| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188585052
Identifier: 188585052
GI number: 188585052
Start: 433277
End: 434113
Strand: Reverse
Name: 188585052
Synonym: Nther_0413
Alternate gene names: NA
Gene position: 434113-433277 (Counterclockwise)
Preceding gene: 188585053
Following gene: 188585051
Centisome position: 13.71
GC content: 34.17
Gene sequence:
>837_bases ATGTCGAAAATATATGCTTTATATGGAAAAAGCGGCACTGGCAAAAGTCACCGCGCCATAAGTATTGCTTTCAATTACAA TATTCCCTTGATTATAGACGATGGCTTATTAATATATAAAGGCAAAAAAATTCCCGGATCAATTTCCGGCAAACAGGAAC AAAATCGTATCAGAGCAGTTAAAAGAGCAATTTTTGACGATAATGACTATGCACAAAAAATGAGTGCTAGACTACAAGCA CTAAACCCTTCAAAAATTTTAATAATCGGTACTTCGCAGCACATGATAAATAAAATCATCCAAAACCTTAAACTGGATCA ACCTGATCATTGGATAGACATTTCTGAAATCACTTCTACCCGAGAACGTAAAAAAGCTAAATACCATCGTGATAGGGGTC GTCATGTTGTACCCTTGTCTCCTGTAGAAGTCCGTAAGACTTTTAAGGTTCCATTATTGGACCGCTTGAAACTGCTTATA CCTAATAGGGGAAAAACAGAATATCTAGGAGAACAATCCGTGGTTAAACCTAATTTCCATTCCCTTGGCGGAATTTATAT TAAAGAAAAGGCTCTTGAGGATATGGCTTATTTTGCCTTACATCATGATTTAACAGATCATGATGTCAAACAAATTAAAA CAATAAAAATAACTAACAGTGCCCAGTCAACCAGCATAGAAATTCATTTAAAACTAGGTTATGATAACCCATTGCATCTG ACTGCAAAAAGTTTACAAGCTGATTTACAAGATAAAATAAAAAAATTGTCTGGTTTAGACTCCCTTACAATTAAAATTAT AATTTCTGAAATAGATGTACCCGATAGATTTAAGTAA
Upstream 100 bases:
>100_bases TAGCTTCTGCAGGCAAATGAAAAGTAATCAATTAGACCCTCTTAAAGTCAAGGAGGAAATCTCCGGTTTTTTCAAATAAG AAAGGTGGCTTAATAAAGAA
Downstream 100 bases:
>100_bases AGCCCTCCTGGTTTTTTGACCAGGAGGGCTTTTTTATACTGTTTCAATAGTAAATATTGTATTTATTATTCAAAAAAAGG GAAAAATTACATTTTAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSKIYALYGKSGTGKSHRAISIAFNYNIPLIIDDGLLIYKGKKIPGSISGKQEQNRIRAVKRAIFDDNDYAQKMSARLQA LNPSKILIIGTSQHMINKIIQNLKLDQPDHWIDISEITSTRERKKAKYHRDRGRHVVPLSPVEVRKTFKVPLLDRLKLLI PNRGKTEYLGEQSVVKPNFHSLGGIYIKEKALEDMAYFALHHDLTDHDVKQIKTIKITNSAQSTSIEIHLKLGYDNPLHL TAKSLQADLQDKIKKLSGLDSLTIKIIISEIDVPDRFK
Sequences:
>Translated_278_residues MSKIYALYGKSGTGKSHRAISIAFNYNIPLIIDDGLLIYKGKKIPGSISGKQEQNRIRAVKRAIFDDNDYAQKMSARLQA LNPSKILIIGTSQHMINKIIQNLKLDQPDHWIDISEITSTRERKKAKYHRDRGRHVVPLSPVEVRKTFKVPLLDRLKLLI PNRGKTEYLGEQSVVKPNFHSLGGIYIKEKALEDMAYFALHHDLTDHDVKQIKTIKITNSAQSTSIEIHLKLGYDNPLHL TAKSLQADLQDKIKKLSGLDSLTIKIIISEIDVPDRFK >Mature_277_residues SKIYALYGKSGTGKSHRAISIAFNYNIPLIIDDGLLIYKGKKIPGSISGKQEQNRIRAVKRAIFDDNDYAQKMSARLQAL NPSKILIIGTSQHMINKIIQNLKLDQPDHWIDISEITSTRERKKAKYHRDRGRHVVPLSPVEVRKTFKVPLLDRLKLLIP NRGKTEYLGEQSVVKPNFHSLGGIYIKEKALEDMAYFALHHDLTDHDVKQIKTIKITNSAQSTSIEIHLKLGYDNPLHLT AKSLQADLQDKIKKLSGLDSLTIKIIISEIDVPDRFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31579; Mature: 31448
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: PS00591 GLYCOSYL_HYDROL_F10
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIYALYGKSGTGKSHRAISIAFNYNIPLIIDDGLLIYKGKKIPGSISGKQEQNRIRAV CCCEEEEECCCCCCCCCEEEEEEEECCCCEEEECCEEEEECCCCCCCCCCCHHHHHHHHH KRAIFDDNDYAQKMSARLQALNPSKILIIGTSQHMINKIIQNLKLDQPDHWIDISEITST HHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEEHHHHHHH RERKKAKYHRDRGRHVVPLSPVEVRKTFKVPLLDRLKLLIPNRGKTEYLGEQSVVKPNFH HHHHHHHHHHHCCCEEECCCHHHHHHEECCCHHHHHHEECCCCCCCCCCCCCCCCCCCHH SLGGIYIKEKALEDMAYFALHHDLTDHDVKQIKTIKITNSAQSTSIEIHLKLGYDNPLHL HCCCEEEEHHHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCCEEEEEEEEECCCCCCEE TAKSLQADLQDKIKKLSGLDSLTIKIIISEIDVPDRFK EHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCC >Mature Secondary Structure SKIYALYGKSGTGKSHRAISIAFNYNIPLIIDDGLLIYKGKKIPGSISGKQEQNRIRAV CCEEEEECCCCCCCCCEEEEEEEECCCCEEEECCEEEEECCCCCCCCCCCHHHHHHHHH KRAIFDDNDYAQKMSARLQALNPSKILIIGTSQHMINKIIQNLKLDQPDHWIDISEITST HHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEEHHHHHHH RERKKAKYHRDRGRHVVPLSPVEVRKTFKVPLLDRLKLLIPNRGKTEYLGEQSVVKPNFH HHHHHHHHHHHCCCEEECCCHHHHHHEECCCHHHHHHEECCCCCCCCCCCCCCCCCCCHH SLGGIYIKEKALEDMAYFALHHDLTDHDVKQIKTIKITNSAQSTSIEIHLKLGYDNPLHL HCCCEEEEHHHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCCEEEEEEEEECCCCCCEE TAKSLQADLQDKIKKLSGLDSLTIKIIISEIDVPDRFK EHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA