Click here to switch to the map view.

The map label for this gene is yxaH [H]

Identifier: 188584926

GI number: 188584926

Start: 297993

End: 299222

Strand: Direct

Name: yxaH [H]

Synonym: Nther_0285

Alternate gene names: 188584926

Gene position: 297993-299222 (Clockwise)

Preceding gene: 188584925

Following gene: 188584927

Centisome position: 9.41

GC content: 36.34

Gene sequence:

>1230_bases
ATGGTTCAGAGACACGGCGCTCCTACTGATCCTAATAAGCGAGTTGAAATAGTAGATATCATTCGCGGGTTTGCGCTCTT
TGGTGTACTTTTAGTGAATATGACTCTGTTTAAATCCACCTTATTTTATTGGGAGCAAATACCCCATTATTCCGGGGATA
TCAATGTATTCTTTGGTTGGATGATTGAACTTCTGGCAACTGGTAAGTTTTATCCTATTTTTTCGTTTTTATTTGGTTTG
GGTTTTTATTTTTTTGTCAGCAGGGCCCAGAAAAAAGGGTTAAAGGTAGGTAAATTATACCGGCGCAGAATCTTGGGATT
ATTAATTTTTGGATTAATTCATTTAGTATTTATCTGGTCAGGTGATATACTTCATCTCTATTCTGTCGGTGGTTTGTTTT
TACTTGTATTCAGTACCATGTCGGATAAAACTATCAAAAAACTGATGGTTTTCTTTTTTTGTCTTGCTGTTATCATTCAG
GGAGGAATTGTTTTCGCTGAAACCCTAACTGCAGAAGAGGATTTAACTGCTGAAATAGATCCTCGTGAAAAAAGGTTGCA
GCTAAAAGAAGATGCAACAGGGGTCTATCAGGAGGGAGATTTTCTAGATATTTTAAGGTTTAGAGTAGTTAATGAAGTGC
CTTATGTTATGTTAAATATACTTTTGAGTTTACCAGATATTTTATTTTTATTTCTGCTGGGCTTATATGCTGGTAGAAAG
AAAATTTTTATGAAAATCGGTGAATATAGACAAAAATTTCGCTGGACTCTTAATAGAACACTGCCTATTGGGGTGATTGG
AACCCTTGTATATTATTTAATAATGGTTGATTCTATTGGCTTGGGCCCAATAGCAGGAGACGTTTTAGCTGAAATGATAT
TTTATGTAGCTTCAATATCTTTGGCAGTGACTTACATTTGTAGCTTAAGCTTGCTAAGCCAATATAATTTCCCTATGAGA
ATACTGTCTCCTCTTTCCAATGTTGGCAAAATGGCCTTAACTAATTATCTTACCCAGTCCCTGATCAGTGTGTCGATTTT
CTATGGCTATGGAGCGGGTTTGTTTGAACAGGTGAGTGTTACCGGAGGAGTCGCTATAACAGTAGGAATTTACACATTAC
AAATGATCTGGAGTTGGATTTGGATGTCTAGGTTTAGATTTGGGCCCTTTGAGTGGTTGTGGAGAAGTTTTACCTATCAA
GAATTTCCGCCTATTAAATTATCATCGTAA

Upstream 100 bases:

>100_bases
TGAGTTTTGATTAAATATGATTATGTTATAATATGATAGTAGTTAAAGTATGGAGTTTTTAAACGAAATCTGTCAGTGAA
TTGTAAAAGGAGAGTTACAA

Downstream 100 bases:

>100_bases
TATAATTCTGCTGTCGCCTTAATTAATATAATTGAAAATCCTATAAATAGATGATCTCTATGGGAGGTATTATTATGAAG
AAAAAAATACGCCAGGGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MVQRHGAPTDPNKRVEIVDIIRGFALFGVLLVNMTLFKSTLFYWEQIPHYSGDINVFFGWMIELLATGKFYPIFSFLFGL
GFYFFVSRAQKKGLKVGKLYRRRILGLLIFGLIHLVFIWSGDILHLYSVGGLFLLVFSTMSDKTIKKLMVFFFCLAVIIQ
GGIVFAETLTAEEDLTAEIDPREKRLQLKEDATGVYQEGDFLDILRFRVVNEVPYVMLNILLSLPDILFLFLLGLYAGRK
KIFMKIGEYRQKFRWTLNRTLPIGVIGTLVYYLIMVDSIGLGPIAGDVLAEMIFYVASISLAVTYICSLSLLSQYNFPMR
ILSPLSNVGKMALTNYLTQSLISVSIFYGYGAGLFEQVSVTGGVAITVGIYTLQMIWSWIWMSRFRFGPFEWLWRSFTYQ
EFPPIKLSS

Sequences:

>Translated_409_residues
MVQRHGAPTDPNKRVEIVDIIRGFALFGVLLVNMTLFKSTLFYWEQIPHYSGDINVFFGWMIELLATGKFYPIFSFLFGL
GFYFFVSRAQKKGLKVGKLYRRRILGLLIFGLIHLVFIWSGDILHLYSVGGLFLLVFSTMSDKTIKKLMVFFFCLAVIIQ
GGIVFAETLTAEEDLTAEIDPREKRLQLKEDATGVYQEGDFLDILRFRVVNEVPYVMLNILLSLPDILFLFLLGLYAGRK
KIFMKIGEYRQKFRWTLNRTLPIGVIGTLVYYLIMVDSIGLGPIAGDVLAEMIFYVASISLAVTYICSLSLLSQYNFPMR
ILSPLSNVGKMALTNYLTQSLISVSIFYGYGAGLFEQVSVTGGVAITVGIYTLQMIWSWIWMSRFRFGPFEWLWRSFTYQ
EFPPIKLSS
>Mature_409_residues
MVQRHGAPTDPNKRVEIVDIIRGFALFGVLLVNMTLFKSTLFYWEQIPHYSGDINVFFGWMIELLATGKFYPIFSFLFGL
GFYFFVSRAQKKGLKVGKLYRRRILGLLIFGLIHLVFIWSGDILHLYSVGGLFLLVFSTMSDKTIKKLMVFFFCLAVIIQ
GGIVFAETLTAEEDLTAEIDPREKRLQLKEDATGVYQEGDFLDILRFRVVNEVPYVMLNILLSLPDILFLFLLGLYAGRK
KIFMKIGEYRQKFRWTLNRTLPIGVIGTLVYYLIMVDSIGLGPIAGDVLAEMIFYVASISLAVTYICSLSLLSQYNFPMR
ILSPLSNVGKMALTNYLTQSLISVSIFYGYGAGLFEQVSVTGGVAITVGIYTLQMIWSWIWMSRFRFGPFEWLWRSFTYQ
EFPPIKLSS

Specific function: Involved in transport (Potential) [H]

COG id: COG2311

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007349 [H]

Pfam domain/function: PF04235 DUF418 [H]

EC number: NA

Molecular weight: Translated: 46792; Mature: 46792

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure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CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377 [H]