| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188584969
Identifier: 188584969
GI number: 188584969
Start: 345842
End: 346735
Strand: Reverse
Name: 188584969
Synonym: Nther_0329
Alternate gene names: NA
Gene position: 346735-345842 (Counterclockwise)
Preceding gene: 188584980
Following gene: 188584968
Centisome position: 10.95
GC content: 37.81
Gene sequence:
>894_bases ATGCGCTATGTTTGTCACGACATAGCGTTAGCTTATAGTAATGAGGTGATTACAATCATGTTACAAAAAACACTAGCTTT GATTTTGGGATTAACATTAACTCTAACTTTAATTGGATGTTCTGAAGATGAAACATCGGTATTAACTATGGCAACTACAA CCAGTACTGAAGATTCGGGATTATTAGATGAATTGTTGCCAATCTTTGGAGACGAAACAGGTTATGAAGTGGATGTTATA ACTGTTGGGACTGGACAGGCTTTAGAAATTGGACGAAGTGGTGATGCGGACATTTTACTTGTTCATGCAAAGGAACTGGA AAAAGAATTCGTTAACGATGGTTACGGGACTGAACGTTTTCCTGTAATGTACAATGATTTCGTGATCTTGGGACCTACAG AGGATCCAGCGAAAGTTTCAGAAGCCAATGATTTAGACGAAGCAATGTCTTTAATCTATCAGATAGGAAAAGAAGGAGAT TCCACCTTTAGCTCAAGAGGAGATAAATCTGGGACTCATGTAAAAGAGACCACCCTTTGGGAAGAGTTCCAATTAGACAT TGAGGGAAAAGAATGGTATGATTCCTTAGGTCAAGGTATGGGAGATACTTTAATTGCGGCTAACGAAATGAGAGCTTATA GTATTTCAGATAGAGGGACTTTTCTTTCTATGGAAGATAGTATAGAAAATCTCCAAATTGTCTTTGAAGATGATGATATG CTTACAAACCCGTACGGAATTATCCCAGTAAATCCTGACACCCATGAAAATGTTAATTACGAAGCAGCTAATGAGCTGGT AGAATTCTTTGTGAGAGATGATATTCAGCAAAAAATTTCCGAGTTTGGAATTGAAGAGTACGGCCAACCTTTATTTTTTC CGAATACCGACTAG
Upstream 100 bases:
>100_bases TGTTGATCTAGTTTATCATTACAACATATTTTTACAAAAATTTTAATATAGTTAATTATAAAAATTGCAGGATTTTAAAT TTTTATATAGAATAATTATC
Downstream 100 bases:
>100_bases ACACTCATACTTTTATGGAGGGACAATATGGATGCATTTATATCCGGACTTTCAGAAGCTATAGAGTTATTAATCAGTTT TGACCCTTATGTGATGAATA
Product: extracellular solute-binding protein family 1
Products: NA
Alternate protein names: Signal Peptide Protein; TUNGstate ABC Transporter Permease; Molybdate Or TUNGstate Transport; TUNGstate ABC Transporter Permease-Like Protein; Signal Peptide; TUNGstate Abc Transporter Permease; ABC-Type Transport Protein Permease Component; ABC Transporter; Basic Organic Compound ABC-Transporter; ABC Transporter Permease Protein; ABC TUNGstate Transporter Permease Component; ABC-Type Transport System Permease Component; ABC Transporter Periplasmic Protein; ABC-Type TUNGstate Transport System Permease Component-Like; Periplasmic Protein
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MRYVCHDIALAYSNEVITIMLQKTLALILGLTLTLTLIGCSEDETSVLTMATTTSTEDSGLLDELLPIFGDETGYEVDVI TVGTGQALEIGRSGDADILLVHAKELEKEFVNDGYGTERFPVMYNDFVILGPTEDPAKVSEANDLDEAMSLIYQIGKEGD STFSSRGDKSGTHVKETTLWEEFQLDIEGKEWYDSLGQGMGDTLIAANEMRAYSISDRGTFLSMEDSIENLQIVFEDDDM LTNPYGIIPVNPDTHENVNYEAANELVEFFVRDDIQQKISEFGIEEYGQPLFFPNTD
Sequences:
>Translated_297_residues MRYVCHDIALAYSNEVITIMLQKTLALILGLTLTLTLIGCSEDETSVLTMATTTSTEDSGLLDELLPIFGDETGYEVDVI TVGTGQALEIGRSGDADILLVHAKELEKEFVNDGYGTERFPVMYNDFVILGPTEDPAKVSEANDLDEAMSLIYQIGKEGD STFSSRGDKSGTHVKETTLWEEFQLDIEGKEWYDSLGQGMGDTLIAANEMRAYSISDRGTFLSMEDSIENLQIVFEDDDM LTNPYGIIPVNPDTHENVNYEAANELVEFFVRDDIQQKISEFGIEEYGQPLFFPNTD >Mature_297_residues MRYVCHDIALAYSNEVITIMLQKTLALILGLTLTLTLIGCSEDETSVLTMATTTSTEDSGLLDELLPIFGDETGYEVDVI TVGTGQALEIGRSGDADILLVHAKELEKEFVNDGYGTERFPVMYNDFVILGPTEDPAKVSEANDLDEAMSLIYQIGKEGD STFSSRGDKSGTHVKETTLWEEFQLDIEGKEWYDSLGQGMGDTLIAANEMRAYSISDRGTFLSMEDSIENLQIVFEDDDM LTNPYGIIPVNPDTHENVNYEAANELVEFFVRDDIQQKISEFGIEEYGQPLFFPNTD
Specific function: Unknown
COG id: COG2998
COG function: function code H; ABC-type tungstate transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33017; Mature: 33017
Theoretical pI: Translated: 3.73; Mature: 3.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYVCHDIALAYSNEVITIMLQKTLALILGLTLTLTLIGCSEDETSVLTMATTTSTEDSG CCEEHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEEECCCCCCC LLDELLPIFGDETGYEVDVITVGTGQALEIGRSGDADILLVHAKELEKEFVNDGYGTERF HHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCCEEEEEHHHHHHHHHCCCCCCCCC PVMYNDFVILGPTEDPAKVSEANDLDEAMSLIYQIGKEGDSTFSSRGDKSGTHVKETTLW CEEECCEEEECCCCCCCHHCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCEEHHHHCE EEFQLDIEGKEWYDSLGQGMGDTLIAANEMRAYSISDRGTFLSMEDSIENLQIVFEDDDM EEEEEECCCHHHHHHHCCCCCCEEEEECCCEEEEECCCCCEEEECCCCCEEEEEECCCCE LTNPYGIIPVNPDTHENVNYEAANELVEFFVRDDIQQKISEFGIEEYGQPLFFPNTD EECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCC >Mature Secondary Structure MRYVCHDIALAYSNEVITIMLQKTLALILGLTLTLTLIGCSEDETSVLTMATTTSTEDSG CCEEHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEEECCCCCCC LLDELLPIFGDETGYEVDVITVGTGQALEIGRSGDADILLVHAKELEKEFVNDGYGTERF HHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCCEEEEEHHHHHHHHHCCCCCCCCC PVMYNDFVILGPTEDPAKVSEANDLDEAMSLIYQIGKEGDSTFSSRGDKSGTHVKETTLW CEEECCEEEECCCCCCCHHCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCEEHHHHCE EEFQLDIEGKEWYDSLGQGMGDTLIAANEMRAYSISDRGTFLSMEDSIENLQIVFEDDDM EEEEEECCCHHHHHHHCCCCCCEEEEECCCEEEEECCCCCEEEECCCCCEEEEEECCCCE LTNPYGIIPVNPDTHENVNYEAANELVEFFVRDDIQQKISEFGIEEYGQPLFFPNTD EECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA