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The map label for this gene is yufP [H]

Identifier: 188585061

GI number: 188585061

Start: 441122

End: 442297

Strand: Direct

Name: yufP [H]

Synonym: Nther_0422

Alternate gene names: 188585061

Gene position: 441122-442297 (Clockwise)

Preceding gene: 188585060

Following gene: 188585062

Centisome position: 13.94

GC content: 39.71

Gene sequence:

>1176_bases
ATGACGCAGCCGAAAAATAAAATTAACGAAAGTGTTAATAATGCTATGGAAAAAGTTAGAGGCGCTGTCATGTCTAGTCA
GAATGTCCGTTCTACCGCATCTGAACTAATTATGTCCCTGGCATCGATATTGGTTGCTTTATTAGTAGGAGTTATATTTA
TTTTAATTGCGGAACAATCACCAATAGATGCTTACTATGCCTTATTTGACGGAGCCTTTGGTTCATTTACGAATTTCATG
GGAACTTTACACCGATCTACGCCATTAATTTTAACAGGACTGGCTGTAGCTTTTTCTTTTAGGACAGGCCTATTCAATAT
AGGTGCCGAAGGGCAGCTATTAATGGGTGGATTTATTGCTGGTTTAGTCGGATTTTACTTTGAAGGTCTTCCCACAATAA
TACATTTGCCACTGACGGTCTTAGCTGGAATGTTGGCAGGGGGTATTTGGGCAGGTATACCCGGTATATTAAAAGCTAAA
CTAGGGGTTCATGAAGTTATAAATACCATTATGCTAAACCACATTGCCATTCACATTACTATTTACTATGGTATAAACCG
TTTTAGAGAAGGAGGCCGTCAGGCTACTCCTTATGTTCAGGAAACCGCTGAACTATTCCAATTTAATCAAATGCCTGAAC
ACCCTATTTTACAGCATTTACCATTTGTTAATTTCTTTGACCATACTAGTATAAATTTACACAGTGGCTTTTTAATTGCT
TTAATTGTTGCTGTAATAGTCTGGTATATACTCTGGAAAACCACATTGGGTTATGAGATCAGGGCAGTTGGATTAAACTC
CCCTGCTGCCGAATACGGTGGTATAAACGTGTCTCAGAAAATTGTAGTTGCCATGTTAATCAGTGGTGGCATTGCAGGCT
TGGCAGGAATAAGTGAAACCCTTGGGACCCATCAAAGTTTTGTGGAGGGTATGGATGCCGGCCATGGTTTTACGGGAATT
GCCGTGGCATTATTAGGTAGAAACCATCCTGTAGGTGTTATCCTAGGGGGATTACTATTTGGTGCTCTTTCTCAGGGAGG
ACTGCAAATGCAGTTTGCAGGTGTTCCAAGGGAAATTGTAATAATTATTCAGGCTCTAGTGATATTCTTTGTAGCAAGTT
TCCAGATGTTTAAGATATTCATTGCCAGAAGAAAAGCTAAAGGGGAGGCTAAATAA

Upstream 100 bases:

>100_bases
ATGATGGTAGTATTGTAGATGTAGTTAATTCAGAAGAAGTTGATGAATATCAGTTAGGAGCATTGATGACGGGGTCTAAT
TTAGAGAAGGAGGCTTCTAA

Downstream 100 bases:

>100_bases
TGGAATTATTAGGTGAAATTTTTAATATTCCCATATTAATTGCCAGTTTTAGACTTGCCACACCCCTTCTACTAGCGGCG
CTAGGTGGGATTTTTTCCGA

Product: inner-membrane translocator

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MTQPKNKINESVNNAMEKVRGAVMSSQNVRSTASELIMSLASILVALLVGVIFILIAEQSPIDAYYALFDGAFGSFTNFM
GTLHRSTPLILTGLAVAFSFRTGLFNIGAEGQLLMGGFIAGLVGFYFEGLPTIIHLPLTVLAGMLAGGIWAGIPGILKAK
LGVHEVINTIMLNHIAIHITIYYGINRFREGGRQATPYVQETAELFQFNQMPEHPILQHLPFVNFFDHTSINLHSGFLIA
LIVAVIVWYILWKTTLGYEIRAVGLNSPAAEYGGINVSQKIVVAMLISGGIAGLAGISETLGTHQSFVEGMDAGHGFTGI
AVALLGRNHPVGVILGGLLFGALSQGGLQMQFAGVPREIVIIIQALVIFFVASFQMFKIFIARRKAKGEAK

Sequences:

>Translated_391_residues
MTQPKNKINESVNNAMEKVRGAVMSSQNVRSTASELIMSLASILVALLVGVIFILIAEQSPIDAYYALFDGAFGSFTNFM
GTLHRSTPLILTGLAVAFSFRTGLFNIGAEGQLLMGGFIAGLVGFYFEGLPTIIHLPLTVLAGMLAGGIWAGIPGILKAK
LGVHEVINTIMLNHIAIHITIYYGINRFREGGRQATPYVQETAELFQFNQMPEHPILQHLPFVNFFDHTSINLHSGFLIA
LIVAVIVWYILWKTTLGYEIRAVGLNSPAAEYGGINVSQKIVVAMLISGGIAGLAGISETLGTHQSFVEGMDAGHGFTGI
AVALLGRNHPVGVILGGLLFGALSQGGLQMQFAGVPREIVIIIQALVIFFVASFQMFKIFIARRKAKGEAK
>Mature_390_residues
TQPKNKINESVNNAMEKVRGAVMSSQNVRSTASELIMSLASILVALLVGVIFILIAEQSPIDAYYALFDGAFGSFTNFMG
TLHRSTPLILTGLAVAFSFRTGLFNIGAEGQLLMGGFIAGLVGFYFEGLPTIIHLPLTVLAGMLAGGIWAGIPGILKAKL
GVHEVINTIMLNHIAIHITIYYGINRFREGGRQATPYVQETAELFQFNQMPEHPILQHLPFVNFFDHTSINLHSGFLIAL
IVAVIVWYILWKTTLGYEIRAVGLNSPAAEYGGINVSQKIVVAMLISGGIAGLAGISETLGTHQSFVEGMDAGHGFTGIA
VALLGRNHPVGVILGGLLFGALSQGGLQMQFAGVPREIVIIIQALVIFFVASFQMFKIFIARRKAKGEAK

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790524, Length=139, Percent_Identity=35.2517985611511, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 42043; Mature: 41912

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPKNKINESVNNAMEKVRGAVMSSQNVRSTASELIMSLASILVALLVGVIFILIAEQS
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PIDAYYALFDGAFGSFTNFMGTLHRSTPLILTGLAVAFSFRTGLFNIGAEGQLLMGGFIA
CCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHH
GLVGFYFEGLPTIIHLPLTVLAGMLAGGIWAGIPGILKAKLGVHEVINTIMLNHIAIHIT
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEE
IYYGINRFREGGRQATPYVQETAELFQFNQMPEHPILQHLPFVNFFDHTSINLHSGFLIA
EEHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHH
LIVAVIVWYILWKTTLGYEIRAVGLNSPAAEYGGINVSQKIVVAMLISGGIAGLAGISET
HHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHH
LGTHQSFVEGMDAGHGFTGIAVALLGRNHPVGVILGGLLFGALSQGGLQMQFAGVPREIV
HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHH
IIIQALVIFFVASFQMFKIFIARRKAKGEAK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TQPKNKINESVNNAMEKVRGAVMSSQNVRSTASELIMSLASILVALLVGVIFILIAEQS
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PIDAYYALFDGAFGSFTNFMGTLHRSTPLILTGLAVAFSFRTGLFNIGAEGQLLMGGFIA
CCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHH
GLVGFYFEGLPTIIHLPLTVLAGMLAGGIWAGIPGILKAKLGVHEVINTIMLNHIAIHIT
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEE
IYYGINRFREGGRQATPYVQETAELFQFNQMPEHPILQHLPFVNFFDHTSINLHSGFLIA
EEHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHH
LIVAVIVWYILWKTTLGYEIRAVGLNSPAAEYGGINVSQKIVVAMLISGGIAGLAGISET
HHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHH
LGTHQSFVEGMDAGHGFTGIAVALLGRNHPVGVILGGLLFGALSQGGLQMQFAGVPREIV
HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHH
IIIQALVIFFVASFQMFKIFIARRKAKGEAK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]