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The map label for this gene is tra905 [H]

Identifier: 188585025

GI number: 188585025

Start: 400654

End: 401778

Strand: Reverse

Name: tra905 [H]

Synonym: Nther_0386

Alternate gene names: 188585025

Gene position: 401778-400654 (Counterclockwise)

Preceding gene: 188585026

Following gene: 188585016

Centisome position: 12.69

GC content: 38.93

Gene sequence:

>1125_bases
ATGAAAAGTTTTGTTCAGGAATTTCTTCAAGAAAAAATTGAACTCATCATGCGTGAAGAAATTAGAAACTTTTTAAAAGA
GCAAGACGAAAAGAATTATCGAAACGGCTATTACACACGTTCTCTAGACACCTTGTTTGGCCAAATCGAAGATCTTAATG
TACCAAGGGATCGAAATGGTGATTTTCAAACCCAGCTAATAGAACCGTATCAAAAGCGTGATTGCTGGCTTGAAGAAGCT
ATCATCAGGATGTACCAAAAAGGTATGAGCACTCGTGATGTAGCAAAGTTCATTGAGACCCTTTTAGGCGATTCTTATTC
GCCTAGTACGGTAAGTAATATTACTGAAGTAGCTTTAGAAGATATTCAAGAGTTTCAAAACAGGCCACTCAAAAAGCGTT
ATAGTGTTCTCTACCTGGATGGCATGAACATCAAGCTGCGGCGTGATTCAGTAGAAAATGAGTCTGTTTACATAGCTTGT
GGTGTCGATGAAGAGGGGTACAGGGAAATACTAGGTTTCTACGTTGGTGGTAGAGAAAACGCCTTGGGTTGGCAAGAACT
ATTAAATGACCTGCACTCTCGTGGTGTACAGGAAGTATTGCTAGGTGTGTTTGACGGACTTCCTGGTTTGGCTGATGCTT
TCAAGAAGGTGTTTCCTAAAGCTGATGTCCAGCAGTGCGTCATTCACCAGGTTAGAAATACTTTGAATGCCGTAAGAAAA
AAAGACCAGTATGAAGTTGCTGAAGACCTAAAGCCTATATATAAGTCTTTTTCTAAAGAAGAGGCTCACCACCATTTCGA
AAAATTTAAAGAAAAATGGGGTTCAAGGTATCCCCGTGTTGTAGATTCCTGGGAAAAGAATTTGCCTAATTTATTAACTT
TCTTGGATTATCCATCTGATATTCGAGCTGTTATCTACACTACAAACTGGATCGAGAGAACTATTAAGGAAATTAGAAAA
CGTCTAAAGACTATGAACAGTTTAACTAGCCCAAAGGCTGCCGAAAAAGTGATCTTCTTTGCTATTCAGGACATCAATGT
TCGATGGGCTAATAAAAAACTTCGTGGTTTCAAACAATGCCAGCACAAGCTACAAGAAATGTTTGAGCTAAGATACGACT
GTTAA

Upstream 100 bases:

>100_bases
TTAAAACTCGGTCTACCTTCCTGGGGGGTGACATTTTCTCTGAACAAATTTATGCGTTTTTAGGTGACATTTTCAAAGAA
CATTGACACTAGAAGAAATC

Downstream 100 bases:

>100_bases
GACTTTTCCGAGGGCCCTACGCCCTTTACACAAAATTCTTGACACTACCTATTAAGGTTTCTACCGCTAATATCTTTAAG
TGATTTTCAGTTTTGCAATG

Product: transposase mutator type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MKSFVQEFLQEKIELIMREEIRNFLKEQDEKNYRNGYYTRSLDTLFGQIEDLNVPRDRNGDFQTQLIEPYQKRDCWLEEA
IIRMYQKGMSTRDVAKFIETLLGDSYSPSTVSNITEVALEDIQEFQNRPLKKRYSVLYLDGMNIKLRRDSVENESVYIAC
GVDEEGYREILGFYVGGRENALGWQELLNDLHSRGVQEVLLGVFDGLPGLADAFKKVFPKADVQQCVIHQVRNTLNAVRK
KDQYEVAEDLKPIYKSFSKEEAHHHFEKFKEKWGSRYPRVVDSWEKNLPNLLTFLDYPSDIRAVIYTTNWIERTIKEIRK
RLKTMNSLTSPKAAEKVIFFAIQDINVRWANKKLRGFKQCQHKLQEMFELRYDC

Sequences:

>Translated_374_residues
MKSFVQEFLQEKIELIMREEIRNFLKEQDEKNYRNGYYTRSLDTLFGQIEDLNVPRDRNGDFQTQLIEPYQKRDCWLEEA
IIRMYQKGMSTRDVAKFIETLLGDSYSPSTVSNITEVALEDIQEFQNRPLKKRYSVLYLDGMNIKLRRDSVENESVYIAC
GVDEEGYREILGFYVGGRENALGWQELLNDLHSRGVQEVLLGVFDGLPGLADAFKKVFPKADVQQCVIHQVRNTLNAVRK
KDQYEVAEDLKPIYKSFSKEEAHHHFEKFKEKWGSRYPRVVDSWEKNLPNLLTFLDYPSDIRAVIYTTNWIERTIKEIRK
RLKTMNSLTSPKAAEKVIFFAIQDINVRWANKKLRGFKQCQHKLQEMFELRYDC
>Mature_374_residues
MKSFVQEFLQEKIELIMREEIRNFLKEQDEKNYRNGYYTRSLDTLFGQIEDLNVPRDRNGDFQTQLIEPYQKRDCWLEEA
IIRMYQKGMSTRDVAKFIETLLGDSYSPSTVSNITEVALEDIQEFQNRPLKKRYSVLYLDGMNIKLRRDSVENESVYIAC
GVDEEGYREILGFYVGGRENALGWQELLNDLHSRGVQEVLLGVFDGLPGLADAFKKVFPKADVQQCVIHQVRNTLNAVRK
KDQYEVAEDLKPIYKSFSKEEAHHHFEKFKEKWGSRYPRVVDSWEKNLPNLLTFLDYPSDIRAVIYTTNWIERTIKEIRK
RLKTMNSLTSPKAAEKVIFFAIQDINVRWANKKLRGFKQCQHKLQEMFELRYDC

Specific function: Required for the transposition of the insertion element [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 44208; Mature: 44208

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: PS01007 TRANSPOSASE_MUTATOR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFVQEFLQEKIELIMREEIRNFLKEQDEKNYRNGYYTRSLDTLFGQIEDLNVPRDRNG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
DFQTQLIEPYQKRDCWLEEAIIRMYQKGMSTRDVAKFIETLLGDSYSPSTVSNITEVALE
CHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
DIQEFQNRPLKKRYSVLYLDGMNIKLRRDSVENESVYIACGVDEEGYREILGFYVGGREN
HHHHHHCCCHHHHCCEEEEECCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC
ALGWQELLNDLHSRGVQEVLLGVFDGLPGLADAFKKVFPKADVQQCVIHQVRNTLNAVRK
CCCHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KDQYEVAEDLKPIYKSFSKEEAHHHFEKFKEKWGSRYPRVVDSWEKNLPNLLTFLDYPSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHCCCCH
IRAVIYTTNWIERTIKEIRKRLKTMNSLTSPKAAEKVIFFAIQDINVRWANKKLRGFKQC
HHEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCCEEEHHHHHHHHHHH
QHKLQEMFELRYDC
HHHHHHHHHHHCCC
>Mature Secondary Structure
MKSFVQEFLQEKIELIMREEIRNFLKEQDEKNYRNGYYTRSLDTLFGQIEDLNVPRDRNG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
DFQTQLIEPYQKRDCWLEEAIIRMYQKGMSTRDVAKFIETLLGDSYSPSTVSNITEVALE
CHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
DIQEFQNRPLKKRYSVLYLDGMNIKLRRDSVENESVYIACGVDEEGYREILGFYVGGREN
HHHHHHCCCHHHHCCEEEEECCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC
ALGWQELLNDLHSRGVQEVLLGVFDGLPGLADAFKKVFPKADVQQCVIHQVRNTLNAVRK
CCCHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KDQYEVAEDLKPIYKSFSKEEAHHHFEKFKEKWGSRYPRVVDSWEKNLPNLLTFLDYPSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHCCCCH
IRAVIYTTNWIERTIKEIRKRLKTMNSLTSPKAAEKVIFFAIQDINVRWANKKLRGFKQC
HHEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCCEEEHHHHHHHHHHH
QHKLQEMFELRYDC
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8195098; 11337471 [H]