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The map label for this gene is 188585122

Identifier: 188585122

GI number: 188585122

Start: 513312

End: 513899

Strand: Direct

Name: 188585122

Synonym: Nther_0483

Alternate gene names: NA

Gene position: 513312-513899 (Clockwise)

Preceding gene: 188585121

Following gene: 188585125

Centisome position: 16.22

GC content: 36.22

Gene sequence:

>588_bases
GTGCAATCCTATACCCATTTAACAGATTTAGAATCGCTAAAGAAAGAAGCACTTATATGTAAAAATTGTCACTTAAGGGA
AACTTGTAATGGGGTAGTATTTGGTGAAGGGGACGAACAAGCCGATATTATGTTAATAGGTGAAGGTCCCGGGGCAAAAG
AGGATGAACTGCAACGCCCCTTTGTTGGACCGGCGGGAGAATTATTGACAAAAATGTTAGCAGCTATAAATTTTTCTAGA
GATGATGTTTATATTACTAATATAGTCAAATGCCGACCACCTAATAATAGAACCCCGAATCAAGAAGAGATGGATACTTG
TTTACCTATATTACGACAGCAGATCCGCTTAATTCAATCTAAAATTATAGTTATCTTGGGAGGAGCCGCATTAAAGGGGT
TAATAGACAAAAATATGAAAATTACTAAAGCCCGAGGAAGTTGGTTAGAACGCAAAGGAATACATATCTTGCCTACATAC
CATCCAGCTTATTTACTGAGGAATCCAGCCAAAAAAAAGGAATCATGGGAAGATCTACAAAATTTAAAAGCAAAATATAT
GGAATTAACTAACAATGACATCGATTAA

Upstream 100 bases:

>100_bases
CATTCTAAAAAACACAGCTACTGCCAGTCAATTACTGGTAATAGCTGTGTTTTTATTTTATAATAAAAAATAGTTAACTT
TCATAAAGGGGGATATTTCT

Downstream 100 bases:

>100_bases
CTTGTAATTTGGTATGCGAAAAAAACATCTTAACCACCTTGCTATAGACCTTTAATTAAAAAACGACCCTCCAAAAGGAG
AGTCGTTAATGCTTAATAGG

Product: phage SPO1 DNA polymerase-related protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; Uracil DNA Glycosylase Superfamily Protein; DNA-Directed DNA Polymerase; DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase-Related Protein; Uracil-DNA Glycosylase Family 4 Protein; DNA Polymerase-Related Protein Bacteriophage-Type; Phage DNA Polymerase; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; DNA Polymerase-Related Protein; DNA Glycosylase; Phage SPO1 DNA Polymerase Domain-Containing Protein; Uracil-DNA Glycosylase Phage-Related Protein; Phage Shock Protein E; DNA Polymerase Domain-Containing Protein; Uracil-DNA Glycosylase C-Terminal; Uracil-DNA Glycosylase-Related Protein; Phage SpO1 DNA Polymerase-Related Protein; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase Domain Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Uracil-DNA Glycosylase C-Terminal Domain Protein; Bacteriophage-Related DNA Polymerase; Phage Related DNA Polymerase; Bacteriophage-Type DNA Polymerase; Uracil-DNA Glycosylase-Like Protein; DNA Polymerase Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; N-Terminus Of Bacteriophage-Type DNA Polymerase

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MQSYTHLTDLESLKKEALICKNCHLRETCNGVVFGEGDEQADIMLIGEGPGAKEDELQRPFVGPAGELLTKMLAAINFSR
DDVYITNIVKCRPPNNRTPNQEEMDTCLPILRQQIRLIQSKIIVILGGAALKGLIDKNMKITKARGSWLERKGIHILPTY
HPAYLLRNPAKKKESWEDLQNLKAKYMELTNNDID

Sequences:

>Translated_195_residues
MQSYTHLTDLESLKKEALICKNCHLRETCNGVVFGEGDEQADIMLIGEGPGAKEDELQRPFVGPAGELLTKMLAAINFSR
DDVYITNIVKCRPPNNRTPNQEEMDTCLPILRQQIRLIQSKIIVILGGAALKGLIDKNMKITKARGSWLERKGIHILPTY
HPAYLLRNPAKKKESWEDLQNLKAKYMELTNNDID
>Mature_195_residues
MQSYTHLTDLESLKKEALICKNCHLRETCNGVVFGEGDEQADIMLIGEGPGAKEDELQRPFVGPAGELLTKMLAAINFSR
DDVYITNIVKCRPPNNRTPNQEEMDTCLPILRQQIRLIQSKIIVILGGAALKGLIDKNMKITKARGSWLERKGIHILPTY
HPAYLLRNPAKKKESWEDLQNLKAKYMELTNNDID

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 22058; Mature: 22058

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSYTHLTDLESLKKEALICKNCHLRETCNGVVFGEGDEQADIMLIGEGPGAKEDELQRP
CCCCHHHHHHHHHHHHHHHHCCCCCHHHCCEEEECCCCCCCCEEEEECCCCCCHHHHCCC
FVGPAGELLTKMLAAINFSRDDVYITNIVKCRPPNNRTPNQEEMDTCLPILRQQIRLIQS
CCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KIIVILGGAALKGLIDKNMKITKARGSWLERKGIHILPTYHPAYLLRNPAKKKESWEDLQ
CEEEEECCHHHHHHHCCCCEEEECCCCHHHHCCCEEECCCCHHHHHCCCHHHHHHHHHHH
NLKAKYMELTNNDID
HHHHHHHHHCCCCCC
>Mature Secondary Structure
MQSYTHLTDLESLKKEALICKNCHLRETCNGVVFGEGDEQADIMLIGEGPGAKEDELQRP
CCCCHHHHHHHHHHHHHHHHCCCCCHHHCCEEEECCCCCCCCEEEEECCCCCCHHHHCCC
FVGPAGELLTKMLAAINFSRDDVYITNIVKCRPPNNRTPNQEEMDTCLPILRQQIRLIQS
CCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KIIVILGGAALKGLIDKNMKITKARGSWLERKGIHILPTYHPAYLLRNPAKKKESWEDLQ
CEEEEECCHHHHHHHCCCCEEEECCCCHHHHCCCEEECCCCHHHHHCCCHHHHHHHHHHH
NLKAKYMELTNNDID
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA