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The map label for this gene is bioY [H]

Identifier: 188584924

GI number: 188584924

Start: 296481

End: 297020

Strand: Direct

Name: bioY [H]

Synonym: Nther_0283

Alternate gene names: 188584924

Gene position: 296481-297020 (Clockwise)

Preceding gene: 188584920

Following gene: 188584925

Centisome position: 9.37

GC content: 40.93

Gene sequence:

>540_bases
ATGAATAGTAATATCAGAGATTTAGTAGTTATTTCCTTATTTGCTGCTGTTACTGGTGTACTTTCTTATGTTTATGTACC
TATTAGCCCTGTACCGGTGACGGGCCAAACAATGGGTGTGATGTTGTCAGGGGCTTTATTAGGACCTAAACGTGGGTTTA
TAAGTCAGGTGGTCTATCTATTGTTGGGAGTTGTAGGAATGCCGGTTTTTGCTGGTGGTATGGGAGGAGTGGCTGTGTTA
TTTGGTGCCACTGGTGGTTATCTTTGGGCTTATCCCTTTGCTGCTTTTATTATAGGTTACATAGTAGAGAAGGGAGATAG
ATACACAGGAATTACTTACTGGTTGGTTCTAGTACTTGCCTTACTCACAGGTGGTGTATTTATGATTTATACTACCGGAG
TATTACAACTGGCTTTGGTAACGCAGGTTCCTATTGGAGTTGCAGTTTTAGAAGGTGCAGTTCCTTTCTTGCTTGGAGAT
ATAGTTAAAATTACAGCCAGTGCCTTTGTGACTAAAAGTTGTCGTACACTGTCATTGTGA

Upstream 100 bases:

>100_bases
GAGAGTTGTAATTATAATATATTTGATTTATTGATTTTATTTATTAGTTTTTAGCGTTAGCATCTATTTTATATTTCTAT
TTGGGAAGGAGTGCATTCTT

Downstream 100 bases:

>100_bases
ATAAATTTGTTTATTCAGGGAATATACACGAAAAAGCTATATTTTTGGCAGGATACAAAGTTGAATTATAGAACTTTATA
CTAACTGGTACTTGTTGTCA

Product: BioY protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MNSNIRDLVVISLFAAVTGVLSYVYVPISPVPVTGQTMGVMLSGALLGPKRGFISQVVYLLLGVVGMPVFAGGMGGVAVL
FGATGGYLWAYPFAAFIIGYIVEKGDRYTGITYWLVLVLALLTGGVFMIYTTGVLQLALVTQVPIGVAVLEGAVPFLLGD
IVKITASAFVTKSCRTLSL

Sequences:

>Translated_179_residues
MNSNIRDLVVISLFAAVTGVLSYVYVPISPVPVTGQTMGVMLSGALLGPKRGFISQVVYLLLGVVGMPVFAGGMGGVAVL
FGATGGYLWAYPFAAFIIGYIVEKGDRYTGITYWLVLVLALLTGGVFMIYTTGVLQLALVTQVPIGVAVLEGAVPFLLGD
IVKITASAFVTKSCRTLSL
>Mature_179_residues
MNSNIRDLVVISLFAAVTGVLSYVYVPISPVPVTGQTMGVMLSGALLGPKRGFISQVVYLLLGVVGMPVFAGGMGGVAVL
FGATGGYLWAYPFAAFIIGYIVEKGDRYTGITYWLVLVLALLTGGVFMIYTTGVLQLALVTQVPIGVAVLEGAVPFLLGD
IVKITASAFVTKSCRTLSL

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 18716; Mature: 18716

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNIRDLVVISLFAAVTGVLSYVYVPISPVPVTGQTMGVMLSGALLGPKRGFISQVVYL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH
LLGVVGMPVFAGGMGGVAVLFGATGGYLWAYPFAAFIIGYIVEKGDRYTGITYWLVLVLA
HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LLTGGVFMIYTTGVLQLALVTQVPIGVAVLEGAVPFLLGDIVKITASAFVTKSCRTLSL
HHHCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
>Mature Secondary Structure
MNSNIRDLVVISLFAAVTGVLSYVYVPISPVPVTGQTMGVMLSGALLGPKRGFISQVVYL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH
LLGVVGMPVFAGGMGGVAVLFGATGGYLWAYPFAAFIIGYIVEKGDRYTGITYWLVLVLA
HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LLTGGVFMIYTTGVLQLALVTQVPIGVAVLEGAVPFLLGDIVKITASAFVTKSCRTLSL
HHHCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]