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The map label for this gene is tcsA [H]

Identifier: 188585059

GI number: 188585059

Start: 438247

End: 439389

Strand: Direct

Name: tcsA [H]

Synonym: Nther_0420

Alternate gene names: 188585059

Gene position: 438247-439389 (Clockwise)

Preceding gene: 188585058

Following gene: 188585060

Centisome position: 13.84

GC content: 40.16

Gene sequence:

>1143_bases
ATGTTGAGTAAAAAATTTCTAGCTATTTTAATGGCAGGAATGTTAGTATTTGTTTTTGCAGCATGTGGAACAGATGAGGA
CCCTGCAGAGGATCCGGAAAACGGTGAAAATGGTGAAGCTGCTGAAGAAGAGGAAGATGTTCCTACAGTTGGGATTGTAT
TCTCAACCGGAGGATTAGGAGATCAATCTTTTAACGATTCAGCTTATAGAGGAATGGAAATGGCTGAAGAAGAGTTTGAC
TTTGAGTGGGACTACATTGAGCCTGAAAACCCAGCAGATTTTGATCCCGCTTTGACTACTTTTGCTGAAGATGAAGTTGA
TTTATTAATCGGTGTAGGATTCCAAATGGAAGCAGAAGTTAAAGAAATAGCTGAAAATTATCCCGATATGAACGTGGCTA
TTGTTGATCACAGTTATGAAGAAGAAACTCCTGAAAACCTTGAAGAATTGGTATTTGACGAACCAGGAGGCTCTTTCTTA
GCAGGAGCTTTGGCTGCCAAAGTTACTGAAACCGATGTGGTAGGTTTCGTTGGTGGTGTCAATGGTCCACTAATTCACAG
ATTTGAAGGCGGATTTGTTCAAGGTGTTCAGTATGTGGATGAAGATATTGAAATTTTAGGTTCTTATGCAGACTCTTTTG
GAGACCCTGCAAGAGGTACGGACATAACTGAAGGCTTTGTGGATCAAGGTGCTGACGTGATTTATCATGCTGCCGGTGGA
ACAGGTGACGGTGTATTCACTATAGCATCCGACTATGATAATGTGTATGCAATTGGTGTAGACGACAACCAGAACCATAT
TCAGCCTGGTCATATTATAGCTAGTATGCTTAAGCGCGTTGATGTAGCTGTTTATGAAACTGTTCAGAGAGTTGTTGAAG
ATGAGTTCGAAGGTGGAATCACTCGCGAATTCAGCTTAGAAGATGATGGTGTAGGACTATCCAGCTTAGATGAACTAGAT
GTACAAGAGAAAGAAGCAGTAGAACTAGATGCAATCACTGAAGAAGAACTTGAATTGATTAAAGAAATGAAAGAAGAGAT
AACTGCTGAACATGCTGACCAAATAGAGCAAATCAAGCAAGATATTATCGATGATGAAATCGAAGTCGAAGATTGGATGG
AAACTGGAAGACAGGATTATTAA

Upstream 100 bases:

>100_bases
TAGATGTTCAAGGGGGAGGTGGTTCTTGAACAATCAAAATAATACGGTCATAATGGTACGGTTGGTAAAAAAATTTAGCT
AAATTAAGAAGGGGGTAATA

Downstream 100 bases:

>100_bases
TTTCGTAATGGATAATAAATTTCAAACTTCAGGCGCGTAATAGCGCCTGAAGGTTTCTTTTTTGTCTTTTTATTATTTCA
TAAAAGCTGTTATATTTAGT

Product: basic membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MLSKKFLAILMAGMLVFVFAACGTDEDPAEDPENGENGEAAEEEEDVPTVGIVFSTGGLGDQSFNDSAYRGMEMAEEEFD
FEWDYIEPENPADFDPALTTFAEDEVDLLIGVGFQMEAEVKEIAENYPDMNVAIVDHSYEEETPENLEELVFDEPGGSFL
AGALAAKVTETDVVGFVGGVNGPLIHRFEGGFVQGVQYVDEDIEILGSYADSFGDPARGTDITEGFVDQGADVIYHAAGG
TGDGVFTIASDYDNVYAIGVDDNQNHIQPGHIIASMLKRVDVAVYETVQRVVEDEFEGGITREFSLEDDGVGLSSLDELD
VQEKEAVELDAITEEELELIKEMKEEITAEHADQIEQIKQDIIDDEIEVEDWMETGRQDY

Sequences:

>Translated_380_residues
MLSKKFLAILMAGMLVFVFAACGTDEDPAEDPENGENGEAAEEEEDVPTVGIVFSTGGLGDQSFNDSAYRGMEMAEEEFD
FEWDYIEPENPADFDPALTTFAEDEVDLLIGVGFQMEAEVKEIAENYPDMNVAIVDHSYEEETPENLEELVFDEPGGSFL
AGALAAKVTETDVVGFVGGVNGPLIHRFEGGFVQGVQYVDEDIEILGSYADSFGDPARGTDITEGFVDQGADVIYHAAGG
TGDGVFTIASDYDNVYAIGVDDNQNHIQPGHIIASMLKRVDVAVYETVQRVVEDEFEGGITREFSLEDDGVGLSSLDELD
VQEKEAVELDAITEEELELIKEMKEEITAEHADQIEQIKQDIIDDEIEVEDWMETGRQDY
>Mature_380_residues
MLSKKFLAILMAGMLVFVFAACGTDEDPAEDPENGENGEAAEEEEDVPTVGIVFSTGGLGDQSFNDSAYRGMEMAEEEFD
FEWDYIEPENPADFDPALTTFAEDEVDLLIGVGFQMEAEVKEIAENYPDMNVAIVDHSYEEETPENLEELVFDEPGGSFL
AGALAAKVTETDVVGFVGGVNGPLIHRFEGGFVQGVQYVDEDIEILGSYADSFGDPARGTDITEGFVDQGADVIYHAAGG
TGDGVFTIASDYDNVYAIGVDDNQNHIQPGHIIASMLKRVDVAVYETVQRVVEDEFEGGITREFSLEDDGVGLSSLDELD
VQEKEAVELDAITEEELELIKEMKEEITAEHADQIEQIKQDIIDDEIEVEDWMETGRQDY

Specific function: Unknown

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 41704; Mature: 41704

Theoretical pI: Translated: 3.49; Mature: 3.49

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKKFLAILMAGMLVFVFAACGTDEDPAEDPENGENGEAAEEEEDVPTVGIVFSTGGLG
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEEECCCCC
DQSFNDSAYRGMEMAEEEFDFEWDYIEPENPADFDPALTTFAEDEVDLLIGVGFQMEAEV
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCHHHH
KEIAENYPDMNVAIVDHSYEEETPENLEELVFDEPGGSFLAGALAAKVTETDVVGFVGGV
HHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
NGPLIHRFEGGFVQGVQYVDEDIEILGSYADSFGDPARGTDITEGFVDQGADVIYHAAGG
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEECCCC
TGDGVFTIASDYDNVYAIGVDDNQNHIQPGHIIASMLKRVDVAVYETVQRVVEDEFEGGI
CCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TREFSLEDDGVGLSSLDELDVQEKEAVELDAITEEELELIKEMKEEITAEHADQIEQIKQ
EEEECCCCCCCCCCCHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIIDDEIEVEDWMETGRQDY
HHCCCCCCHHHHHHCCCCCC
>Mature Secondary Structure
MLSKKFLAILMAGMLVFVFAACGTDEDPAEDPENGENGEAAEEEEDVPTVGIVFSTGGLG
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEEECCCCC
DQSFNDSAYRGMEMAEEEFDFEWDYIEPENPADFDPALTTFAEDEVDLLIGVGFQMEAEV
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCHHHH
KEIAENYPDMNVAIVDHSYEEETPENLEELVFDEPGGSFLAGALAAKVTETDVVGFVGGV
HHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
NGPLIHRFEGGFVQGVQYVDEDIEILGSYADSFGDPARGTDITEGFVDQGADVIYHAAGG
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEECCCC
TGDGVFTIASDYDNVYAIGVDDNQNHIQPGHIIASMLKRVDVAVYETVQRVVEDEFEGGI
CCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TREFSLEDDGVGLSSLDELDVQEKEAVELDAITEEELELIKEMKEEITAEHADQIEQIKQ
EEEECCCCCCCCCCCHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIIDDEIEVEDWMETGRQDY
HHCCCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]