEECCC
ERELQFSPKLIQGEPFLPSDILEELYPITVQHNQDDNLVLIDNLEKQVLKGYAKENETRV
HHHEECCCCEECCCCCCCHHHHHHHCCEEEEECCCCCEEEECCHHHHHHHHHHHCCCHHH
REEPSIRTGIIESLDKQSKITIYHQSGDWFFIRTEKGYLGYVQSSDITLDELSIREKHIE
CCCCCHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCEEEEEECCCCCHHHHHHHHHCCC
DDDVDPPSRPFGEPINLTWEHVISENPNPNDLPDLPGVNVISPTWFHLQDPEGNIVNQAD
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
KSYVNWAHDNDMQVWGLFSNNFDPDLTSEFLEDPEARRNAIEQILLYSDIYNLDGINLDF
HHHCCCCCCCCCEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEC
ENIHIDDRDAYTQFVREISPFLREQGLVVSIDVTFISQSENWSLSYDRHAFSKTVDYIMV
CEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCEECCHHHHHHHHCEEEE
MAYDEHWGDSPVAGSVSSLPWVEENLEEILSVVPNDQLILGIPFYTRLWEEEKNDDGSIS
EEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCCCEE
VSSSAYGMEQIKNILENNDADITFDDDTKQYYAEYEDNDTRYRTWLETEESIKKRLNLVH
ECCCCCCHHHHHHHHCCCCCEEEECCCCHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH
EYNLAGVASWRRGFEKEEIWEVIKNKMGIPKDPGSKITD
HCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MEVQKKTVLKFNIPTLILGLIIFILILASLLTYLYLTPSRQKVEPYPDSEQTRLIYEDQD
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEECCC
LGTENTALVEDEVYLSKSFIEKSLDPYIYYDDQGDYITITTKNKFFQMQTDNLTAAVNDE
CCCCCCEEEEHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCEEEEEECCCEEEEECCC
ERELQFSPKLIQGEPFLPSDILEELYPITVQHNQDDNLVLIDNLEKQVLKGYAKENETRV
HHHEECCCCEECCCCCCCHHHHHHHCCEEEEECCCCCEEEECCHHHHHHHHHHHCCCHHH
REEPSIRTGIIESLDKQSKITIYHQSGDWFFIRTEKGYLGYVQSSDITLDELSIREKHIE
CCCCCHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCEEEEEECCCCCHHHHHHHHHCCC
DDDVDPPSRPFGEPINLTWEHVISENPNPNDLPDLPGVNVISPTWFHLQDPEGNIVNQAD
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
KSYVNWAHDNDMQVWGLFSNNFDPDLTSEFLEDPEARRNAIEQILLYSDIYNLDGINLDF
HHHCCCCCCCCCEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEC
ENIHIDDRDAYTQFVREISPFLREQGLVVSIDVTFISQSENWSLSYDRHAFSKTVDYIMV
CEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCEECCHHHHHHHHCEEEE
MAYDEHWGDSPVAGSVSSLPWVEENLEEILSVVPNDQLILGIPFYTRLWEEEKNDDGSIS
EEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCCCEE
VSSSAYGMEQIKNILENNDADITFDDDTKQYYAEYEDNDTRYRTWLETEESIKKRLNLVH
ECCCCCCHHHHHHHHCCCCCEEEECCCCHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH
EYNLAGVASWRRGFEKEEIWEVIKNKMGIPKDPGSKITD
HCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]