Definition Natranaerobius thermophilus JW/NM-WN-LF, complete genome.
Accession NC_010718
Length 3,165,557

Click here to switch to the map view.

The map label for this gene is 188585052

Identifier: 188585052

GI number: 188585052

Start: 433277

End: 434113

Strand: Reverse

Name: 188585052

Synonym: Nther_0413

Alternate gene names: NA

Gene position: 434113-433277 (Counterclockwise)

Preceding gene: 188585053

Following gene: 188585051

Centisome position: 13.71

GC content: 34.17

Gene sequence:

>837_bases
ATGTCGAAAATATATGCTTTATATGGAAAAAGCGGCACTGGCAAAAGTCACCGCGCCATAAGTATTGCTTTCAATTACAA
TATTCCCTTGATTATAGACGATGGCTTATTAATATATAAAGGCAAAAAAATTCCCGGATCAATTTCCGGCAAACAGGAAC
AAAATCGTATCAGAGCAGTTAAAAGAGCAATTTTTGACGATAATGACTATGCACAAAAAATGAGTGCTAGACTACAAGCA
CTAAACCCTTCAAAAATTTTAATAATCGGTACTTCGCAGCACATGATAAATAAAATCATCCAAAACCTTAAACTGGATCA
ACCTGATCATTGGATAGACATTTCTGAAATCACTTCTACCCGAGAACGTAAAAAAGCTAAATACCATCGTGATAGGGGTC
GTCATGTTGTACCCTTGTCTCCTGTAGAAGTCCGTAAGACTTTTAAGGTTCCATTATTGGACCGCTTGAAACTGCTTATA
CCTAATAGGGGAAAAACAGAATATCTAGGAGAACAATCCGTGGTTAAACCTAATTTCCATTCCCTTGGCGGAATTTATAT
TAAAGAAAAGGCTCTTGAGGATATGGCTTATTTTGCCTTACATCATGATTTAACAGATCATGATGTCAAACAAATTAAAA
CAATAAAAATAACTAACAGTGCCCAGTCAACCAGCATAGAAATTCATTTAAAACTAGGTTATGATAACCCATTGCATCTG
ACTGCAAAAAGTTTACAAGCTGATTTACAAGATAAAATAAAAAAATTGTCTGGTTTAGACTCCCTTACAATTAAAATTAT
AATTTCTGAAATAGATGTACCCGATAGATTTAAGTAA

Upstream 100 bases:

>100_bases
TAGCTTCTGCAGGCAAATGAAAAGTAATCAATTAGACCCTCTTAAAGTCAAGGAGGAAATCTCCGGTTTTTTCAAATAAG
AAAGGTGGCTTAATAAAGAA

Downstream 100 bases:

>100_bases
AGCCCTCCTGGTTTTTTGACCAGGAGGGCTTTTTTATACTGTTTCAATAGTAAATATTGTATTTATTATTCAAAAAAAGG
GAAAAATTACATTTTAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MSKIYALYGKSGTGKSHRAISIAFNYNIPLIIDDGLLIYKGKKIPGSISGKQEQNRIRAVKRAIFDDNDYAQKMSARLQA
LNPSKILIIGTSQHMINKIIQNLKLDQPDHWIDISEITSTRERKKAKYHRDRGRHVVPLSPVEVRKTFKVPLLDRLKLLI
PNRGKTEYLGEQSVVKPNFHSLGGIYIKEKALEDMAYFALHHDLTDHDVKQIKTIKITNSAQSTSIEIHLKLGYDNPLHL
TAKSLQADLQDKIKKLSGLDSLTIKIIISEIDVPDRFK

Sequences:

>Translated_278_residues
MSKIYALYGKSGTGKSHRAISIAFNYNIPLIIDDGLLIYKGKKIPGSISGKQEQNRIRAVKRAIFDDNDYAQKMSARLQA
LNPSKILIIGTSQHMINKIIQNLKLDQPDHWIDISEITSTRERKKAKYHRDRGRHVVPLSPVEVRKTFKVPLLDRLKLLI
PNRGKTEYLGEQSVVKPNFHSLGGIYIKEKALEDMAYFALHHDLTDHDVKQIKTIKITNSAQSTSIEIHLKLGYDNPLHL
TAKSLQADLQDKIKKLSGLDSLTIKIIISEIDVPDRFK
>Mature_277_residues
SKIYALYGKSGTGKSHRAISIAFNYNIPLIIDDGLLIYKGKKIPGSISGKQEQNRIRAVKRAIFDDNDYAQKMSARLQAL
NPSKILIIGTSQHMINKIIQNLKLDQPDHWIDISEITSTRERKKAKYHRDRGRHVVPLSPVEVRKTFKVPLLDRLKLLIP
NRGKTEYLGEQSVVKPNFHSLGGIYIKEKALEDMAYFALHHDLTDHDVKQIKTIKITNSAQSTSIEIHLKLGYDNPLHLT
AKSLQADLQDKIKKLSGLDSLTIKIIISEIDVPDRFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31579; Mature: 31448

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS00591 GLYCOSYL_HYDROL_F10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIYALYGKSGTGKSHRAISIAFNYNIPLIIDDGLLIYKGKKIPGSISGKQEQNRIRAV
CCCEEEEECCCCCCCCCEEEEEEEECCCCEEEECCEEEEECCCCCCCCCCCHHHHHHHHH
KRAIFDDNDYAQKMSARLQALNPSKILIIGTSQHMINKIIQNLKLDQPDHWIDISEITST
HHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEEHHHHHHH
RERKKAKYHRDRGRHVVPLSPVEVRKTFKVPLLDRLKLLIPNRGKTEYLGEQSVVKPNFH
HHHHHHHHHHHCCCEEECCCHHHHHHEECCCHHHHHHEECCCCCCCCCCCCCCCCCCCHH
SLGGIYIKEKALEDMAYFALHHDLTDHDVKQIKTIKITNSAQSTSIEIHLKLGYDNPLHL
HCCCEEEEHHHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCCEEEEEEEEECCCCCCEE
TAKSLQADLQDKIKKLSGLDSLTIKIIISEIDVPDRFK
EHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCC
>Mature Secondary Structure 
SKIYALYGKSGTGKSHRAISIAFNYNIPLIIDDGLLIYKGKKIPGSISGKQEQNRIRAV
CCEEEEECCCCCCCCCEEEEEEEECCCCEEEECCEEEEECCCCCCCCCCCHHHHHHHHH
KRAIFDDNDYAQKMSARLQALNPSKILIIGTSQHMINKIIQNLKLDQPDHWIDISEITST
HHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEEHHHHHHH
RERKKAKYHRDRGRHVVPLSPVEVRKTFKVPLLDRLKLLIPNRGKTEYLGEQSVVKPNFH
HHHHHHHHHHHCCCEEECCCHHHHHHEECCCHHHHHHEECCCCCCCCCCCCCCCCCCCHH
SLGGIYIKEKALEDMAYFALHHDLTDHDVKQIKTIKITNSAQSTSIEIHLKLGYDNPLHL
HCCCEEEEHHHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCCEEEEEEEEECCCCCCEE
TAKSLQADLQDKIKKLSGLDSLTIKIIISEIDVPDRFK
EHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA