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The map label for this gene is ytcJ [H]

Identifier: 188585065

GI number: 188585065

Start: 445320

End: 446939

Strand: Direct

Name: ytcJ [H]

Synonym: Nther_0426

Alternate gene names: 188585065

Gene position: 445320-446939 (Clockwise)

Preceding gene: 188585064

Following gene: 188585067

Centisome position: 14.07

GC content: 37.72

Gene sequence:

>1620_bases
ATGAGTGAAATCCTTTTAAAGAATTGTCGTGTGTATACCATGGACGAATCTGTACCTTATGCAGAGCAAATATTGTTAAA
AAACGGAAAAATAGCTCAACTAGGTACTAGAGATGATAATTTAGCTTCCAATAATAGTGTCCAGGAAATGGACTTAGGTG
GTCAGACGGTTTTACCTGGTTTGAATGATAGTCACTTACATCTTCTTAGTTATGGGATGGCTCTTTCAACTGTAGATTTA
AGTGATGTCAGTTCATTCAGAGAATTAATTGCTAAAGTTCAAAATTATATAGACAATAACAATATTCCAAAACATGAATG
GGTAATCGGACAGGGATTTGATGAAGAAAATTTACAAGAAAAAGATTTCCCTACTCGAGAGATATTGGATCAAATTTCAC
AATGTCATCCAGTGATAGTGAAGCGAAAGTGTACTCATGTAAGTGGAGTAAATAGCTATGCGTTGGATTTAGCAGGGATC
ACCGCTGAAGATAACGAGAAAATTGAGGGTGGGAAAGTTTATTTAGACCAAGATGGGAAACCTAATGGAGTTTTGGCAGA
AAATGCCCAAAACTTGTTATCACATATCCTACCTTCTTATTCGGAAAAAGACCTGGAGAAATATATCAAGTTGGCTGGGG
AAGCTTTTATTGATAAGGGTTTGACTTCTGTCCAATCTGATGATTTAAAGGCGATTCCAGGTGGCGAAGATATGATTATG
AATGCTTACCTTTCCCTGGCGGAAAAAGGAGAACTCCCCGTAAAGGTGAATTTACAACTTCAATTATCTTCTGAAGAAGA
AATAACTACTTTTATACAAAAGTATAGTCCTTATTTCCAAAGTTCAGTTACAGATTATTTAAATTTTGGTCCTTTAAAAG
TTTTATTAGATGGTTCTCTTGGAGGAAAGACTGCAGCACTTAGACAACCCTATTTAGGCGATCAAGAAAATTTCGGTATT
GTAACCTATACTCCGGAAAGTCTTGATTCCCTCTTGGATTGTGCAGCACGTCATCATTTACAAATTGCATGTCATGGTAT
TGGTGATTACGCTATTGAGCTATTTTTAGACTCCATTGATAAAATCCAGGCTAAATTTGGTGGAGATTATCGTCATCGAA
TAATTCATTGTCAATTGACAGATTTGGATCTGATTAATCGAATTGCTCGTCAAAACATTTCAGTAGATGCTCAACCTGAT
TTTGTTGGAAGTGATTATGGACTATTAGAAGAGCGCCTAGGCTTTGCTCGCAGTATTAACACCTATGCCTGGAAAACTAT
GTTGGATAAGGGGATCAATGTATCTGGGAGTTCAGACTGTCCTGTTGAACCTTTTGACCCGAGACTAGGAATTAAGGCAG
CAGTTACCAGACAAGACGCTAATAATAATCCCTGTGGAGGATGGCATCCCTGGGAAAAAGTGTCAGTTTTTGAAGCCCTT
AAGATGTATACTGTAAATTCTGCTTATGCCACCTTTGAGGAACAGGTCAAAGGAAAGCTAGCACCTGGTTATTGTGCAGA
TATGGTGGTCCTGGAGGAGGATCCTTATAGCACTCCTCCCCAAGAACTTGATTCCCTTTCTGTAAATAAAGTCTTTATTA
ACGGCAAAATAGTCAAGTAA

Upstream 100 bases:

>100_bases
GGTTAGACATCAGAATTTGGTTGAACTACTCAATGAGTTGAGAAGGAGGAAATCTTCATCTTCCTCTTCTTCAGAAAAAA
CAAGCTATGGAGGTTAAAAA

Downstream 100 bases:

>100_bases
ATTAAGACTTTTGTGATTGCTTTCGTGCTACCCGTCCCGCTAAAACAACGGGATCATATACGGGGGAAAAGGGTGGTGCA
TAAGACAAATCTAAATGATA

Product: Amidohydrolase 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 538

Protein sequence:

>539_residues
MSEILLKNCRVYTMDESVPYAEQILLKNGKIAQLGTRDDNLASNNSVQEMDLGGQTVLPGLNDSHLHLLSYGMALSTVDL
SDVSSFRELIAKVQNYIDNNNIPKHEWVIGQGFDEENLQEKDFPTREILDQISQCHPVIVKRKCTHVSGVNSYALDLAGI
TAEDNEKIEGGKVYLDQDGKPNGVLAENAQNLLSHILPSYSEKDLEKYIKLAGEAFIDKGLTSVQSDDLKAIPGGEDMIM
NAYLSLAEKGELPVKVNLQLQLSSEEEITTFIQKYSPYFQSSVTDYLNFGPLKVLLDGSLGGKTAALRQPYLGDQENFGI
VTYTPESLDSLLDCAARHHLQIACHGIGDYAIELFLDSIDKIQAKFGGDYRHRIIHCQLTDLDLINRIARQNISVDAQPD
FVGSDYGLLEERLGFARSINTYAWKTMLDKGINVSGSSDCPVEPFDPRLGIKAAVTRQDANNNPCGGWHPWEKVSVFEAL
KMYTVNSAYATFEEQVKGKLAPGYCADMVVLEEDPYSTPPQELDSLSVNKVFINGKIVK

Sequences:

>Translated_539_residues
MSEILLKNCRVYTMDESVPYAEQILLKNGKIAQLGTRDDNLASNNSVQEMDLGGQTVLPGLNDSHLHLLSYGMALSTVDL
SDVSSFRELIAKVQNYIDNNNIPKHEWVIGQGFDEENLQEKDFPTREILDQISQCHPVIVKRKCTHVSGVNSYALDLAGI
TAEDNEKIEGGKVYLDQDGKPNGVLAENAQNLLSHILPSYSEKDLEKYIKLAGEAFIDKGLTSVQSDDLKAIPGGEDMIM
NAYLSLAEKGELPVKVNLQLQLSSEEEITTFIQKYSPYFQSSVTDYLNFGPLKVLLDGSLGGKTAALRQPYLGDQENFGI
VTYTPESLDSLLDCAARHHLQIACHGIGDYAIELFLDSIDKIQAKFGGDYRHRIIHCQLTDLDLINRIARQNISVDAQPD
FVGSDYGLLEERLGFARSINTYAWKTMLDKGINVSGSSDCPVEPFDPRLGIKAAVTRQDANNNPCGGWHPWEKVSVFEAL
KMYTVNSAYATFEEQVKGKLAPGYCADMVVLEEDPYSTPPQELDSLSVNKVFINGKIVK
>Mature_538_residues
SEILLKNCRVYTMDESVPYAEQILLKNGKIAQLGTRDDNLASNNSVQEMDLGGQTVLPGLNDSHLHLLSYGMALSTVDLS
DVSSFRELIAKVQNYIDNNNIPKHEWVIGQGFDEENLQEKDFPTREILDQISQCHPVIVKRKCTHVSGVNSYALDLAGIT
AEDNEKIEGGKVYLDQDGKPNGVLAENAQNLLSHILPSYSEKDLEKYIKLAGEAFIDKGLTSVQSDDLKAIPGGEDMIMN
AYLSLAEKGELPVKVNLQLQLSSEEEITTFIQKYSPYFQSSVTDYLNFGPLKVLLDGSLGGKTAALRQPYLGDQENFGIV
TYTPESLDSLLDCAARHHLQIACHGIGDYAIELFLDSIDKIQAKFGGDYRHRIIHCQLTDLDLINRIARQNISVDAQPDF
VGSDYGLLEERLGFARSINTYAWKTMLDKGINVSGSSDCPVEPFDPRLGIKAAVTRQDANNNPCGGWHPWEKVSVFEALK
MYTVNSAYATFEEQVKGKLAPGYCADMVVLEEDPYSTPPQELDSLSVNKVFINGKIVK

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 59729; Mature: 59598

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEILLKNCRVYTMDESVPYAEQILLKNGKIAQLGTRDDNLASNNSVQEMDLGGQTVLPG
CCCCHHHCCEEEEECCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCCCEECCC
LNDSHLHLLSYGMALSTVDLSDVSSFRELIAKVQNYIDNNNIPKHEWVIGQGFDEENLQE
CCCCCCHHHHHCCHHEECCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
KDFPTREILDQISQCHPVIVKRKCTHVSGVNSYALDLAGITAEDNEKIEGGKVYLDQDGK
CCCCHHHHHHHHHCCCCEEHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCC
PNGVLAENAQNLLSHILPSYSEKDLEKYIKLAGEAFIDKGLTSVQSDDLKAIPGGEDMIM
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCEECCCCHHHHH
NAYLSLAEKGELPVKVNLQLQLSSEEEITTFIQKYSPYFQSSVTDYLNFGPLKVLLDGSL
HHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEEECCC
GGKTAALRQPYLGDQENFGIVTYTPESLDSLLDCAARHHLQIACHGIGDYAIELFLDSID
CCCCHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHH
KIQAKFGGDYRHRIIHCQLTDLDLINRIARQNISVDAQPDFVGSDYGLLEERLGFARSIN
HHHHHHCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
TYAWKTMLDKGINVSGSSDCPVEPFDPRLGIKAAVTRQDANNNPCGGWHPWEKVSVFEAL
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH
KMYTVNSAYATFEEQVKGKLAPGYCADMVVLEEDPYSTPPQELDSLSVNKVFINGKIVK
HHHCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCEEEEEECCEEEC
>Mature Secondary Structure 
SEILLKNCRVYTMDESVPYAEQILLKNGKIAQLGTRDDNLASNNSVQEMDLGGQTVLPG
CCCHHHCCEEEEECCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCCCEECCC
LNDSHLHLLSYGMALSTVDLSDVSSFRELIAKVQNYIDNNNIPKHEWVIGQGFDEENLQE
CCCCCCHHHHHCCHHEECCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
KDFPTREILDQISQCHPVIVKRKCTHVSGVNSYALDLAGITAEDNEKIEGGKVYLDQDGK
CCCCHHHHHHHHHCCCCEEHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCC
PNGVLAENAQNLLSHILPSYSEKDLEKYIKLAGEAFIDKGLTSVQSDDLKAIPGGEDMIM
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCEECCCCHHHHH
NAYLSLAEKGELPVKVNLQLQLSSEEEITTFIQKYSPYFQSSVTDYLNFGPLKVLLDGSL
HHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEEECCC
GGKTAALRQPYLGDQENFGIVTYTPESLDSLLDCAARHHLQIACHGIGDYAIELFLDSID
CCCCHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHH
KIQAKFGGDYRHRIIHCQLTDLDLINRIARQNISVDAQPDFVGSDYGLLEERLGFARSIN
HHHHHHCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
TYAWKTMLDKGINVSGSSDCPVEPFDPRLGIKAAVTRQDANNNPCGGWHPWEKVSVFEAL
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH
KMYTVNSAYATFEEQVKGKLAPGYCADMVVLEEDPYSTPPQELDSLSVNKVFINGKIVK
HHHCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCEEEEEECCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]