| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188584914
Identifier: 188584914
GI number: 188584914
Start: 287876
End: 288757
Strand: Direct
Name: 188584914
Synonym: Nther_0273
Alternate gene names: NA
Gene position: 287876-288757 (Clockwise)
Preceding gene: 188584912
Following gene: 188584919
Centisome position: 9.09
GC content: 33.45
Gene sequence:
>882_bases ATGTTATTACAGAAAAAATTTGTAAAAGAAACTATCTTATTTGTTGCCGTAATAATCTTGTTGTTTTCTTTTTTAGTATG GTATGGGAATTGGAATTTAGAGTTGCTATTTAACGAAAAAGTAATTGATTTAGAGGGAGACATGACGACTTCAGATGAGC ATTTAACTATTAAGCCTAGAGAAATGATCATAGATCACTCTAAAATCACTATATTAGTTGATTATCAAGTAAATCCAGAG TTAAGACAATTAGACCTTGAATTTACTACTCCTCCTCGACTTTTATTAGAAAAGGAAAACAAAGTAGATAATAATAATTC GACGCTTACAATGCCTAGTGGAGCTTATCCTGATTCATCTGAAAAAATAGAGACAATTGATGAGAGCTATTTTAAGTACG AGTATTGGTATCAAAATTTTCCGTACGAACTTGAACAAGACCTAACTCTAATTTTAGATAGAACCTACATGAGTAAAGAT CACAGTCAAGAAATTTCTGTGGATCCTGGTGATAATGTCGAAGTTGAGATATCAGACATAGGGAAATATAAGGGGAAGTT AAAAGAACCTCAAAAAACTGACGAAGGTTTAGATACAATAACTTTTGAAGGTGAGATACTTTCAGATCAATTTGAGTATG GCTTTAGAGTGCGAGACTATTTAATTAGCATGGTAAACGGTGAAGAGGTAAGACCTACAGGTGCTGGCGGTGGTGGCAGC CCCGGTTCTAATTCCAATTATCAATTTGAACGTGAGTATAGAATAGAAGATAAAATGTTTTGGGAAGGAGATTTAGTACT ACAAGTGGGAAGAATAAGAGTACTTATTGGAAATAGGTTTGAATCCCCTTACATGGATTTAAACATTACCGAAGAATTAT GA
Upstream 100 bases:
>100_bases TCAAGTGTCCTGACAATACTATTACAAATTTTAGTATAAAAATTATTTTTATAAAGGGGAATTTAAAAATATCTCGAAAC AGAGTGAAGGGGGGGATTAA
Downstream 100 bases:
>100_bases TGTTTTAGTTATGGGAATTATGCTATTGAACTGATTAAAAATATTATATATAGAATTAATATCACAATTGCATCAATTCC CAGATAAAAATAGCTTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MLLQKKFVKETILFVAVIILLFSFLVWYGNWNLELLFNEKVIDLEGDMTTSDEHLTIKPREMIIDHSKITILVDYQVNPE LRQLDLEFTTPPRLLLEKENKVDNNNSTLTMPSGAYPDSSEKIETIDESYFKYEYWYQNFPYELEQDLTLILDRTYMSKD HSQEISVDPGDNVEVEISDIGKYKGKLKEPQKTDEGLDTITFEGEILSDQFEYGFRVRDYLISMVNGEEVRPTGAGGGGS PGSNSNYQFEREYRIEDKMFWEGDLVLQVGRIRVLIGNRFESPYMDLNITEEL
Sequences:
>Translated_293_residues MLLQKKFVKETILFVAVIILLFSFLVWYGNWNLELLFNEKVIDLEGDMTTSDEHLTIKPREMIIDHSKITILVDYQVNPE LRQLDLEFTTPPRLLLEKENKVDNNNSTLTMPSGAYPDSSEKIETIDESYFKYEYWYQNFPYELEQDLTLILDRTYMSKD HSQEISVDPGDNVEVEISDIGKYKGKLKEPQKTDEGLDTITFEGEILSDQFEYGFRVRDYLISMVNGEEVRPTGAGGGGS PGSNSNYQFEREYRIEDKMFWEGDLVLQVGRIRVLIGNRFESPYMDLNITEEL >Mature_293_residues MLLQKKFVKETILFVAVIILLFSFLVWYGNWNLELLFNEKVIDLEGDMTTSDEHLTIKPREMIIDHSKITILVDYQVNPE LRQLDLEFTTPPRLLLEKENKVDNNNSTLTMPSGAYPDSSEKIETIDESYFKYEYWYQNFPYELEQDLTLILDRTYMSKD HSQEISVDPGDNVEVEISDIGKYKGKLKEPQKTDEGLDTITFEGEILSDQFEYGFRVRDYLISMVNGEEVRPTGAGGGGS PGSNSNYQFEREYRIEDKMFWEGDLVLQVGRIRVLIGNRFESPYMDLNITEEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34116; Mature: 34116
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLQKKFVKETILFVAVIILLFSFLVWYGNWNLELLFNEKVIDLEGDMTTSDEHLTIKPR CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCCCCCEEEECHH EMIIDHSKITILVDYQVNPELRQLDLEFTTPPRLLLEKENKVDNNNSTLTMPSGAYPDSS HHEEECCEEEEEEEEECCCCHHEEEEEECCCCCEEEECCCCCCCCCCEEEECCCCCCCCC EKIETIDESYFKYEYWYQNFPYELEQDLTLILDRTYMSKDHSQEISVDPGDNVEVEISDI CHHHHHHHHHEEEEEEECCCCCCCCCCEEEEEEHHHHCCCCCCEEECCCCCCCEEEEECC GKYKGKLKEPQKTDEGLDTITFEGEILSDQFEYGFRVRDYLISMVNGEEVRPTGAGGGGS CCCCCCCCCCCCCCCCCEEEEECCEEECCHHHCCHHHHHHHHHHCCCCEECCCCCCCCCC PGSNSNYQFEREYRIEDKMFWEGDLVLQVGRIRVLIGNRFESPYMDLNITEEL CCCCCCEEEEEEEECCCEEEECCCEEEEEEEEEEEECCCCCCCCEEEEECCCC >Mature Secondary Structure MLLQKKFVKETILFVAVIILLFSFLVWYGNWNLELLFNEKVIDLEGDMTTSDEHLTIKPR CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCCCCCEEEECHH EMIIDHSKITILVDYQVNPELRQLDLEFTTPPRLLLEKENKVDNNNSTLTMPSGAYPDSS HHEEECCEEEEEEEEECCCCHHEEEEEECCCCCEEEECCCCCCCCCCEEEECCCCCCCCC EKIETIDESYFKYEYWYQNFPYELEQDLTLILDRTYMSKDHSQEISVDPGDNVEVEISDI CHHHHHHHHHEEEEEEECCCCCCCCCCEEEEEEHHHHCCCCCCEEECCCCCCCEEEEECC GKYKGKLKEPQKTDEGLDTITFEGEILSDQFEYGFRVRDYLISMVNGEEVRPTGAGGGGS CCCCCCCCCCCCCCCCCEEEEECCEEECCHHHCCHHHHHHHHHHCCCCEECCCCCCCCCC PGSNSNYQFEREYRIEDKMFWEGDLVLQVGRIRVLIGNRFESPYMDLNITEEL CCCCCCEEEEEEEECCCEEEECCCEEEEEEEEEEEECCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA