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The map label for this gene is 188585017

Identifier: 188585017

GI number: 188585017

Start: 394745

End: 395107

Strand: Direct

Name: 188585017

Synonym: Nther_0378

Alternate gene names: NA

Gene position: 394745-395107 (Clockwise)

Preceding gene: 188585014

Following gene: 188585018

Centisome position: 12.47

GC content: 34.71

Gene sequence:

>363_bases
ATGATAGAGCATATAGATACCAGTAGAATTGGAGATCGTATCAGAGAAGAACGAGAACGGCTTGATCTCTCTAGAAAAAA
GCTTGGAAGATTGATAGGTGTGACAGAACATCATATCGGACAGTTAGAAAGAGGGGAGAGAAATACTAGCTTAACAACTT
TGGCTAAGATTTCTCAGGTTTTAAAGGTTTCTATTGATTCTTTTGTATTTGATACTGGAGAACCTAATAACGATGAGAAA
TCTGAAAGATCCACAGAAAGAGCAGAATTAGAAAATCTAATAGAAAGATGTTCTGATCAGGAGATAGAAGTGATTTTTGA
TATGTTGAAAGTTGTTATTCCTCATTTGAAAGTAAAGGGGTAA

Upstream 100 bases:

>100_bases
TATCAAAAATGTAACAAATAGACAATAATAATAACAGTCTATTAGATACATATTTTTTTGATATAGTAATAATAAAAGCT
ACAGCAATAGGGGGATTTTC

Downstream 100 bases:

>100_bases
TTATATTGCATTAATGTATATATAGCATCAATGTCTATTAATGATGAAGTTTACATATCATGTTAGAAACGAAGTTAACG
TCAAAATACTTATGTGATAT

Product: transcriptional regulator, XRE family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MIEHIDTSRIGDRIREERERLDLSRKKLGRLIGVTEHHIGQLERGERNTSLTTLAKISQVLKVSIDSFVFDTGEPNNDEK
SERSTERAELENLIERCSDQEIEVIFDMLKVVIPHLKVKG

Sequences:

>Translated_120_residues
MIEHIDTSRIGDRIREERERLDLSRKKLGRLIGVTEHHIGQLERGERNTSLTTLAKISQVLKVSIDSFVFDTGEPNNDEK
SERSTERAELENLIERCSDQEIEVIFDMLKVVIPHLKVKG
>Mature_120_residues
MIEHIDTSRIGDRIREERERLDLSRKKLGRLIGVTEHHIGQLERGERNTSLTTLAKISQVLKVSIDSFVFDTGEPNNDEK
SERSTERAELENLIERCSDQEIEVIFDMLKVVIPHLKVKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13837; Mature: 13837

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEHIDTSRIGDRIREERERLDLSRKKLGRLIGVTEHHIGQLERGERNTSLTTLAKISQV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHH
LKVSIDSFVFDTGEPNNDEKSERSTERAELENLIERCSDQEIEVIFDMLKVVIPHLKVKG
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIEHIDTSRIGDRIREERERLDLSRKKLGRLIGVTEHHIGQLERGERNTSLTTLAKISQV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHH
LKVSIDSFVFDTGEPNNDEKSERSTERAELENLIERCSDQEIEVIFDMLKVVIPHLKVKG
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA